Miyakogusa Predicted Gene

Lj3g3v2848950.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2848950.1 CUFF.44800.1
         (287 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g091185.1 | adaptin ear-binding coat-associated protein 1 ...   432   e-121
Medtr1g069765.1 | adaptin ear-binding coat-associated protein 1 ...   138   5e-33

>Medtr2g091185.1 | adaptin ear-binding coat-associated protein 1 |
           HC | chr2:39329731-39325602 | 20130731
          Length = 287

 Score =  432 bits (1110), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 212/271 (78%), Positives = 226/271 (83%)

Query: 1   MEKEENKPDIENSGGETDDTEPIELVLFQVPECYVYIIPPRKSAASYRADEWDVNKWAWE 60
           MEKEENKPDI+  G E +DTEPIELVLFQVPECYVYIIPPR SAASYRADEWDVNKWAWE
Sbjct: 1   MEKEENKPDIQKIGNEIEDTEPIELVLFQVPECYVYIIPPRMSAASYRADEWDVNKWAWE 60

Query: 61  GILKVVSKGEECIIKLEDKNTGELYARAFLRNGEPHPVEAVIDSSRYFVLRIEENIGGRL 120
           GILKVVSKGEECIIKLEDKNTGELYARAFLRNGEPHPVEAVIDSSRYFVLRIEENI GRL
Sbjct: 61  GILKVVSKGEECIIKLEDKNTGELYARAFLRNGEPHPVEAVIDSSRYFVLRIEENIDGRL 120

Query: 121 RHAFIGVGFRERTEAYDFQAALHDHMKYLNKKKTAEEMEQHYQQSSSVDYSLKEGETLVL 180
           RHAFIG+GFRERTEAYDFQAALHDHMKYL+KKKTAEEMEQHYQQSSSVDYSLKEGETLVL
Sbjct: 121 RHAFIGIGFRERTEAYDFQAALHDHMKYLDKKKTAEEMEQHYQQSSSVDYSLKEGETLVL 180

Query: 181 QLKNNRSGPNVKSKFFEQGLNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNSPTNSP 240
           Q+KNNRSG NVKSKFFEQG NN                              Q SPT+SP
Sbjct: 181 QIKNNRSGGNVKSKFFEQGANNSSEEKSEKKESIPCIKLPPPPPSPGSPVTPQKSPTDSP 240

Query: 241 TEFSPEKTSKLETSKTIQEDAEGEKPPENQS 271
           T+ S EK++++ETSK ++E+ E EK PENQS
Sbjct: 241 TKLSLEKSAEVETSKIVKEETEHEKSPENQS 271


>Medtr1g069765.1 | adaptin ear-binding coat-associated protein 1 |
           HC | chr1:30432950-30430450 | 20130731
          Length = 279

 Score =  138 bits (348), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 107/175 (61%), Gaps = 10/175 (5%)

Query: 21  EPIELVLFQVPECYVYIIPPRKSAASYRADEWDVNKWAWEGILKVVSKGEECIIKLEDKN 80
           E  +  L  V E  VY IPPR ++  Y+  EW  +   W G L+VVS+ + C I+LED N
Sbjct: 8   EGFDHTLLVVREVAVYKIPPRTTSGGYKCGEWLQSDKIWSGRLRVVSRRDRCEIRLEDPN 67

Query: 81  TGELYARAFLRNGEPH-PVEAVIDSSRYFVLRIEENIGGRLRHAFIGVGFRERTEAYDFQ 139
           +G+L+A  F+  G+    VE V+DSSRYFVL+IE+   G+ +HAFIG+GF ER EA+DF 
Sbjct: 68  SGDLFAACFVFPGQREGSVEPVLDSSRYFVLKIED---GQGKHAFIGLGFAERNEAFDFN 124

Query: 140 AALHDHMKYLNKKKTAEEMEQHYQQSSSVD------YSLKEGETLVLQLKNNRSG 188
            AL DH KY+ ++   E  +    + S +D      + LKEGET+ + +K+  +G
Sbjct: 125 VALSDHEKYVRREHDKESGDADASEDSQIDIHPAVNHRLKEGETIRINVKHKAAG 179