Miyakogusa Predicted Gene
- Lj3g3v2838500.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2838500.1 gi|1370200|emb|Z73962.1|.path1.1
(196 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g090875.1 | Rho-like GTP-binding protein | HC | chr2:39006... 342 2e-94
Medtr4g088055.1 | Rho-like GTP-binding protein | HC | chr4:34676... 318 2e-87
Medtr4g073250.1 | Rho-like GTP-binding protein | HC | chr4:27704... 314 4e-86
Medtr8g075240.1 | Rho-like GTP-binding protein | HC | chr8:31801... 310 5e-85
Medtr5g022600.3 | Rho-like GTP-binding protein | HC | chr5:89135... 306 7e-84
Medtr5g022600.2 | Rho-like GTP-binding protein | HC | chr5:89135... 306 7e-84
Medtr5g022600.1 | Rho-like GTP-binding protein | HC | chr5:89135... 306 7e-84
Medtr3g078260.1 | Rho-like GTP-binding protein | HC | chr3:35252... 295 2e-80
Medtr6g087980.1 | Rho-like GTP-binding protein | HC | chr6:33118... 290 4e-79
Medtr3g078260.2 | Rho-like GTP-binding protein | HC | chr3:35252... 201 5e-52
Medtr7g103070.1 | RAB GTPase-like protein C2B | HC | chr7:414408... 93 1e-19
Medtr1g115325.1 | RAB GTPase-like protein A5B | HC | chr1:520310... 89 3e-18
Medtr1g068740.1 | RAB GTPase-like protein A5B | HC | chr1:293521... 89 3e-18
Medtr1g068730.1 | RAB GTPase-like protein A5B | HC | chr1:293444... 88 4e-18
Medtr7g100020.2 | RAB GTPase-like protein A5B | HC | chr7:401949... 88 6e-18
Medtr7g100020.1 | RAB GTPase-like protein A5B | HC | chr7:401949... 88 6e-18
Medtr2g027660.1 | RAB GTPase-like protein C2B | HC | chr2:101320... 87 1e-17
Medtr6g021790.1 | small GTPase family RAB protein | HC | chr6:75... 86 2e-17
Medtr8g093740.1 | RAB GTPase-like protein A5B | HC | chr8:392232... 86 3e-17
Medtr8g093740.2 | RAB GTPase-like protein A5B | HC | chr8:392232... 86 3e-17
Medtr3g096350.1 | small GTPase family RAB protein | HC | chr3:44... 85 4e-17
Medtr1g094220.4 | small GTPase family RAB protein | HC | chr1:42... 85 5e-17
Medtr1g094220.1 | small GTPase family RAB protein | HC | chr1:42... 84 6e-17
Medtr1g094220.5 | small GTPase family RAB protein | HC | chr1:42... 84 7e-17
Medtr1g094220.2 | small GTPase family RAB protein | HC | chr1:42... 84 7e-17
Medtr1g094220.3 | small GTPase family RAB protein | HC | chr1:42... 84 9e-17
Medtr1g062760.1 | RAB GTPase-like protein A5B | HC | chr1:274958... 84 9e-17
Medtr4g098950.1 | RAB GTPase-like protein B1C | HC | chr4:408810... 83 1e-16
Medtr4g063160.2 | RAB GTPase-like protein A5B | HC | chr4:233869... 82 3e-16
Medtr4g063160.1 | RAB GTPase-like protein A5B | HC | chr4:233872... 82 3e-16
Medtr8g006970.2 | RAB GTPase-like protein A5D | HC | chr8:114871... 82 5e-16
Medtr1g029450.1 | small GTPase family RAB protein | HC | chr1:10... 81 5e-16
Medtr8g006970.1 | RAB GTPase-like protein A5D | HC | chr8:114796... 81 6e-16
Medtr2g102060.1 | small GTPase family RAB protein | HC | chr2:43... 81 7e-16
Medtr8g031870.1 | RAB GTPase-like protein A1D | HC | chr8:119315... 81 7e-16
Medtr5g013900.1 | RAB GTPase-like protein B1C | HC | chr5:458101... 81 8e-16
Medtr8g090215.1 | RAB GTPase-like protein B1C | HC | chr8:378544... 80 1e-15
Medtr8g103550.1 | RAB GTPase-like protein A5B | HC | chr8:435755... 80 2e-15
Medtr3g087160.1 | RAB GTPase-like protein B1C | HC | chr3:395302... 79 2e-15
Medtr7g081700.1 | RAB GTPase-like protein B1C | HC | chr7:312287... 79 2e-15
Medtr8g089985.1 | RAB GTPase-like protein A1D | HC | chr8:376274... 79 3e-15
Medtr1g068730.2 | RAB GTPase-like protein A5B | HC | chr1:293444... 78 5e-15
Medtr8g031660.1 | RAB GTPase-like protein A5B | LC | chr8:119027... 78 7e-15
Medtr2g005500.1 | RAB GTPase-like protein B1C | HC | chr2:184631... 78 7e-15
Medtr2g083860.1 | RAB GTPase-like protein A1D | HC | chr2:351953... 77 7e-15
Medtr1g068740.2 | RAB GTPase-like protein A5B | HC | chr1:293521... 77 1e-14
Medtr3g069510.1 | RAB GTPase-like protein A1D | HC | chr3:310902... 76 2e-14
Medtr0262s0050.1 | RAB GTPase-like protein A1D | HC | scaffold02... 76 2e-14
Medtr2g096550.1 | RAB GTPase-like protein A1D | HC | chr2:412383... 76 2e-14
Medtr3g086980.1 | RAB GTPase-like protein A1D | HC | chr3:394347... 75 3e-14
Medtr1g052475.1 | RAB GTPase-like protein A1D | HC | chr1:213364... 75 3e-14
Medtr2g005510.1 | RAB GTPase-like protein A1D | HC | chr2:188783... 75 3e-14
Medtr2g014990.1 | RAB GTPase-like protein A1D | HC | chr2:437551... 75 4e-14
Medtr7g051940.1 | RAB GTPase-like protein A1D | HC | chr7:182342... 75 4e-14
Medtr8g031830.1 | small GTPase family RAB protein | HC | chr8:11... 75 4e-14
Medtr4g079350.1 | RAB GTPase-like protein C2B | HC | chr4:306486... 75 4e-14
Medtr8g031680.1 | RAB GTPase-like protein C2B | LC | chr8:119074... 75 5e-14
Medtr4g088090.1 | RAB GTPase-like protein A1D | HC | chr4:346993... 75 5e-14
Medtr8g092020.1 | RAB GTPase-like protein A1D | HC | chr8:384078... 74 1e-13
Medtr1g097420.1 | RAB GTPase-like protein A1D | HC | chr1:439465... 73 1e-13
Medtr2g075950.1 | RAB GTPase-like protein A1D | HC | chr2:317892... 73 1e-13
Medtr4g064897.1 | RAB GTPase-like protein A1D | HC | chr4:242499... 73 2e-13
Medtr8g027220.1 | Ras-related small GTP-binding family protein |... 73 2e-13
Medtr3g064390.1 | small GTPase family RAB protein | HC | chr3:28... 73 2e-13
Medtr7g117910.1 | small GTPase family RAB protein | HC | chr7:48... 73 2e-13
Medtr7g405790.1 | RAB GTPase-like protein A1D | HC | chr7:264041... 72 3e-13
Medtr5g076590.1 | small GTPase family RAB protein | HC | chr5:32... 72 3e-13
Medtr2g101890.1 | RAB GTPase-like protein A1D | HC | chr2:438414... 72 3e-13
Medtr1g090717.1 | RAB GTPase-like protein A5B | HC | chr1:407164... 71 6e-13
Medtr1g078200.1 | RAB GTPase-like protein C2B | HC | chr1:349987... 70 1e-12
Medtr4g012940.1 | RAB GTPase-like protein A1D | HC | chr4:346608... 70 1e-12
Medtr8g036220.1 | RAB GTPase-like protein A1D | HC | chr8:133937... 70 2e-12
Medtr3g064390.2 | small GTPase family RAB protein | HC | chr3:28... 69 3e-12
Medtr6g079550.1 | RAB GTPase-like protein A1D | HC | chr6:300135... 69 3e-12
Medtr2g090865.1 | RAB GTPase-like protein A1D | HC | chr2:390019... 68 5e-12
Medtr4g069850.1 | RAB GTPase-like protein A1D | HC | chr4:262765... 68 6e-12
Medtr3g096350.2 | small GTPase family RAB protein | HC | chr3:44... 67 8e-12
Medtr3g096350.3 | small GTPase family RAB protein | HC | chr3:44... 67 2e-11
Medtr8g107070.1 | RAB GTPase-like protein A2D | HC | chr8:452338... 66 2e-11
Medtr7g103070.2 | RAB GTPase-like protein C2B | HC | chr7:414402... 65 4e-11
Medtr1g097420.2 | RAB GTPase-like protein A1D | HC | chr1:439465... 65 4e-11
Medtr8g093740.5 | RAB GTPase-like protein A5B | HC | chr8:392232... 65 4e-11
Medtr8g093740.4 | RAB GTPase-like protein A5B | HC | chr8:392234... 65 4e-11
Medtr8g093740.3 | RAB GTPase-like protein A5B | HC | chr8:392232... 65 4e-11
Medtr7g094810.7 | Rho GTPase | HC | chr7:37834516-37844546 | 201... 61 8e-10
Medtr7g094810.2 | Rho GTPase | HC | chr7:37834516-37844542 | 201... 61 8e-10
Medtr7g094810.4 | Rho GTPase | HC | chr7:37834516-37844542 | 201... 61 8e-10
Medtr7g094810.6 | Rho GTPase | HC | chr7:37834516-37843869 | 201... 61 8e-10
Medtr7g094810.1 | Rho GTPase | HC | chr7:37834516-37844546 | 201... 61 8e-10
Medtr7g094810.3 | Rho GTPase | HC | chr7:37834516-37844546 | 201... 61 8e-10
Medtr7g094810.5 | Rho GTPase | HC | chr7:37834516-37843812 | 201... 61 8e-10
Medtr1g082870.1 | Rho GTPase-like protein | HC | chr1:36871248-3... 59 4e-09
Medtr1g072280.1 | Rho GTPase | HC | chr1:32084987-32076339 | 201... 58 6e-09
Medtr3g107707.1 | GTP-binding nuclear Ran-like protein | HC | ch... 57 9e-09
Medtr3g107717.1 | GTP-binding nuclear Ran-like protein | HC | ch... 57 9e-09
Medtr3g107713.1 | GTP-binding nuclear Ran-like protein | HC | ch... 57 1e-08
Medtr4g099470.1 | RAB GTPase-like protein A2D | HC | chr4:412983... 55 3e-08
Medtr6g039490.1 | small GTPase family RAB protein | HC | chr6:14... 55 6e-08
Medtr4g113620.1 | GTP-binding nuclear protein Ran1 | HC | chr4:4... 50 1e-06
>Medtr2g090875.1 | Rho-like GTP-binding protein | HC |
chr2:39006073-39004055 | 20130731
Length = 196
Score = 342 bits (876), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 168/196 (85%), Positives = 170/196 (86%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIVLVGTKL 120
TAGQEDYNRLRPLSYRGADV YENISKKWIPELRHYAPTVPIVLVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLLSRASYENISKKWIPELRHYAPTVPIVLVGTKL 120
Query: 121 DLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVLQX 180
DLREDRQYLIDHPGAT ITTAQGEELK+AIGAAVYLECSSKTQQNVKAVFDAAIKVVLQ
Sbjct: 121 DLREDRQYLIDHPGATAITTAQGEELKRAIGAAVYLECSSKTQQNVKAVFDAAIKVVLQP 180
Query: 181 XXXXXXXXXXXXCVFL 196
C+FL
Sbjct: 181 PKQKKKRKKNRSCIFL 196
>Medtr4g088055.1 | Rho-like GTP-binding protein | HC |
chr4:34676171-34677808 | 20130731
Length = 196
Score = 318 bits (815), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 154/196 (78%), Positives = 161/196 (82%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIVLVGTKL 120
TAGQEDYNRLRPLSYRGADV YENISKKWI ELRHYAP VPIVLVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFLLCFSLISKASYENISKKWISELRHYAPNVPIVLVGTKL 120
Query: 121 DLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVLQX 180
DLR+D+Q+ IDHPGAT ITTA+GEELKK IGA Y+ECSSKTQQNVK VFDAAIK+ L+
Sbjct: 121 DLRDDKQFFIDHPGATQITTAKGEELKKMIGAVSYIECSSKTQQNVKVVFDAAIKIALRP 180
Query: 181 XXXXXXXXXXXXCVFL 196
C FL
Sbjct: 181 PKPKKKPRKTRTCTFL 196
>Medtr4g073250.1 | Rho-like GTP-binding protein | HC |
chr4:27704429-27701177 | 20130731
Length = 197
Score = 314 bits (804), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 148/179 (82%), Positives = 159/179 (88%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MS +RFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVVDGST+NLGLWD
Sbjct: 1 MSGSRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVDGSTINLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIVLVGTKL 120
TAGQEDYNRLRPLSYRGADV YENI+KKWIPELRHYAP VPI+LVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIAKKWIPELRHYAPGVPIILVGTKL 120
Query: 121 DLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVLQ 179
DLR+D Q+ DHPGA PITTAQGEEL+K IGA VY+ECSSKTQ+NVKAVFD+AIKVVLQ
Sbjct: 121 DLRDDSQFFQDHPGAAPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDSAIKVVLQ 179
>Medtr8g075240.1 | Rho-like GTP-binding protein | HC |
chr8:31801964-31806400 | 20130731
Length = 197
Score = 310 bits (794), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 144/178 (80%), Positives = 158/178 (88%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MS +RFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+GSTVNLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIVLVGTKL 120
TAGQEDYNRLRPLSYRGADV YEN+SKKWIPEL+HYAP VPI+LVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKL 120
Query: 121 DLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVL 178
DLR+D+Q+ +DHPGA PITTAQGEEL+K I A Y+ECSSK+QQNVKAVFDAAI+VVL
Sbjct: 121 DLRDDKQFFVDHPGAVPITTAQGEELRKLINAPAYIECSSKSQQNVKAVFDAAIRVVL 178
>Medtr5g022600.3 | Rho-like GTP-binding protein | HC |
chr5:8913558-8916499 | 20130731
Length = 197
Score = 306 bits (784), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 143/178 (80%), Positives = 157/178 (88%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MS +RFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+GS VNLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSIVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIVLVGTKL 120
TAGQEDYNRLRPLSYRGADV YEN+SKKWIPEL+HYAP VPI+LVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKL 120
Query: 121 DLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVL 178
DLR+D+Q+ IDHPGA PITTAQGEEL+K I A Y+ECSSK+Q+NVKAVFDAAI+VVL
Sbjct: 121 DLRDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKSQENVKAVFDAAIRVVL 178
>Medtr5g022600.2 | Rho-like GTP-binding protein | HC |
chr5:8913564-8916486 | 20130731
Length = 197
Score = 306 bits (784), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 143/178 (80%), Positives = 157/178 (88%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MS +RFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+GS VNLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSIVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIVLVGTKL 120
TAGQEDYNRLRPLSYRGADV YEN+SKKWIPEL+HYAP VPI+LVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKL 120
Query: 121 DLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVL 178
DLR+D+Q+ IDHPGA PITTAQGEEL+K I A Y+ECSSK+Q+NVKAVFDAAI+VVL
Sbjct: 121 DLRDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKSQENVKAVFDAAIRVVL 178
>Medtr5g022600.1 | Rho-like GTP-binding protein | HC |
chr5:8913558-8916499 | 20130731
Length = 197
Score = 306 bits (784), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 143/178 (80%), Positives = 157/178 (88%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MS +RFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+GS VNLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSIVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIVLVGTKL 120
TAGQEDYNRLRPLSYRGADV YEN+SKKWIPEL+HYAP VPI+LVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKL 120
Query: 121 DLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVL 178
DLR+D+Q+ IDHPGA PITTAQGEEL+K I A Y+ECSSK+Q+NVKAVFDAAI+VVL
Sbjct: 121 DLRDDKQFCIDHPGAVPITTAQGEELRKLINAPAYIECSSKSQENVKAVFDAAIRVVL 178
>Medtr3g078260.1 | Rho-like GTP-binding protein | HC |
chr3:35252654-35257026 | 20130731
Length = 211
Score = 295 bits (754), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 136/178 (76%), Positives = 151/178 (84%)
Query: 2 STARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDT 61
+ +RFIKCVTVGDGAVGKTCMLI YTSN FPTDY+PTVFDNFSANVVV+G TVNLGLWDT
Sbjct: 4 TASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVVEGITVNLGLWDT 63
Query: 62 AGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIVLVGTKLD 121
AGQEDYNRLRPLSYRGADV YEN+ KKWIPEL+H+AP VP+VLVGTKLD
Sbjct: 64 AGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVFKKWIPELQHFAPGVPVVLVGTKLD 123
Query: 122 LREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVLQ 179
LREDR YL DHPG P+TT QGEEL+K IGA Y+ECSSKTQQNVK VFDAAI++V++
Sbjct: 124 LREDRHYLADHPGMVPVTTEQGEELRKQIGATYYIECSSKTQQNVKGVFDAAIRMVIK 181
>Medtr6g087980.1 | Rho-like GTP-binding protein | HC |
chr6:33118043-33114412 | 20130731
Length = 209
Score = 290 bits (743), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 137/179 (76%), Positives = 149/179 (83%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MS ++FIKCVTVGDGAVGKTCMLI YTSN FPTDY+PTVFDNFSANV VDGS VNLGLWD
Sbjct: 1 MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGSIVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIVLVGTKL 120
TAGQEDY+RLRPLSYRGAD+ YEN+ KKW+PELR +AP VPIVLVGTKL
Sbjct: 61 TAGQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIVLVGTKL 120
Query: 121 DLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVLQ 179
DLREDR Y DH G IT+A+GEEL+K IGAA Y+ECSSKTQQNVKAVFD AIKVVLQ
Sbjct: 121 DLREDRGYFADHTGYNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQ 179
>Medtr3g078260.2 | Rho-like GTP-binding protein | HC |
chr3:35252654-35257026 | 20130731
Length = 148
Score = 201 bits (510), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 93/119 (78%), Positives = 101/119 (84%)
Query: 2 STARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDT 61
+ +RFIKCVTVGDGAVGKTCMLI YTSN FPTDY+PTVFDNFSANVVV+G TVNLGLWDT
Sbjct: 4 TASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVVEGITVNLGLWDT 63
Query: 62 AGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIVLVGTKL 120
AGQEDYNRLRPLSYRGADV YEN+ KKWIPEL+H+AP VP+VLVGTKL
Sbjct: 64 AGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVFKKWIPELQHFAPGVPVVLVGTKL 122
>Medtr7g103070.1 | RAB GTPase-like protein C2B | HC |
chr7:41440857-41436532 | 20130731
Length = 214
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 91/174 (52%), Gaps = 15/174 (8%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQED 66
K + +GD VGK+C+L+++ SN+ D PT+ +F ++ V G + L +WDTAGQE
Sbjct: 18 KILLIGDSGVGKSCLLVTFISNSSVEDLSPTIGVDFKIKMLTVGGKRLKLTIWDTAGQER 77
Query: 67 YNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIV--LVGTKLDLRE 124
+ L YRGA + N+S+ W EL Y+ V LVG K+D
Sbjct: 78 FRTLTSSYYRGAQGIILVYDVTRRETFTNLSEVWSKELELYSTNQECVKMLVGNKVDKDS 137
Query: 125 DRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDA-AIKVV 177
+R ++ +G L K +G + LECS+KT++NV+ F+ A+K++
Sbjct: 138 ER----------AVSREEGLSLAKELG-CLLLECSAKTRENVEKCFEELALKIM 180
>Medtr1g115325.1 | RAB GTPase-like protein A5B | HC |
chr1:52031011-52034310 | 20130731
Length = 215
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 86/167 (51%), Gaps = 13/167 (7%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPEL-RHYAPTVPIVLVGTKLDLR 123
E + + YRGA + NI + WI + +H + V +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDEASFNNI-RNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
E ++ A P T++G+ L G + E S+KT NV+ VF
Sbjct: 134 ESKR-------AVP--TSKGQALADEYGIK-FFETSAKTNMNVEEVF 170
>Medtr1g068740.1 | RAB GTPase-like protein A5B | HC |
chr1:29352144-29345511 | 20130731
Length = 216
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 86/167 (51%), Gaps = 13/167 (7%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPEL-RHYAPTVPIVLVGTKLDLR 123
E + + YRGA + NI K WI + +H + V +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-KNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
E ++ A P T++G+ L G + E S+KT NV+ VF
Sbjct: 134 ESKR-------AVP--TSKGQALADEYGIK-FFETSAKTNMNVEEVF 170
>Medtr1g068730.1 | RAB GTPase-like protein A5B | HC |
chr1:29344444-29337634 | 20130731
Length = 216
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 85/167 (50%), Gaps = 13/167 (7%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPEL-RHYAPTVPIVLVGTKLDLR 123
E + + YRGA + NI K WI + +H + V +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-KNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
E ++ A P T++G+ L G + E S+KT NV VF
Sbjct: 134 ESKR-------AVP--TSKGQALADEYGIK-FFETSAKTNMNVDEVF 170
>Medtr7g100020.2 | RAB GTPase-like protein A5B | HC |
chr7:40194971-40198587 | 20130731
Length = 216
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 86/167 (51%), Gaps = 13/167 (7%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPEL-RHYAPTVPIVLVGTKLDLR 123
E + + YRGA + NI + WI + +H + V +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
E ++ A P T++G+ L G + E S+KT NV+ VF
Sbjct: 134 ESKR-------AVP--TSKGQALADEYGIK-FFETSAKTNLNVEEVF 170
>Medtr7g100020.1 | RAB GTPase-like protein A5B | HC |
chr7:40194971-40198610 | 20130731
Length = 216
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 86/167 (51%), Gaps = 13/167 (7%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPEL-RHYAPTVPIVLVGTKLDLR 123
E + + YRGA + NI + WI + +H + V +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
E ++ A P T++G+ L G + E S+KT NV+ VF
Sbjct: 134 ESKR-------AVP--TSKGQALADEYGIK-FFETSAKTNLNVEEVF 170
>Medtr2g027660.1 | RAB GTPase-like protein C2B | HC |
chr2:10132029-10135733 | 20130731
Length = 211
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 86/172 (50%), Gaps = 14/172 (8%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLW 59
MS A K + +GD VGK+C+L+ +T F + T+ F A ++ +D + L +W
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 60 DTAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYA-PTVPIVLVGT 118
DTAGQE + + YRGA + +++ W+ + R +A + I+L+G
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLA-SWLEDARQHANANMTIMLIGN 119
Query: 119 KLDLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
K DL R ++T +GE+ K G +++E S+KT QNV+ F
Sbjct: 120 KCDLAHRR----------AVSTEEGEQFAKENG-LIFMEASAKTAQNVEEAF 160
>Medtr6g021790.1 | small GTPase family RAB protein | HC |
chr6:7514453-7508570 | 20130731
Length = 211
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 87/181 (48%), Gaps = 14/181 (7%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLW 59
MS K + +GD VGK+C+L+ +T F + T+ F A ++ +D + L +W
Sbjct: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMLTIDSRPIKLQIW 60
Query: 60 DTAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYA-PTVPIVLVGT 118
DTAGQE + + YRGA + +++ W+ + R +A P + I L+G
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLA-SWLEDARQHANPNMTITLIGN 119
Query: 119 KLDLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVL 178
K DL R ++ +GE+ K G +++E S+KT QNV+ F +L
Sbjct: 120 KCDLSHRR----------AVSKEEGEQFAKENG-LLFMEASAKTAQNVEEAFIKTAAKIL 168
Query: 179 Q 179
Q
Sbjct: 169 Q 169
>Medtr8g093740.1 | RAB GTPase-like protein A5B | HC |
chr8:39223227-39227011 | 20130731
Length = 208
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 87/176 (49%), Gaps = 15/176 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSAN-VVVDGSTVNLGLWDTAGQ 64
K + +GD VGK+ +L+ +TS+ F D PT+ +F V ++G + L +WDTAGQ
Sbjct: 13 MFKLLMIGDSGVGKSSLLLRFTSDDFD-DLSPTIGVDFKVKYVTIEGKKLKLAIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPI--VLVGTKLDL 122
E + L YRGA + N+S+ W E+ Y+ +LVG K+D
Sbjct: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEIWAKEIDLYSTNQDCMKMLVGNKVDK 131
Query: 123 REDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVL 178
DR +T +G + + G +++ECS+KT+ NV+ F+ + VL
Sbjct: 132 EGDR----------VVTKKEGIDFAREYG-CLFIECSAKTRVNVQQCFEELVLKVL 176
>Medtr8g093740.2 | RAB GTPase-like protein A5B | HC |
chr8:39223240-39227053 | 20130731
Length = 208
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 87/176 (49%), Gaps = 15/176 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSAN-VVVDGSTVNLGLWDTAGQ 64
K + +GD VGK+ +L+ +TS+ F D PT+ +F V ++G + L +WDTAGQ
Sbjct: 13 MFKLLMIGDSGVGKSSLLLRFTSDDFD-DLSPTIGVDFKVKYVTIEGKKLKLAIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPI--VLVGTKLDL 122
E + L YRGA + N+S+ W E+ Y+ +LVG K+D
Sbjct: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEIWAKEIDLYSTNQDCMKMLVGNKVDK 131
Query: 123 REDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVL 178
DR +T +G + + G +++ECS+KT+ NV+ F+ + VL
Sbjct: 132 EGDR----------VVTKKEGIDFAREYG-CLFIECSAKTRVNVQQCFEELVLKVL 176
>Medtr3g096350.1 | small GTPase family RAB protein | HC |
chr3:44038043-44043862 | 20130731
Length = 207
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSAN-VVVDGSTVNLGLWDTAGQE 65
K + +GD VGK+ +L+ +TS++F + PT+ +F +DG + L +WDTAGQE
Sbjct: 13 FKLLMIGDSGVGKSSLLLCFTSDSFE-NLSPTIGVDFKVKYFTIDGKKLKLAIWDTAGQE 71
Query: 66 DYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIV--LVGTKLDLR 123
+ L YRGA + N+S+ W E+ Y+ + LVG K+D
Sbjct: 72 RFRTLTSSYYRGAQGIIMAYDVTRRDTFTNLSEVWAKEVDLYSTNQDCIKMLVGNKVDKE 131
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVL 178
DR +T +G + + G +++ECS+KT+ NV+ F+ + +L
Sbjct: 132 SDR----------VVTKKEGIDFAREYG-CLFIECSAKTRVNVQHCFEELVLKIL 175
>Medtr1g094220.4 | small GTPase family RAB protein | HC |
chr1:42431707-42425453 | 20130731
Length = 208
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTF-PTDYVPTVFDNFSANVVV--DGSTVNLGLWDTAG 63
+K V +GD VGK+C+++ + F PT V TV +F + + D +TV +WDTAG
Sbjct: 32 VKLVLLGDSGVGKSCIVLRFVRGQFDPTSKV-TVGASFLSQTIALQDSTTVKFEIWDTAG 90
Query: 64 QEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPEL-RHYAPTVPIVLVGTKLDL 122
QE Y L PL YRGA V + ++ W+ EL +H +P + + LVG K DL
Sbjct: 91 QERYAALAPLYYRGAAVAVIAYDITSPESFSK-AQYWVKELQKHGSPDIVMALVGNKADL 149
Query: 123 REDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFD 171
+E R+ + G + + G ++E S+KT N+ +F+
Sbjct: 150 QEKRE----------VAVEDGMDYAEKNG-MFFIETSAKTADNINELFE 187
>Medtr1g094220.1 | small GTPase family RAB protein | HC |
chr1:42431733-42425453 | 20130731
Length = 199
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 88/173 (50%), Gaps = 17/173 (9%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTF-PTDYVPTVFDNFSANVVV--DGSTVNLGLWDTAG 63
+K V +GD VGK+C+++ + F PT V TV +F + + D +TV +WDTAG
Sbjct: 32 VKLVLLGDSGVGKSCIVLRFVRGQFDPTSKV-TVGASFLSQTIALQDSTTVKFEIWDTAG 90
Query: 64 QEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPEL-RHYAPTVPIVLVGTKLDL 122
QE Y L PL YRGA V + ++ W+ EL +H +P + + LVG K DL
Sbjct: 91 QERYAALAPLYYRGAAVAVIAYDITSPESFSK-AQYWVKELQKHGSPDIVMALVGNKADL 149
Query: 123 REDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIK 175
+E R+ ++ G + + G ++E S+KT N+ +F+ K
Sbjct: 150 QEKREVAVED----------GMDYAEKNG-MFFIETSAKTADNINELFEEIAK 191
>Medtr1g094220.5 | small GTPase family RAB protein | HC |
chr1:42431707-42425453 | 20130731
Length = 204
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTF-PTDYVPTVFDNFSANVVV--DGSTVNLGLWDTAG 63
+K V +GD VGK+C+++ + F PT V TV +F + + D +TV +WDTAG
Sbjct: 32 VKLVLLGDSGVGKSCIVLRFVRGQFDPTSKV-TVGASFLSQTIALQDSTTVKFEIWDTAG 90
Query: 64 QEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPEL-RHYAPTVPIVLVGTKLDL 122
QE Y L PL YRGA V + ++ W+ EL +H +P + + LVG K DL
Sbjct: 91 QERYAALAPLYYRGAAVAVIAYDITSPESFSK-AQYWVKELQKHGSPDIVMALVGNKADL 149
Query: 123 REDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFD 171
+E R+ + G + + G ++E S+KT N+ +F+
Sbjct: 150 QEKRE----------VAVEDGMDYAEKNG-MFFIETSAKTADNINELFE 187
>Medtr1g094220.2 | small GTPase family RAB protein | HC |
chr1:42431707-42425453 | 20130731
Length = 204
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTF-PTDYVPTVFDNFSANVVV--DGSTVNLGLWDTAG 63
+K V +GD VGK+C+++ + F PT V TV +F + + D +TV +WDTAG
Sbjct: 32 VKLVLLGDSGVGKSCIVLRFVRGQFDPTSKV-TVGASFLSQTIALQDSTTVKFEIWDTAG 90
Query: 64 QEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPEL-RHYAPTVPIVLVGTKLDL 122
QE Y L PL YRGA V + ++ W+ EL +H +P + + LVG K DL
Sbjct: 91 QERYAALAPLYYRGAAVAVIAYDITSPESFSK-AQYWVKELQKHGSPDIVMALVGNKADL 149
Query: 123 REDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFD 171
+E R+ + G + + G ++E S+KT N+ +F+
Sbjct: 150 QEKRE----------VAVEDGMDYAEKNG-MFFIETSAKTADNINELFE 187
>Medtr1g094220.3 | small GTPase family RAB protein | HC |
chr1:42431707-42425453 | 20130731
Length = 236
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 88/171 (51%), Gaps = 17/171 (9%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTF-PTDYVPTVFDNFSANVVV--DGSTVNLGLWDTAG 63
+K V +GD VGK+C+++ + F PT V TV +F + + D +TV +WDTAG
Sbjct: 32 VKLVLLGDSGVGKSCIVLRFVRGQFDPTSKV-TVGASFLSQTIALQDSTTVKFEIWDTAG 90
Query: 64 QEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPEL-RHYAPTVPIVLVGTKLDL 122
QE Y L PL YRGA V + ++ W+ EL +H +P + + LVG K DL
Sbjct: 91 QERYAALAPLYYRGAAVAVIAYDITSPESFSK-AQYWVKELQKHGSPDIVMALVGNKADL 149
Query: 123 REDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAA 173
+E R+ ++ G + + G ++E S+KT N+ +F+ +
Sbjct: 150 QEKREVAVED----------GMDYAEKNG-MFFIETSAKTADNINELFEVS 189
>Medtr1g062760.1 | RAB GTPase-like protein A5B | HC |
chr1:27495849-27498608 | 20130731
Length = 211
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 89/175 (50%), Gaps = 16/175 (9%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQE 65
K + +GD AVGK+ +L+S+ S + D PT+ +F ++ V G + L +WDTAGQE
Sbjct: 15 FKILLIGDSAVGKSSLLVSFISGSVE-DPAPTIGVDFKIKLLTVGGKRLKLTIWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPI--VLVGTKLDLR 123
+ L YRGA + N+S+ W E+ Y+ +LVG K+D
Sbjct: 74 RFRTLTSSYYRGAQGIILVYDVTRRETFTNLSEVWSKEVELYSTNQDCMKMLVGNKVDRE 133
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDA-AIKVV 177
+R ++T +G L K G + + ECS+KT++NV F+ A+K++
Sbjct: 134 SER----------TVSTEEGLALAKEFGCS-FFECSAKTRENVDKCFEELALKIM 177
>Medtr4g098950.1 | RAB GTPase-like protein B1C | HC |
chr4:40881047-40875458 | 20130731
Length = 206
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 82/165 (49%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQED 66
K V +GD +VGKT ++ + + F Y T+ D S + ++ TV L LWDTAGQE
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 67 YNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELR-HYAPTVPIVLVGTKLDLRED 125
+ L P R + V + N S KWI E+R V +VLVG K DL E
Sbjct: 71 FRSLIPSYIRDSSVAVIVYDVASRQTFLNTS-KWIEEVRSERGSDVIVVLVGNKTDLVEK 129
Query: 126 RQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
RQ ++T +GE + + +++E S+K N+KA+F
Sbjct: 130 RQ----------VSTEEGEAKSRELN-VMFIEASAKAGFNIKALF 163
>Medtr4g063160.2 | RAB GTPase-like protein A5B | HC |
chr4:23386901-23382754 | 20130731
Length = 216
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 87/169 (51%), Gaps = 15/169 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRL--RPLSYRGADVXXXXXXXXXXXXYENISKKWIPEL-RHYAPTVPIVLVGTKLD 121
E ++ + YRGA + NI + WI + +H + V +LVG K D
Sbjct: 75 ERFSFVINNFTYYRGAMGILLVYDVTDEASFNNI-RNWIRNIEQHASDNVNKILVGNKAD 133
Query: 122 LREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
+ E ++ A P T++G+ L G + E S+KT NV+ VF
Sbjct: 134 MDESKR-------AVP--TSKGQALADEYGIK-FFETSAKTNLNVEEVF 172
>Medtr4g063160.1 | RAB GTPase-like protein A5B | HC |
chr4:23387260-23382754 | 20130731
Length = 216
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 87/169 (51%), Gaps = 15/169 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRL--RPLSYRGADVXXXXXXXXXXXXYENISKKWIPEL-RHYAPTVPIVLVGTKLD 121
E ++ + YRGA + NI + WI + +H + V +LVG K D
Sbjct: 75 ERFSFVINNFTYYRGAMGILLVYDVTDEASFNNI-RNWIRNIEQHASDNVNKILVGNKAD 133
Query: 122 LREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
+ E ++ A P T++G+ L G + E S+KT NV+ VF
Sbjct: 134 MDESKR-------AVP--TSKGQALADEYGIK-FFETSAKTNLNVEEVF 172
>Medtr8g006970.2 | RAB GTPase-like protein A5D | HC |
chr8:1148710-1145036 | 20130731
Length = 181
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 17/175 (9%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K + +GD VGK+C+L+ + +++ Y+ T+ +F V DG T+ L +WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAP-TVPIVLVGTKLDLR 123
E + + YRGA + N+ K+W+ E+ YA V +LVG K DL
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDEESFNNV-KQWLSEIDRYASDNVNKLLVGNKSDLT 126
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF---DAAIK 175
+R A TA+ E IG ++E S+K NV+ F AAIK
Sbjct: 127 ANR--------AVSYDTAK--EFADQIGIP-FMETSAKDATNVEGAFMAMAAAIK 170
>Medtr1g029450.1 | small GTPase family RAB protein | HC |
chr1:10110413-10114701 | 20130731
Length = 215
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 15/176 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSAN-VVVDGSTVNLGLWDTAGQ 64
K + +GD VGK+ +L+ +TS+ F D PT+ +F V + G + L +WDTAGQ
Sbjct: 17 LFKLLMIGDSGVGKSTLLLRFTSDNFE-DLSPTIGVDFKVKYVTLGGKKLKLAIWDTAGQ 75
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIV--LVGTKLDL 122
E + L YRGA + N+S W E+ Y+ + LVG K+D
Sbjct: 76 ERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDK 135
Query: 123 REDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVL 178
+R +T + + + G +Y ECS+KT+ NV+ F+ + +L
Sbjct: 136 ESER----------AVTKKEAVDFARQYG-CLYTECSAKTRVNVEQCFEELVMKIL 180
>Medtr8g006970.1 | RAB GTPase-like protein A5D | HC |
chr8:1147960-1144960 | 20130731
Length = 217
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 17/175 (9%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K + +GD VGK+C+L+ + +++ Y+ T+ +F V DG T+ L +WDTAGQ
Sbjct: 22 LFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 81
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAP-TVPIVLVGTKLDLR 123
E + + YRGA + N+ K+W+ E+ YA V +LVG K DL
Sbjct: 82 ERFRTITSSYYRGAHGIIIVYDVTDEESFNNV-KQWLSEIDRYASDNVNKLLVGNKSDLT 140
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF---DAAIK 175
+R A TA+ E IG ++E S+K NV+ F AAIK
Sbjct: 141 ANR--------AVSYDTAK--EFADQIGIP-FMETSAKDATNVEGAFMAMAAAIK 184
>Medtr2g102060.1 | small GTPase family RAB protein | HC |
chr2:43921046-43919465 | 20130731
Length = 200
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 79/165 (47%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQED 66
K V +GD GKT + + + F + PT+ F ++ + +TV +WDTAGQE
Sbjct: 12 KLVLLGDMGTGKTSLALRFVKGQFFQNQEPTIGAAFFTQILSLSEATVKFDIWDTAGQER 71
Query: 67 YNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPEL-RHYAPTVPIVLVGTKLDLRED 125
Y+ L P+ YRGA + +KKW+ EL RH + + + LV K DL
Sbjct: 72 YHSLAPMYYRGAAAAIVVYDISSIDTFVR-AKKWVQELQRHGSQKLVMALVANKCDLEPK 130
Query: 126 RQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
R+ + T GE+ + G Y+E S+KT +N+ +F
Sbjct: 131 RE----------VETEDGEQFAQENG-MFYMETSAKTAENINELF 164
>Medtr8g031870.1 | RAB GTPase-like protein A1D | HC |
chr8:11931504-11930682 | 20130731
Length = 189
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 89/172 (51%), Gaps = 14/172 (8%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLW 59
MS + K + +GD VGK+C+L+ +T N F + T+ F + ++ ++V L +W
Sbjct: 1 MSRSYAFKYIIIGDTGVGKSCLLLQFTDNRFQRFHDVTIGVEFGIRTININNNSVKLQIW 60
Query: 60 DTAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPT-VPIVLVGT 118
DTAGQE + + YR A +++++ W+ + R +A + + I+LVG
Sbjct: 61 DTAGQERFRSITRSYYRKAAGALLVYDITRRETFDHMA-TWLEDARQHASSDMIIMLVGN 119
Query: 119 KLDLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
K DL G ++T +GE+ K G +++E S+K+++N++ F
Sbjct: 120 KSDL----------AGNRLVSTEEGEKFAKENG-LMFMEVSAKSRENIEEAF 160
>Medtr5g013900.1 | RAB GTPase-like protein B1C | HC |
chr5:4581017-4585541 | 20130731
Length = 207
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQED 66
K V +GD +VGKT ++ + + F Y T+ D S + ++ TV L LWDTAGQE
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 67 YNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELR-HYAPTVPIVLVGTKLDLRED 125
+ L P R + V + N + KWI E+R V IVLVG K DL E
Sbjct: 71 FRSLIPSYIRDSSVAVIVYDVASRQTFLNTT-KWIEEVRTERGSDVIIVLVGNKTDLVEK 129
Query: 126 RQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
RQ I+ A+ EL +++E S+K N+KA+F
Sbjct: 130 RQVSIEDG------EAKARELN-----VMFIETSAKAGFNIKALF 163
>Medtr8g090215.1 | RAB GTPase-like protein B1C | HC |
chr8:37854485-37851712 | 20130731
Length = 207
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 81/165 (49%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQED 66
K V +GD +VGKT ++ + + F T Y T+ D S + ++ TV L LWDTAGQE
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 67 YNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRH-YAPTVPIVLVGTKLDLRED 125
+ L P R + V + N + KW+ E+R V IVLVG K DL E
Sbjct: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLN-TNKWVEEVRQERGSDVIIVLVGNKTDLVEK 129
Query: 126 RQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
RQ I+ +G+ K G +++E S+K N+K +F
Sbjct: 130 RQVSIE----------EGDAKSKEFG-IMFIETSAKAGFNIKPLF 163
>Medtr8g103550.1 | RAB GTPase-like protein A5B | HC |
chr8:43575571-43573270 | 20130731
Length = 198
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 81/165 (49%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQED 66
K V +GD GKT +++ + F T+ F V+ ++ +TV +WDTAGQE
Sbjct: 11 KLVLLGDMGTGKTSLVLRFVKGQFSEYQESTIGAAFFTQVLSLNEATVKFDIWDTAGQER 70
Query: 67 YNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYA-PTVPIVLVGTKLDLRED 125
Y+ L P+ YRG+ + +KKW+ E++ A P + ++LV K DL +
Sbjct: 71 YHSLAPMYYRGSAAAIVVYDITSMDSFVR-AKKWVREVQRQANPNLIMLLVANKADLEDQ 129
Query: 126 RQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
R+ + +GEE K G + + E S+KT QNV +F
Sbjct: 130 RK----------VGNEEGEEYAKENGMS-FFETSAKTAQNVNELF 163
>Medtr3g087160.1 | RAB GTPase-like protein B1C | HC |
chr3:39530214-39525780 | 20130731
Length = 206
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 78/165 (47%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQED 66
K V +GD +VGKT ++ + + F T Y T+ D S + ++ TV L LWDTAGQE
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 67 YNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELR-HYAPTVPIVLVGTKLDLRED 125
+ L P R + V + N + KW+ E+R V IVLVG K DL E
Sbjct: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLN-TNKWVEEVRAERGSDVIIVLVGNKTDLVEK 129
Query: 126 RQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
RQ I+ A K +++E S+K N+K +F
Sbjct: 130 RQVSIEEGDA-----------KSRESGIMFIETSAKAGFNIKPLF 163
>Medtr7g081700.1 | RAB GTPase-like protein B1C | HC |
chr7:31228785-31232855 | 20130731
Length = 202
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K + +GD VGK+C+L+ + +++ Y+ T+ +F V DG T+ L +WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAP-TVPIVLVGTKLDLR 123
E + + YRGA + N+ K+W+ E+ YA V +LVG K DL
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDEESFNNV-KQWLSEIDRYASDNVNKLLVGNKCDLT 126
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDA 172
+R D A IG ++E S+K NV+ F A
Sbjct: 127 SERAVSYDTAKA----------FADEIGIP-FMETSAKDSTNVEQAFMA 164
>Medtr8g089985.1 | RAB GTPase-like protein A1D | HC |
chr8:37627491-37624788 | 20130731
Length = 225
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 79/166 (47%), Gaps = 14/166 (8%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSAN-VVVDGSTVNLGLWDTAGQE 65
K V +GD AVGK+ +L ++ N F D T+ F +V+D TV +WDTAGQE
Sbjct: 18 FKVVLIGDSAVGKSQILARFSRNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTAGQE 77
Query: 66 DYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYA-PTVPIVLVGTKLDLRE 124
Y + YRGA +++I +W+ ELR++A + I+LVG K DL
Sbjct: 78 RYRAVTSAYYRGAVGAMLVYDITKRQTFDHIP-RWLEELRNHADKNIVIILVGNKSDLEN 136
Query: 125 DRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
R D P A+ E L +LE S+ NV+A F
Sbjct: 137 QR----DVPTEDAKEFAEKEGL-------FFLETSALQATNVEASF 171
>Medtr1g068730.2 | RAB GTPase-like protein A5B | HC |
chr1:29344444-29337634 | 20130731
Length = 171
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 68/129 (52%), Gaps = 3/129 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPEL-RHYAPTVPIVLVGTKLDLR 123
E + + YRGA + NI K WI + +H + V +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-KNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 124 EDRQYLIDH 132
E ++ + H
Sbjct: 134 ESKRVCLTH 142
>Medtr8g031660.1 | RAB GTPase-like protein A5B | LC |
chr8:11902753-11902127 | 20130731
Length = 208
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 14/172 (8%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLW 59
MS + K + +GD VGK+C+L +T N+F + T+ F + + + + L +W
Sbjct: 1 MSHSYLFKFIIIGDIGVGKSCLLFRFTDNSFKPIHDITIGVEFGIKFINIKNNRIKLHIW 60
Query: 60 DTAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIV-LVGT 118
DTAGQE + + YRGA + +++ W+ E+R + + I+ LVG
Sbjct: 61 DTAGQETFRSITRSYYRGAAGALLVYDITKRETFNHLA-TWLEEVREHGNSNTIITLVGN 119
Query: 119 KLDLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
K DL + R ++T + E+ K G +++E S+K+ +N++ F
Sbjct: 120 KSDLAKKR----------VVSTEEAEKFAKENG-LMFMEVSAKSSENIEEAF 160
>Medtr2g005500.1 | RAB GTPase-like protein B1C | HC |
chr2:184631-186040 | 20130731
Length = 203
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 84/167 (50%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K + +GD +VGK+C+L+ + +++ Y+ T+ +F V ++G T L +WDTAGQ
Sbjct: 9 LFKLLIIGDSSVGKSCLLLRFADDSYDDTYISTIGVDFKIRTVELEGKTAKLQIWDTAGQ 68
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYA-PTVPIVLVGTKLDLR 123
E + + YRGA + N+ K+W+ E+ YA +V +LVG K DL
Sbjct: 69 ERFRTITSSYYRGAHGIIIVYDVTDIESFNNV-KQWLHEIDRYANHSVSKLLVGNKCDLT 127
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
+++ + H T A +EL +LE S+K NV+ F
Sbjct: 128 DNK---LVH---THTAKAFADEL-----GIPFLETSAKDSINVEQAF 163
>Medtr2g083860.1 | RAB GTPase-like protein A1D | HC |
chr2:35195372-35201445 | 20130731
Length = 218
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 79/167 (47%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSA-NVVVDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ ++ VD + +WDTAGQ
Sbjct: 13 LFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLTVDAKVIKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELR-HYAPTVPIVLVGTKLDLR 123
E Y + YRGA +EN + +W+ ELR H P + ++L+G K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRRATFEN-AARWLKELRDHTDPNIVVMLIGNKSDLR 131
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
+L+ P + A+ E L ++E S+ NV+ F
Sbjct: 132 ----HLVAVPTEDGKSFAERESL-------YFMETSALEATNVENAF 167
>Medtr1g068740.2 | RAB GTPase-like protein A5B | HC |
chr1:29352144-29345511 | 20130731
Length = 197
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 3/129 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPEL-RHYAPTVPIVLVGTKLDLR 123
E + + YRGA + NI K WI + +H + V +LVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-KNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 124 EDRQYLIDH 132
E ++ H
Sbjct: 134 ESKRVCPTH 142
>Medtr3g069510.1 | RAB GTPase-like protein A1D | HC |
chr3:31090285-31088261 | 20130731
Length = 216
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 79/167 (47%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ + V+G TV +WDTAGQ
Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTIQVEGKTVKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPT-VPIVLVGTKLDLR 123
E Y + YRGA +EN+ ++W+ ELR +A + + I+L G K DL
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQTFENV-QRWLRELRDHADSNIVIMLAGNKSDL- 129
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
+H A AQ K+ + +LE S+ NV+ F
Sbjct: 130 -------NHLRAVSSDDAQNLAEKETLS---FLETSALEALNVEKAF 166
>Medtr0262s0050.1 | RAB GTPase-like protein A1D | HC |
scaffold0262:13029-14834 | 20130731
Length = 222
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 78/166 (46%), Gaps = 14/166 (8%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQE 65
K V +GD AVGKT +L + N F D T+ F + +++D TV +WDTAGQE
Sbjct: 16 FKVVLIGDSAVGKTQLLGRFARNEFKVDSKATIGVEFQTKTLIIDNKTVKAQIWDTAGQE 75
Query: 66 DYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYA-PTVPIVLVGTKLDLRE 124
Y + YRGA +++++ +W+ ELR +A + I+L+G K DL
Sbjct: 76 RYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMA-RWLEELRSHADKNIVIMLIGNKCDL-- 132
Query: 125 DRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
YL P AQ E L ++E S+ NV+ F
Sbjct: 133 --SYLRAVPMEDAEEFAQRENL-------FFMETSALEATNVETCF 169
>Medtr2g096550.1 | RAB GTPase-like protein A1D | HC |
chr2:41238336-41235628 | 20130731
Length = 213
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 14/168 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQ 64
IK + +GD VGK+ +L+ ++ + F T Y+ T+ D + + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAP--TVPIVLVGTKLDL 122
E + + YRGA + NI+ WI + ++ V +LVG K+D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIT-NWIRSIEQHSSDNIVNKILVGNKVDM 133
Query: 123 REDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
E ++ A P + Q K I + E S+KT NV F
Sbjct: 134 DESKR-------AVPFSKGQALANKYGIK---FFETSAKTNLNVDEAF 171
>Medtr3g086980.1 | RAB GTPase-like protein A1D | HC |
chr3:39434756-39431186 | 20130731
Length = 222
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 79/166 (47%), Gaps = 14/166 (8%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSAN-VVVDGSTVNLGLWDTAGQE 65
K V +GD AVGK+ +L + N F D T+ F +V++ +V +WDTAGQE
Sbjct: 17 FKVVLIGDSAVGKSQILARFARNDFSMDSKATIGVEFQTRTLVIEHKSVKAQIWDTAGQE 76
Query: 66 DYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYA-PTVPIVLVGTKLDLRE 124
Y + YRGA +++I +W+ ELR++A + I+L+G K DL E
Sbjct: 77 RYRAVTSAYYRGAVGAMLVYDITKRPSFDHIP-RWLEELRNHADKNIVIILIGNKSDLEE 135
Query: 125 DRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
R A P A+ K+ + +LE S+ NV+ F
Sbjct: 136 QR--------AVPTEDAKEFAEKEGL---FFLETSALQATNVETAF 170
>Medtr1g052475.1 | RAB GTPase-like protein A1D | HC |
chr1:21336471-21339658 | 20130731
Length = 223
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 79/166 (47%), Gaps = 14/166 (8%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQE 65
K V +GD AVGKT +L ++ N F D T+ F + +V+D TV +WDTAGQE
Sbjct: 16 FKVVLIGDSAVGKTQLLARFSRNQFNVDSKATIGVEFQTKTLVIDNKTVKAQIWDTAGQE 75
Query: 66 DYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPT-VPIVLVGTKLDLRE 124
Y + YRGA +++++ +W+ ELR +A T + I+L+G K DL
Sbjct: 76 RYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMA-RWLEELRGHADTNIVIMLIGNKCDLGT 134
Query: 125 DRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
L P AQ E L ++E S+ NV+ F
Sbjct: 135 ----LKAVPTEDAQEFAQRENL-------FFMETSALESTNVETAF 169
>Medtr2g005510.1 | RAB GTPase-like protein A1D | HC |
chr2:188783-187481 | 20130731
Length = 220
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 80/171 (46%), Gaps = 14/171 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ + V+G TV +WDTAGQ
Sbjct: 15 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYA-PTVPIVLVGTKLDLR 123
E Y + YRGA ++N++ +W+ ELR +A + I+L+G K DL+
Sbjct: 75 ERYRAITSAYYRGALGALLVYDVTKPTTFDNVT-RWLKELRDHADANIVIMLIGNKTDLK 133
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAI 174
H A AQ K+ + ++E S+ NV+ F +
Sbjct: 134 --------HLRAVATEDAQSYAEKEGLS---FIETSALEATNVEKAFQTTL 173
>Medtr2g014990.1 | RAB GTPase-like protein A1D | HC |
chr2:4375511-4372352 | 20130731
Length = 217
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 77/167 (46%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSA-NVVVDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ ++ VD V +WDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELR-HYAPTVPIVLVGTKLDLR 123
E Y + YRGA +EN+ ++W+ ELR H + ++LVG K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDANIVVMLVGNKADLR 131
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
R +T +TA E ++E S+ NV+ F
Sbjct: 132 HLRAV------STEDSTAFAEREN-----TFFMETSALESMNVENAF 167
>Medtr7g051940.1 | RAB GTPase-like protein A1D | HC |
chr7:18234251-18230040 | 20130731
Length = 215
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 81/174 (46%), Gaps = 14/174 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD AVGK+ +L + N F ++ T+ F +V +DG V +WDTAGQ
Sbjct: 13 LFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQMVEIDGKEVKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPEL-RHYAPTVPIVLVGTKLDLR 123
E + + YRGA +E+I K+W+ EL TV +LVG K DL
Sbjct: 73 ERFRAVTSAYYRGAFGALVVYDISRRGTFESI-KRWLDELTTQNDSTVARMLVGNKCDLE 131
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVV 177
R+ I+ A A+ E L ++E S+ NV+ F+ I+ +
Sbjct: 132 NIREVSIEEGKA----LAEEEGL-------FFMETSALDSTNVQTAFEIVIREI 174
>Medtr8g031830.1 | small GTPase family RAB protein | HC |
chr8:11916853-11917491 | 20130731
Length = 198
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 89/171 (52%), Gaps = 14/171 (8%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLW 59
MS + K + +GD VGK+C+L+ +T N F + T+ F + ++ + V L +W
Sbjct: 1 MSRSYAFKYIIIGDIGVGKSCLLLQFTDNRFQRFHDTTIGVEFGIRTININNNPVKLQIW 60
Query: 60 DTAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIV-LVGT 118
DTAGQE ++ + YR A +++++ W+ + R +A + I+ L+G
Sbjct: 61 DTAGQERFSSITKSYYRKAADALLVYDITRRETFDHMA-TWLEDARQHASSDTIIMLIGN 119
Query: 119 KLDLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAV 169
K DL +R ++T +GE+ K G +++E S+K+++N++ V
Sbjct: 120 KSDLACNR----------VVSTEEGEKFTKENG-LMFMEVSAKSRENIEEV 159
>Medtr4g079350.1 | RAB GTPase-like protein C2B | HC |
chr4:30648654-30646057 | 20130731
Length = 217
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 63/132 (47%), Gaps = 3/132 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ + VD V +WDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELR-HYAPTVPIVLVGTKLDLR 123
E Y + YRGA +EN+ ++W+ ELR H + I+LVG K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDANIVIMLVGNKADLR 131
Query: 124 EDRQYLIDHPGA 135
R D A
Sbjct: 132 HLRAVSTDDAKA 143
>Medtr8g031680.1 | RAB GTPase-like protein C2B | LC |
chr8:11907473-11906841 | 20130731
Length = 210
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 87/172 (50%), Gaps = 14/172 (8%)
Query: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLW 59
MS + K + +GD VGK+C+++ + N F + T+ F + ++ + V L +W
Sbjct: 1 MSHSYAFKYIIIGDTGVGKSCLVLQFMDNRFQRFHNATIGVGFGFKTININNNPVKLQIW 60
Query: 60 DTAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPT-VPIVLVGT 118
DTAGQE + + YR A + +++ W+ + R +A + + I+L+G
Sbjct: 61 DTAGQERFRSITKSYYRKAACALLVYDITKRETFNHLA-TWLEDARQHASSDMIIMLIGN 119
Query: 119 KLDLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
K DL +R ++T +GE+ K G +++E S+K+++N++ F
Sbjct: 120 KSDLACNR----------VVSTKEGEKFAKENG-LMFMEVSAKSRENIEEAF 160
>Medtr4g088090.1 | RAB GTPase-like protein A1D | HC |
chr4:34699316-34702141 | 20130731
Length = 217
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ + VD V +WDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELR-HYAPTVPIVLVGTKLDLR 123
E Y + YRGA +EN+ ++W+ ELR H + ++LVG K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDANIVVMLVGNKADLR 131
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
R + AT + + ++E S+ NV++ F
Sbjct: 132 HLRA--VSTEDATSFSEREN---------TYFMETSALESLNVESAF 167
>Medtr8g092020.1 | RAB GTPase-like protein A1D | HC |
chr8:38407885-38409949 | 20130731
Length = 209
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 78/177 (44%), Gaps = 15/177 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
+K + +GD VGKT ++ Y F Y T+ +F + ++VD V L +WDTAGQ
Sbjct: 12 LLKVIVLGDSGVGKTSLMNQYVYKKFSQQYKATIGADFVTKELLVDDKLVTLQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPT-----VPIVLVGTK 119
E ++ L YRGAD ++ ++ W + A T P VL+G K
Sbjct: 72 ERFHSLGAAFYRGADCCVLVYDVNIHKTFDTLN-NWHDDFLKQADTGNPDAFPFVLLGNK 130
Query: 120 LDLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKV 176
+D +D + +T + E + G+ Y E S+K NV F KV
Sbjct: 131 VD--------VDGGNSRRVTEKKAREWCASRGSIPYFETSAKEGYNVDDAFLCVAKV 179
>Medtr1g097420.1 | RAB GTPase-like protein A1D | HC |
chr1:43946590-43951820 | 20130731
Length = 207
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 81/186 (43%), Gaps = 17/186 (9%)
Query: 1 MSTAR--FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLG 57
MS R +K + +GD VGKT ++ Y N F Y T+ +F + + +D V L
Sbjct: 1 MSLRRRTLLKVIVLGDSGVGKTSLMNQYVHNKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 58 LWDTAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPE-LRHYAP----TVP 112
+WDTAGQE + L YRGAD ++++ W E L+ P P
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLAYDVNVMRSFDSLD-TWHEEFLKQANPPDTRAFP 119
Query: 113 IVLVGTKLDLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDA 172
+L+G K+D ID + ++ + + + G Y E S+K NV A F
Sbjct: 120 FILLGNKID--------IDGGNSRVVSEKKANDWCASKGNIPYFETSAKEDYNVDAAFLC 171
Query: 173 AIKVVL 178
K L
Sbjct: 172 IAKTAL 177
>Medtr2g075950.1 | RAB GTPase-like protein A1D | HC |
chr2:31789231-31793100 | 20130731
Length = 217
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ + VD + +WDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELR-HYAPTVPIVLVGTKLDLR 123
E Y + YRGA +EN+ +W+ ELR H + ++LVG K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHATFENVD-RWLKELRNHTDSNIVVMLVGNKADLR 131
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
+L+ + A+ E L ++E S+ NV+ F
Sbjct: 132 ----HLVAVSTEDGKSYAEKESL-------YFMETSALEATNVENAF 167
>Medtr4g064897.1 | RAB GTPase-like protein A1D | HC |
chr4:24249982-24247615 | 20130731
Length = 215
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ + V+G TV +WDTAGQ
Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPT-VPIVLVGTKLDLR 123
E Y + YRGA ++N++ +W+ ELR +A + + I++ G K DL
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQTFDNVN-RWLRELRDHADSNIVIMMAGNKSDLN 130
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
R ++ G+ L + G + +LE S+ N++ F
Sbjct: 131 HLR----------AVSEDDGQALAEKEGLS-FLETSALEATNIEKAF 166
>Medtr8g027220.1 | Ras-related small GTP-binding family protein | HC
| chr8:9528022-9525895 | 20130731
Length = 232
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 78/165 (47%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQED 66
K V +GD AVGKT +L ++ N F D T+ F V ++G + +WDTAGQE
Sbjct: 28 KVVVIGDSAVGKTQILSRFSKNEFCFDSKSTIGVEFQTRTVTINGKVIKAQIWDTAGQER 87
Query: 67 YNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAP-TVPIVLVGTKLDLRED 125
Y + YRGA +++++ KW+ ELR +A ++ I+LVG K DL +
Sbjct: 88 YRAVTSAYYRGALGAMLVYDITKRQSFDHVA-KWVEELRAHADNSIVIMLVGNKGDLVDL 146
Query: 126 RQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
R ++ A QG + E S+ T NV+ F
Sbjct: 147 R--MVPTEDAVEFAEDQG---------LFFSETSALTGVNVEGAF 180
>Medtr3g064390.1 | small GTPase family RAB protein | HC |
chr3:28986937-28992404 | 20130731
Length = 200
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 75/165 (45%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQED 66
K V +GD GK+ +++ + F T+ F S + V+ +TV +WDTAGQE
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 67 YNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYA-PTVPIVLVGTKLDLRED 125
Y+ L P+ YRGA + +KKW+ EL+ P + + L G K DL +
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITSSDSFSR-AKKWVQELQKQGNPNMVMALAGNKSDLEDK 130
Query: 126 RQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
R+ TA+ + ++E S+K+ NV VF
Sbjct: 131 RK-----------VTAEEARVYAEENGLFFMETSAKSAANVNDVF 164
>Medtr7g117910.1 | small GTPase family RAB protein | HC |
chr7:48931651-48932623 | 20130731
Length = 212
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 64/121 (52%), Gaps = 3/121 (2%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQED 66
K V +GD AVGKT ML + N F D T+ F + V ++G + +WDTAGQE
Sbjct: 22 KVVVIGDSAVGKTQMLSRFAKNEFCFDSKSTIGVEFQTRTVTINGKLIKAQIWDTAGQER 81
Query: 67 YNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAP-TVPIVLVGTKLDLRED 125
Y + YRGA +++++ +WI ELR +A ++ I+L+G K DL +
Sbjct: 82 YRAVTSAYYRGALGAMLVYDITKRQTFDHVA-RWIEELRSHADNSIVIMLIGNKGDLVDQ 140
Query: 126 R 126
R
Sbjct: 141 R 141
>Medtr7g405790.1 | RAB GTPase-like protein A1D | HC |
chr7:264041-266047 | 20130731
Length = 220
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 82/174 (47%), Gaps = 14/174 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
K V +GD AVGK+ +L Y N F T+ F + ++ +D V +WDTAGQ
Sbjct: 15 LFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSLEIDSKEVKAQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELR-HYAPTVPIVLVGTKLDLR 123
E + + YRGA ++++ +W+ EL+ H TV ++LVG K DL
Sbjct: 75 ERFRAVTSAYYRGAVGALIVYDISRRTTFDSVG-RWLDELKTHCDTTVAMMLVGNKCDLD 133
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVV 177
R ++ +G+ L ++ G ++E S+ NVK F+ I+ +
Sbjct: 134 NIR----------DVSIEEGKSLAESEG-LFFMETSALDSTNVKTAFEMVIREI 176
>Medtr5g076590.1 | small GTPase family RAB protein | HC |
chr5:32675525-32681053 | 20130731
Length = 200
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQED 66
K V +GD GK+ +++ + F T+ F S + V+ +TV +WDTAGQE
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 67 YNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYA-PTVPIVLVGTKLDLRED 125
Y+ L P+ YRGA + +KKW+ EL+ P + + G K DL +
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITNLESFTR-AKKWVQELQKQGNPNMVVAFAGNKADLEDK 130
Query: 126 RQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
R+ TA+ + ++E S+KT NV +F
Sbjct: 131 RK-----------VTAEEARVYAEENGLFFIETSAKTAANVNDIF 164
>Medtr2g101890.1 | RAB GTPase-like protein A1D | HC |
chr2:43841412-43838102 | 20130731
Length = 209
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 82/180 (45%), Gaps = 15/180 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
+K + +GD VGKT ++ Y + F Y T+ +F + V V+ L +WDTAGQ
Sbjct: 10 LLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQVEDRLFTLQIWDTAGQ 69
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPE-LRHYAPT----VPIVLVGTK 119
E + L YRGAD +EN++ W E L +P+ P V++G K
Sbjct: 70 ERFQSLGVAFYRGADCCVLVYDVNVMKSFENLN-HWREEFLIQASPSDPENFPFVVLGNK 128
Query: 120 LDLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVLQ 179
+D +D + ++ + + + G Y E S+K NV+A F+ K L+
Sbjct: 129 VD--------VDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECITKNALK 180
>Medtr1g090717.1 | RAB GTPase-like protein A5B | HC |
chr1:40716435-40711176 | 20130731
Length = 212
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 16/176 (9%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYV-PTVFDNFSANVVVDG-STVNLGLWDTAGQ 64
K + +GD VGK+ +L+S+ SN D + PT+ +F + G + L +WDTAGQ
Sbjct: 16 FKVLLIGDSGVGKSSLLLSFISNANSLDDLSPTIGVDFKIKLFTIGDKRLKLTIWDTAGQ 75
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPI--VLVGTKLDL 122
E + + YRGA + N+ W E+ Y+ +LVG K+D
Sbjct: 76 ERFGTVICSYYRGAHGIVLVYDVTRRETFTNLVGTWAKEVGLYSTNHDCIKILVGNKVDK 135
Query: 123 REDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF-DAAIKVV 177
+R ++ +G L K ++LECS+KT++NV+ F D +K++
Sbjct: 136 ESER----------AVSKEEGMALAKE-HRCLFLECSAKTKENVQQCFKDLTLKIL 180
>Medtr1g078200.1 | RAB GTPase-like protein C2B | HC |
chr1:34998790-34993821 | 20130731
Length = 224
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 82/174 (47%), Gaps = 14/174 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
K V +GD AVGK+ +L + + F + T+ F + + ++G V +WDTAGQ
Sbjct: 14 LFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEVKAQIWDTAGQ 73
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELR-HYAPTVPIVLVGTKLDLR 123
E + + YRGA +++I +W+ EL H V +LVG K DL+
Sbjct: 74 ERFRAVTSAYYRGAVGALLVYDISRRQTFDSIG-RWLNELHTHSDMNVVTILVGNKSDLK 132
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVV 177
+ R+ + T +G+ L +A G ++E S+ NV A F +K +
Sbjct: 133 DARE----------VPTTEGKALAEAQG-LFFMETSALDSSNVVAAFQTVVKEI 175
>Medtr4g012940.1 | RAB GTPase-like protein A1D | HC |
chr4:3466085-3469888 | 20130731
Length = 207
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 17/187 (9%)
Query: 1 MSTAR--FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLG 57
M++ R +K + +GD VGKT ++ Y + F Y T+ +F + V + L
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 58 LWDTAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPE-LRHYAPT----VP 112
+WDTAGQE + L YRGAD +EN++ W E L +P+ P
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFENLN-HWREEFLIQASPSDPENFP 119
Query: 113 IVLVGTKLDLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDA 172
V++G K+D +D + ++ + + + G Y E S+K NV+A F
Sbjct: 120 FVVLGNKID--------VDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFQC 171
Query: 173 AIKVVLQ 179
K L+
Sbjct: 172 IAKNALK 178
>Medtr8g036220.1 | RAB GTPase-like protein A1D | HC |
chr8:13393739-13391340 | 20130731
Length = 229
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 77/167 (46%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L + N F T+ F + V++D V +WDTAGQ
Sbjct: 16 MFKVVMIGDSGVGKSQLLNRFVRNEFHLKSKATIGVEFLTKTVLMDHKLVKAQIWDTAGQ 75
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYA-PTVPIVLVGTKLDLR 123
E Y + YRGA + +I +KW+ EL ++A + ++LVG K DL
Sbjct: 76 ERYQAITTAYYRGATGALLTYDITKRHTFNHI-EKWLDELHNHADKNIVVMLVGNKSDLS 134
Query: 124 EDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
R+ PI A E+L K G ++E S+ NV+ F
Sbjct: 135 SIRE--------VPIEEA--EDLAKQKG-LFFIETSALDSNNVEPAF 170
>Medtr3g064390.2 | small GTPase family RAB protein | HC |
chr3:28986937-28992404 | 20130731
Length = 158
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 3/122 (2%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQED 66
K V +GD GK+ +++ + F T+ F S + V+ +TV +WDTAGQE
Sbjct: 12 KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 67 YNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYA-PTVPIVLVGTKLDLRED 125
Y+ L P+ YRGA + +KKW+ EL+ P + + L G K DL +
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDITSSDSFSR-AKKWVQELQKQGNPNMVMALAGNKSDLEDK 130
Query: 126 RQ 127
R+
Sbjct: 131 RK 132
>Medtr6g079550.1 | RAB GTPase-like protein A1D | HC |
chr6:30013567-30009535 | 20130731
Length = 216
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFS-ANVVVDGSTVNLGLWDTAGQ 64
K V +GD VGK+ ++ +T + F D PT+ F N+ V + +WDTAGQ
Sbjct: 12 LFKTVLIGDSGVGKSNLISRFTKDEFRLDSKPTIGVEFGYKNIKVRDKLIKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYA-PTVPIVLVGTKLDLR 123
E + + YRGA + NI KKW+ ELR + + I+LV K DL
Sbjct: 72 ERFRAITSSYYRGALGAMLVYDITRIITFVNI-KKWLHELREFGNEDMVIILVANKSDLS 130
Query: 124 EDRQ 127
+ R+
Sbjct: 131 QSRE 134
>Medtr2g090865.1 | RAB GTPase-like protein A1D | HC |
chr2:39001995-38999681 | 20130731
Length = 215
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSA-NVVVDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ +V + V +WDTAGQ
Sbjct: 11 LFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRILDKLVKAQIWDTAGQ 70
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELR-HYAPTVPIVLVGTKLDLR 123
E Y + YRGA +EN+ ++W+ ELR H V I+LVG K DL+
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDSTRHVTFENV-ERWLKELRDHTDAYVVIMLVGNKADLK 129
>Medtr4g069850.1 | RAB GTPase-like protein A1D | HC |
chr4:26276568-26272817 | 20130731
Length = 206
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 15/180 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
+K + +GD VGKT ++ Y + F Y T+ +F + V + L +WDTAGQ
Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYA-----PTVPIVLVGTK 119
E + L YRGAD ++N++ W E A P V++G K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLN-NWREEFLIQANPSDPENFPFVVIGNK 126
Query: 120 LDLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVLQ 179
+D ID + ++ + A G Y E S+K NV+ F K L+
Sbjct: 127 ID--------IDGGNSRVVSEKKARAWCAAKGNIPYFETSAKEGINVEEAFQTIAKDALK 178
>Medtr3g096350.2 | small GTPase family RAB protein | HC |
chr3:44038043-44042591 | 20130731
Length = 156
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSAN-VVVDGSTVNLGLWDTAGQE 65
K + +GD VGK+ +L+ +TS++F + PT+ +F +DG + L +WDTAGQE
Sbjct: 13 FKLLMIGDSGVGKSSLLLCFTSDSFE-NLSPTIGVDFKVKYFTIDGKKLKLAIWDTAGQE 71
Query: 66 DYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIV--LVGTKLD 121
+ L YRGA + N+S+ W E+ Y+ + LVG K+D
Sbjct: 72 RFRTLTSSYYRGAQGIIMAYDVTRRDTFTNLSEVWAKEVDLYSTNQDCIKMLVGNKVD 129
>Medtr3g096350.3 | small GTPase family RAB protein | HC |
chr3:44038043-44042644 | 20130731
Length = 149
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSAN-VVVDGSTVNLGLWDTAGQE 65
K + +GD VGK+ +L+ +TS++F + PT+ +F +DG + L +WDTAGQE
Sbjct: 13 FKLLMIGDSGVGKSSLLLCFTSDSFE-NLSPTIGVDFKVKYFTIDGKKLKLAIWDTAGQE 71
Query: 66 DYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIV--LVGTKLD 121
+ L YRGA + N+S+ W E+ Y+ + LVG K+D
Sbjct: 72 RFRTLTSSYYRGAQGIIMAYDVTRRDTFTNLSEVWAKEVDLYSTNQDCIKMLVGNKVD 129
>Medtr8g107070.1 | RAB GTPase-like protein A2D | HC |
chr8:45233889-45231298 | 20130731
Length = 265
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 3/119 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFS-ANVVVDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L + + F D PT+ F+ N+ V + +WDTAGQ
Sbjct: 14 LFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQIWDTAGQ 73
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHY-APTVPIVLVGTKLDL 122
E + + YRGA YE++ +W+ ELR + + ++LVG K DL
Sbjct: 74 ERFRAITSSYYRGALGALLVYDITRRSSYESVG-RWLVELREFGGEEMVVILVGNKCDL 131
>Medtr7g103070.2 | RAB GTPase-like protein C2B | HC |
chr7:41440287-41436532 | 20130731
Length = 158
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 47 VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRH 106
+ V G + L +WDTAGQE + L YRGA + N+S+ W EL
Sbjct: 2 LTVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSEVWSKELEL 61
Query: 107 YAPTVPIV--LVGTKLDLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQ 164
Y+ V LVG K+D +R ++ +G L K +G + LECS+KT++
Sbjct: 62 YSTNQECVKMLVGNKVDKDSER----------AVSREEGLSLAKELG-CLLLECSAKTRE 110
Query: 165 NVKAVFDA-AIKVV 177
NV+ F+ A+K++
Sbjct: 111 NVEKCFEELALKIM 124
>Medtr1g097420.2 | RAB GTPase-like protein A1D | HC |
chr1:43946590-43951820 | 20130731
Length = 234
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 72/168 (42%), Gaps = 15/168 (8%)
Query: 17 VGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQEDYNRLRPLSY 75
VGKT ++ Y N F Y T+ +F + + +D V L +WDTAGQE + L Y
Sbjct: 46 VGKTSLMNQYVHNKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFY 105
Query: 76 RGADVXXXXXXXXXXXXYENISKKWIPE-LRHYAP----TVPIVLVGTKLDLREDRQYLI 130
RGAD ++++ W E L+ P P +L+G K+D I
Sbjct: 106 RGADCCVLAYDVNVMRSFDSLD-TWHEEFLKQANPPDTRAFPFILLGNKID--------I 156
Query: 131 DHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVL 178
D + ++ + + + G Y E S+K NV A F K L
Sbjct: 157 DGGNSRVVSEKKANDWCASKGNIPYFETSAKEDYNVDAAFLCIAKTAL 204
>Medtr8g093740.5 | RAB GTPase-like protein A5B | HC |
chr8:39223227-39227011 | 20130731
Length = 175
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 24/159 (15%)
Query: 22 MLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVX 81
+L+S T F YV ++G + L +WDTAGQE + L YRGA
Sbjct: 7 LLLSTTGVDFKVKYVT-----------IEGKKLKLAIWDTAGQERFRTLTSSYYRGAQGI 55
Query: 82 XXXXXXXXXXXYENISKKWIPELRHYAPTVPI--VLVGTKLDLREDRQYLIDHPGATPIT 139
+ N+S+ W E+ Y+ +LVG K+D DR +T
Sbjct: 56 IMVYDVTRRETFTNLSEIWAKEIDLYSTNQDCMKMLVGNKVDKEGDR----------VVT 105
Query: 140 TAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVL 178
+G + + G +++ECS+KT+ NV+ F+ + VL
Sbjct: 106 KKEGIDFAREYG-CLFIECSAKTRVNVQQCFEELVLKVL 143
>Medtr8g093740.4 | RAB GTPase-like protein A5B | HC |
chr8:39223431-39227053 | 20130731
Length = 175
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 24/159 (15%)
Query: 22 MLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVX 81
+L+S T F YV ++G + L +WDTAGQE + L YRGA
Sbjct: 7 LLLSTTGVDFKVKYVT-----------IEGKKLKLAIWDTAGQERFRTLTSSYYRGAQGI 55
Query: 82 XXXXXXXXXXXYENISKKWIPELRHYAPTVPI--VLVGTKLDLREDRQYLIDHPGATPIT 139
+ N+S+ W E+ Y+ +LVG K+D DR +T
Sbjct: 56 IMVYDVTRRETFTNLSEIWAKEIDLYSTNQDCMKMLVGNKVDKEGDR----------VVT 105
Query: 140 TAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVL 178
+G + + G +++ECS+KT+ NV+ F+ + VL
Sbjct: 106 KKEGIDFAREYG-CLFIECSAKTRVNVQQCFEELVLKVL 143
>Medtr8g093740.3 | RAB GTPase-like protein A5B | HC |
chr8:39223227-39227053 | 20130731
Length = 175
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 24/159 (15%)
Query: 22 MLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVX 81
+L+S T F YV ++G + L +WDTAGQE + L YRGA
Sbjct: 7 LLLSTTGVDFKVKYVT-----------IEGKKLKLAIWDTAGQERFRTLTSSYYRGAQGI 55
Query: 82 XXXXXXXXXXXYENISKKWIPELRHYAPTVPI--VLVGTKLDLREDRQYLIDHPGATPIT 139
+ N+S+ W E+ Y+ +LVG K+D DR +T
Sbjct: 56 IMVYDVTRRETFTNLSEIWAKEIDLYSTNQDCMKMLVGNKVDKEGDR----------VVT 105
Query: 140 TAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVL 178
+G + + G +++ECS+KT+ NV+ F+ + VL
Sbjct: 106 KKEGIDFAREYG-CLFIECSAKTRVNVQQCFEELVLKVL 143
>Medtr7g094810.7 | Rho GTPase | HC | chr7:37834516-37844546 |
20130731
Length = 467
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 74/186 (39%), Gaps = 34/186 (18%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFP-------------TDYVPTVFDNFSANVVVDGST 53
++ V GD GK+ ++ + S +FP DY P
Sbjct: 9 VRVVVAGDRGTGKSSLIAAIASESFPDTVLPVLPPTLLPADYFP--------------DH 54
Query: 54 VNLGLWDTAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPI 113
V + + DT+ + R +GADV + +S W EL+ TVPI
Sbjct: 55 VPITVIDTSSSLEKQNKRNEELKGADVVVLTYACNDSQSFSRLSSYWFRELQKLEVTVPI 114
Query: 114 VLVGTKLDLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAA 173
++VG KLDLR++ Q + + + L++ A +ECS+ T V VF A
Sbjct: 115 IVVGCKLDLRDESQQV-------SLERLMAQLLQEFKNVATCIECSAATLYQVPEVFYFA 167
Query: 174 IKVVLQ 179
K VL
Sbjct: 168 QKAVLH 173
>Medtr7g094810.2 | Rho GTPase | HC | chr7:37834516-37844542 |
20130731
Length = 643
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 74/186 (39%), Gaps = 34/186 (18%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFP-------------TDYVPTVFDNFSANVVVDGST 53
++ V GD GK+ ++ + S +FP DY P
Sbjct: 9 VRVVVAGDRGTGKSSLIAAIASESFPDTVLPVLPPTLLPADYFP--------------DH 54
Query: 54 VNLGLWDTAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPI 113
V + + DT+ + R +GADV + +S W EL+ TVPI
Sbjct: 55 VPITVIDTSSSLEKQNKRNEELKGADVVVLTYACNDSQSFSRLSSYWFRELQKLEVTVPI 114
Query: 114 VLVGTKLDLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAA 173
++VG KLDLR++ Q + + + L++ A +ECS+ T V VF A
Sbjct: 115 IVVGCKLDLRDESQQV-------SLERLMAQLLQEFKNVATCIECSAATLYQVPEVFYFA 167
Query: 174 IKVVLQ 179
K VL
Sbjct: 168 QKAVLH 173
>Medtr7g094810.4 | Rho GTPase | HC | chr7:37834516-37844542 |
20130731
Length = 643
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 74/186 (39%), Gaps = 34/186 (18%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFP-------------TDYVPTVFDNFSANVVVDGST 53
++ V GD GK+ ++ + S +FP DY P
Sbjct: 9 VRVVVAGDRGTGKSSLIAAIASESFPDTVLPVLPPTLLPADYFP--------------DH 54
Query: 54 VNLGLWDTAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPI 113
V + + DT+ + R +GADV + +S W EL+ TVPI
Sbjct: 55 VPITVIDTSSSLEKQNKRNEELKGADVVVLTYACNDSQSFSRLSSYWFRELQKLEVTVPI 114
Query: 114 VLVGTKLDLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAA 173
++VG KLDLR++ Q + + + L++ A +ECS+ T V VF A
Sbjct: 115 IVVGCKLDLRDESQQV-------SLERLMAQLLQEFKNVATCIECSAATLYQVPEVFYFA 167
Query: 174 IKVVLQ 179
K VL
Sbjct: 168 QKAVLH 173
>Medtr7g094810.6 | Rho GTPase | HC | chr7:37834516-37843869 |
20130731
Length = 563
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 74/186 (39%), Gaps = 34/186 (18%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFP-------------TDYVPTVFDNFSANVVVDGST 53
++ V GD GK+ ++ + S +FP DY P
Sbjct: 9 VRVVVAGDRGTGKSSLIAAIASESFPDTVLPVLPPTLLPADYFP--------------DH 54
Query: 54 VNLGLWDTAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPI 113
V + + DT+ + R +GADV + +S W EL+ TVPI
Sbjct: 55 VPITVIDTSSSLEKQNKRNEELKGADVVVLTYACNDSQSFSRLSSYWFRELQKLEVTVPI 114
Query: 114 VLVGTKLDLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAA 173
++VG KLDLR++ Q + + + L++ A +ECS+ T V VF A
Sbjct: 115 IVVGCKLDLRDESQQV-------SLERLMAQLLQEFKNVATCIECSAATLYQVPEVFYFA 167
Query: 174 IKVVLQ 179
K VL
Sbjct: 168 QKAVLH 173
>Medtr7g094810.1 | Rho GTPase | HC | chr7:37834516-37844546 |
20130731
Length = 639
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 74/186 (39%), Gaps = 34/186 (18%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFP-------------TDYVPTVFDNFSANVVVDGST 53
++ V GD GK+ ++ + S +FP DY P
Sbjct: 9 VRVVVAGDRGTGKSSLIAAIASESFPDTVLPVLPPTLLPADYFP--------------DH 54
Query: 54 VNLGLWDTAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPI 113
V + + DT+ + R +GADV + +S W EL+ TVPI
Sbjct: 55 VPITVIDTSSSLEKQNKRNEELKGADVVVLTYACNDSQSFSRLSSYWFRELQKLEVTVPI 114
Query: 114 VLVGTKLDLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAA 173
++VG KLDLR++ Q + + + L++ A +ECS+ T V VF A
Sbjct: 115 IVVGCKLDLRDESQQV-------SLERLMAQLLQEFKNVATCIECSAATLYQVPEVFYFA 167
Query: 174 IKVVLQ 179
K VL
Sbjct: 168 QKAVLH 173
>Medtr7g094810.3 | Rho GTPase | HC | chr7:37834516-37844546 |
20130731
Length = 639
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 74/186 (39%), Gaps = 34/186 (18%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFP-------------TDYVPTVFDNFSANVVVDGST 53
++ V GD GK+ ++ + S +FP DY P
Sbjct: 9 VRVVVAGDRGTGKSSLIAAIASESFPDTVLPVLPPTLLPADYFP--------------DH 54
Query: 54 VNLGLWDTAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPI 113
V + + DT+ + R +GADV + +S W EL+ TVPI
Sbjct: 55 VPITVIDTSSSLEKQNKRNEELKGADVVVLTYACNDSQSFSRLSSYWFRELQKLEVTVPI 114
Query: 114 VLVGTKLDLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAA 173
++VG KLDLR++ Q + + + L++ A +ECS+ T V VF A
Sbjct: 115 IVVGCKLDLRDESQQV-------SLERLMAQLLQEFKNVATCIECSAATLYQVPEVFYFA 167
Query: 174 IKVVLQ 179
K VL
Sbjct: 168 QKAVLH 173
>Medtr7g094810.5 | Rho GTPase | HC | chr7:37834516-37843812 |
20130731
Length = 567
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 74/186 (39%), Gaps = 34/186 (18%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFP-------------TDYVPTVFDNFSANVVVDGST 53
++ V GD GK+ ++ + S +FP DY P
Sbjct: 9 VRVVVAGDRGTGKSSLIAAIASESFPDTVLPVLPPTLLPADYFP--------------DH 54
Query: 54 VNLGLWDTAGQEDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPI 113
V + + DT+ + R +GADV + +S W EL+ TVPI
Sbjct: 55 VPITVIDTSSSLEKQNKRNEELKGADVVVLTYACNDSQSFSRLSSYWFRELQKLEVTVPI 114
Query: 114 VLVGTKLDLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAA 173
++VG KLDLR++ Q + + + L++ A +ECS+ T V VF A
Sbjct: 115 IVVGCKLDLRDESQQV-------SLERLMAQLLQEFKNVATCIECSAATLYQVPEVFYFA 167
Query: 174 IKVVLQ 179
K VL
Sbjct: 168 QKAVLH 173
>Medtr1g082870.1 | Rho GTPase-like protein | HC |
chr1:36871248-36880064 | 20130731
Length = 646
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 79/174 (45%), Gaps = 10/174 (5%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQ-E 65
++ V GD GK+ ++ + ++ F + P V + V + V + + DT+ +
Sbjct: 17 VRIVVAGDQGTGKSSLISTASTENFRPNVAP-VLPPTTLAVDLYPDRVPITIIDTSSRVA 75
Query: 66 DYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIVLVGTKLDLRED 125
D NR+ R AD EN+S W+P LR+ VP+++VG KLDLR++
Sbjct: 76 DSNRVAEELQR-ADTVVLTYACDRPETLENLSTVWLPHLRNLEVNVPVIVVGCKLDLRDE 134
Query: 126 RQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVLQ 179
Q + +PI Q E++ I ECS+ V VF A K VL
Sbjct: 135 NQQVSLEQVMSPIMQ-QFREIETCI------ECSASRLIQVPEVFYYAQKAVLH 181
>Medtr1g072280.1 | Rho GTPase | HC | chr1:32084987-32076339 |
20130731
Length = 640
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 12/175 (6%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVF-DNFSANVVVDGSTVNLGLWDTAGQE 65
++ V VGD + GKT ++ + S++FP P + + +N D +V L L DT
Sbjct: 13 VRIVIVGDKSAGKTTLISAMASDSFPATVPPLLRPTHLPSNSFTD--SVPLILIDTPSSV 70
Query: 66 DYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIVLVGTKLDLR-E 124
+ AD +E +S W+P+L+ P+++VG KLDLR E
Sbjct: 71 GEQGKVVEELKRADSVIVTYACDNTMSFERVSTHWLPQLQKLEVKAPVLVVGCKLDLRDE 130
Query: 125 DRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVLQ 179
RQ ++ +TT + ++ + +ECS+ T V VF A K L
Sbjct: 131 SRQVSLES-----LTTGIMNQFREVVTC---IECSAATLYQVPEVFYFAQKAALH 177
>Medtr3g107707.1 | GTP-binding nuclear Ran-like protein | HC |
chr3:49686750-49683969 | 20130731
Length = 221
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 69/165 (41%), Gaps = 15/165 (9%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQE 65
K V VGDG GKT + + + F Y PT+ + + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIVLVGTKLDLRED 125
+ LR Y Y+N+ W +L +PIVL G K+D++ +
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVP-TWHRDLCRVCENIPIVLCGNKVDVK-N 131
Query: 126 RQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
RQ A +T + + L+ Y E S+K+ N + F
Sbjct: 132 RQV-----KAKQVTFHRKKNLQ-------YYEISAKSNYNFEKPF 164
>Medtr3g107717.1 | GTP-binding nuclear Ran-like protein | HC |
chr3:49697497-49694259 | 20130731
Length = 221
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 69/165 (41%), Gaps = 15/165 (9%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQE 65
K V VGDG GKT + + + F Y PT+ + + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIVLVGTKLDLRED 125
+ LR Y Y+N+ W +L +PIVL G K+D++ +
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVP-TWHRDLCRVCENIPIVLCGNKVDVK-N 131
Query: 126 RQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
RQ A +T + + L+ Y E S+K+ N + F
Sbjct: 132 RQV-----KAKQVTFHRKKNLQ-------YYEISAKSNYNFEKPF 164
>Medtr3g107713.1 | GTP-binding nuclear Ran-like protein | HC |
chr3:49692352-49689734 | 20130731
Length = 221
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 69/165 (41%), Gaps = 15/165 (9%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQE 65
K V VGDG GKT + + + F Y PT+ + + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIVLVGTKLDLRED 125
+ LR Y Y+N+ W +L +PIVL G K+D++ +
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVP-TWHRDLCRVCENIPIVLCGNKVDVK-N 131
Query: 126 RQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVF 170
RQ A +T + + L+ Y E S+K+ N + F
Sbjct: 132 RQV-----KAKQVTFHRKKNLQ-------YYEISAKSNYNFEKPF 164
>Medtr4g099470.1 | RAB GTPase-like protein A2D | HC |
chr4:41298313-41300214 | 20130731
Length = 178
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 14/146 (9%)
Query: 29 NTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVXXXXXXX 87
+++ Y+ T+ +F V DG T+ L +WDTAGQE + + YRGA
Sbjct: 7 DSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDV 66
Query: 88 XXXXXYENISKKWIPELRHYAP-TVPIVLVGTKLDLREDRQYLIDHPGATPITTAQGEEL 146
+ N+ K+W+ E+ YA V +LVG K DL + + +++ +
Sbjct: 67 TDQESFNNV-KQWLNEIDRYASENVNKLLVGNKSDLSDKK----------VVSSETAKAF 115
Query: 147 KKAIGAAVYLECSSKTQQNVKAVFDA 172
IG ++E S+K NV+ F A
Sbjct: 116 ADEIGIP-FMETSAKNASNVEQAFMA 140
>Medtr6g039490.1 | small GTPase family RAB protein | HC |
chr6:14294873-14291901 | 20130731
Length = 226
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 71/179 (39%), Gaps = 15/179 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
+K + +GD VGKT ++ Y F T+ +F + ++ +D V L +WDT G+
Sbjct: 8 LLKVIVLGDSGVGKTSLMNQYALKKFSLKCKGTIGADFVTKDLQIDNKLVTLQIWDTEGK 67
Query: 65 EDYNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPT-----VPIVLVGTK 119
E + + YRGAD ++ I W + T P +L+G K
Sbjct: 68 ETFQNVCADFYRGADCCVLVYDVNCFESFD-ILDSWHDDFLKKGNTSNHGISPFILLGNK 126
Query: 120 LDLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVL 178
+D+ + ++ A ++G Y E S+K NV F K L
Sbjct: 127 VDIDGGKSRVVPEKKAKKWCASKGN--------IPYFETSAKEDFNVDDAFLCIAKTAL 177
>Medtr4g113620.1 | GTP-binding nuclear protein Ran1 | HC |
chr4:46721599-46724489 | 20130731
Length = 212
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 10/121 (8%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQED 66
K V VGDG GKT + + + F + +++F N + WDTAGQ
Sbjct: 14 FKLVLVGDGGTGKTTFVKRHLTGEFERE----KYEHFYTNC----GKIRFNCWDTAGQGK 65
Query: 67 YNRLRPLSYRGADVXXXXXXXXXXXXYENISKKWIPELRHYAPTVPIVLVGTKLDLREDR 126
+ LR Y Y+N+ W ++ +PIVL G K+D++ +R
Sbjct: 66 FGGLRDAYYTQGQCAIIMFDVTARLTYKNVP-TWHGDITRVCENIPIVLCGNKVDVK-NR 123
Query: 127 Q 127
Q
Sbjct: 124 Q 124