Miyakogusa Predicted Gene

Lj3g3v2838440.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2838440.1 Non Characterized Hit- tr|F6H5F6|F6H5F6_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,36.97,0.000000000000003,seg,NULL,CUFF.44761.1
         (195 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g090770.1 | proteophosphoglycan-like protein, putative | H...    92   3e-19

>Medtr2g090770.1 | proteophosphoglycan-like protein, putative | HC |
           chr2:38921384-38924362 | 20130731
          Length = 188

 Score = 92.4 bits (228), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/181 (41%), Positives = 85/181 (46%), Gaps = 15/181 (8%)

Query: 1   MAKNNKYASINFNHIYEKSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKPHGR 60
           MAKNNKYASINFNHIY+                                     NK HGR
Sbjct: 1   MAKNNKYASINFNHIYDN--KPITTTKTNNASKNPSLSSSSSFSSASYSAVSAPNK-HGR 57

Query: 61  ILVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHPRPEPGSDAISLRPLGRTGSGP 120
           ILVL                                D PR +PG D+ISLRPLGRTGS  
Sbjct: 58  ILVLTRPTPKPISHPTPPAQSQQSKPNPIQAPVSS-DRPRSQPGPDSISLRPLGRTGSLS 116

Query: 121 SLAVP----NQEKDRELPSPRQPLKPNKFVPPHLRPGYVPKEDPGRFGENGRPKSGGLER 176
           S  +P    N EK++ L     P+K  KFVPPHLRPG+VP+E+  R  EN RPKSGG ER
Sbjct: 117 SGLLPNPVLNGEKEKSL-----PVKSGKFVPPHLRPGFVPREECLR--ENLRPKSGGNER 169

Query: 177 M 177
           M
Sbjct: 170 M 170