Miyakogusa Predicted Gene

Lj3g3v2812200.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2812200.1 Non Characterized Hit- tr|F6H5G7|F6H5G7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,34.27,2e-17,seg,NULL,CUFF.44748.1
         (277 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g090660.1 | hypothetical protein | HC | chr2:38818689-3881...   210   1e-54

>Medtr2g090660.1 | hypothetical protein | HC |
           chr2:38818689-38817390 | 20130731
          Length = 243

 Score =  210 bits (535), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 144/267 (53%), Positives = 163/267 (61%), Gaps = 34/267 (12%)

Query: 17  MASFGNHXXXXXXXXXXXXPQIQAREGKFFSFFTHFRT-NNVKDAQLLLAKXXXXXXXXX 75
           MAS  N             PQIQAR+ KFFSFFTHF+T +NV+D QL  +          
Sbjct: 1   MASLANQVSFLFLLVLFLSPQIQARQNKFFSFFTHFKTTHNVEDPQLPQSPAPAPEPGAA 60

Query: 76  XXXXXXXXXXXXXXXIGST-IPSGPAPEPEFL-DMGEGYGLYGTDSSSSAQYSPTKET-- 131
                          I ST IPSGPAPEP+FL + G GYGLYG DSS   QYSPTKET  
Sbjct: 61  PE-------------IESTNIPSGPAPEPQFLVETGNGYGLYGIDSS---QYSPTKETPK 104

Query: 132 STTTNFENELLNEDFKD-QSYKTGYPQTNFRSNYNNEVYTKNYNTEGYRSXXXXXXXXXX 190
           +T T+FE+ELLNEDF D +SYK GYPQTNF +N  NEVYT        ++          
Sbjct: 105 TTLTDFEDELLNEDFNDNKSYKKGYPQTNFHNN--NEVYT--------KNYNNEENKNSY 154

Query: 191 XXXXXXXXXXXXXERKREGMSDTRFMENGKYHYNVDTENESY-NLNGYDESGRGRTENEG 249
                        ERK EGMSDTRFMENGKY+YNV++ENE Y N+NGY ESGRG TENEG
Sbjct: 155 NSYNGKEFYNNNYERKGEGMSDTRFMENGKYYYNVNSENEKYNNVNGY-ESGRGSTENEG 213

Query: 250 YDEKMQNPNEFDTMEEYEKQQEAQGYT 276
             EK Q  NEF+TMEEYEKQQEAQGYT
Sbjct: 214 NYEKNQYQNEFETMEEYEKQQEAQGYT 240