Miyakogusa Predicted Gene
- Lj3g3v2809830.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2809830.2 Non Characterized Hit- tr|K4CFS6|K4CFS6_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,79.63,8e-19,ZF_SBP,Transcription factor, SBP-box; no
description,Transcription factor, SBP-box;
SBP,Transcriptio,CUFF.44712.2
(147 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g463140.1 | squamosa promoter-binding-like protein | HC | ... 90 6e-19
Medtr4g088555.1 | squamosa promoter-binding-like protein | HC | ... 83 7e-17
Medtr8g005960.1 | squamosa promoter-binding-like protein | HC | ... 82 3e-16
Medtr7g110320.2 | squamosa promoter-binding-like protein | HC | ... 81 3e-16
Medtr7g110320.1 | squamosa promoter-binding-like protein | HC | ... 81 3e-16
Medtr2g078770.1 | squamosa promoter-binding-like protein | LC | ... 80 7e-16
Medtr2g046550.1 | squamosa promoter-binding-like protein | HC | ... 80 9e-16
Medtr2g014200.1 | squamosa promoter-binding-like protein | HC | ... 78 4e-15
Medtr7g028740.1 | squamosa promoter-binding-like protein | HC | ... 77 4e-15
Medtr7g028740.2 | squamosa promoter-binding-like protein | HC | ... 77 4e-15
Medtr1g086250.1 | squamosa promoter-binding-like protein | HC | ... 76 1e-14
Medtr1g035010.1 | squamosa promoter-binding-like protein | HC | ... 75 2e-14
Medtr4g109770.1 | LIGULELESS 1 protein, putative | HC | chr4:456... 74 4e-14
Medtr2g461920.1 | LIGULELESS 1 protein, putative | HC | chr2:256... 73 1e-13
Medtr7g444860.1 | squamosa promoter-binding-like protein | HC | ... 72 2e-13
Medtr3g085180.1 | squamosa promoter-binding-like protein | HC | ... 71 4e-13
Medtr3g099080.1 | squamosa promoter-binding 13A-like protein | H... 70 5e-13
Medtr8g096780.1 | squamosa promoter-binding 13A-like protein | H... 70 6e-13
Medtr5g046670.1 | squamosa promoter-binding-like protein | HC | ... 70 9e-13
Medtr7g092930.1 | squamosa promoter-binding-like protein | HC | ... 70 1e-12
Medtr1g053715.1 | squamosa promoter-binding-like protein | LC | ... 69 2e-12
Medtr8g080690.1 | squamosa promoter-binding-like protein | LC | ... 65 2e-11
Medtr8g080680.1 | squamosa promoter-binding-like protein | HC | ... 63 1e-10
Medtr8g080670.1 | squamosa promoter-binding-like protein | LC | ... 62 2e-10
Medtr8g066240.1 | squamosa promoter-binding 13A-like protein | H... 47 4e-06
>Medtr8g463140.1 | squamosa promoter-binding-like protein | HC |
chr8:22198280-22196925 | 20130731
Length = 180
Score = 90.1 bits (222), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 44/49 (89%)
Query: 95 CCQAEKCNADLHDAKQYHRRHKVCEYHAKAQVVLVGGTRQRFCQQCSRF 143
CCQAE+C ADL DAK+YHRRHKVCE+H+KA VV+V G RQRFCQQCSRF
Sbjct: 64 CCQAERCGADLTDAKRYHRRHKVCEFHSKAPVVVVAGMRQRFCQQCSRF 112
>Medtr4g088555.1 | squamosa promoter-binding-like protein | HC |
chr4:35179012-35174504 | 20130731
Length = 144
Score = 83.2 bits (204), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 41/49 (83%)
Query: 95 CCQAEKCNADLHDAKQYHRRHKVCEYHAKAQVVLVGGTRQRFCQQCSRF 143
CCQ E C+ADL +AKQYHRRHKVCEYHAKA V + G +QRFCQQCSRF
Sbjct: 62 CCQVENCDADLSEAKQYHRRHKVCEYHAKAPAVHIAGLQQRFCQQCSRF 110
>Medtr8g005960.1 | squamosa promoter-binding-like protein | HC |
chr8:421415-419202 | 20130731
Length = 327
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 38/48 (79%)
Query: 96 CQAEKCNADLHDAKQYHRRHKVCEYHAKAQVVLVGGTRQRFCQQCSRF 143
CQAE CNADL AK YHRRHKVCE+H+KA V+ G QRFCQQCSRF
Sbjct: 187 CQAEGCNADLSQAKHYHRRHKVCEFHSKAATVVAAGLTQRFCQQCSRF 234
>Medtr7g110320.2 | squamosa promoter-binding-like protein | HC |
chr7:45220920-45211089 | 20130731
Length = 860
Score = 81.3 bits (199), Expect = 3e-16, Method: Composition-based stats.
Identities = 34/48 (70%), Positives = 37/48 (77%)
Query: 96 CQAEKCNADLHDAKQYHRRHKVCEYHAKAQVVLVGGTRQRFCQQCSRF 143
CQ E C ADL++AK YHRRHKVCE H+KA LVG QRFCQQCSRF
Sbjct: 145 CQVEDCRADLNNAKDYHRRHKVCEIHSKASKALVGNAMQRFCQQCSRF 192
>Medtr7g110320.1 | squamosa promoter-binding-like protein | HC |
chr7:45220920-45210190 | 20130731
Length = 1001
Score = 81.3 bits (199), Expect = 3e-16, Method: Composition-based stats.
Identities = 34/48 (70%), Positives = 37/48 (77%)
Query: 96 CQAEKCNADLHDAKQYHRRHKVCEYHAKAQVVLVGGTRQRFCQQCSRF 143
CQ E C ADL++AK YHRRHKVCE H+KA LVG QRFCQQCSRF
Sbjct: 145 CQVEDCRADLNNAKDYHRRHKVCEIHSKASKALVGNAMQRFCQQCSRF 192
>Medtr2g078770.1 | squamosa promoter-binding-like protein | LC |
chr2:32974296-32971840 | 20130731
Length = 171
Score = 80.1 bits (196), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 41/52 (78%)
Query: 96 CQAEKCNADLHDAKQYHRRHKVCEYHAKAQVVLVGGTRQRFCQQCSRFGEVP 147
CQ E C ADL +K+YHRRHKVCE H+KA VV+V G RQRFCQQCSRF E+
Sbjct: 58 CQVESCGADLTFSKRYHRRHKVCEVHSKASVVVVAGMRQRFCQQCSRFHELA 109
>Medtr2g046550.1 | squamosa promoter-binding-like protein | HC |
chr2:20453789-20462574 | 20130731
Length = 1025
Score = 79.7 bits (195), Expect = 9e-16, Method: Composition-based stats.
Identities = 33/48 (68%), Positives = 36/48 (75%)
Query: 96 CQAEKCNADLHDAKQYHRRHKVCEYHAKAQVVLVGGTRQRFCQQCSRF 143
CQ E C ADL +AK YHRRHKVC+ H+KA LVG QRFCQQCSRF
Sbjct: 139 CQVEDCRADLSNAKDYHRRHKVCDVHSKASKALVGSVMQRFCQQCSRF 186
>Medtr2g014200.1 | squamosa promoter-binding-like protein | HC |
chr2:3964615-3967481 | 20130731
Length = 143
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 42/56 (75%)
Query: 92 ITRCCQAEKCNADLHDAKQYHRRHKVCEYHAKAQVVLVGGTRQRFCQQCSRFGEVP 147
+T CQ + CNADL AKQYH+RHKVCE H+KA VL+ +QRFCQQCSRF EV
Sbjct: 60 VTPSCQVDNCNADLSAAKQYHKRHKVCENHSKAHSVLISELQQRFCQQCSRFHEVS 115
>Medtr7g028740.1 | squamosa promoter-binding-like protein | HC |
chr7:9871981-9875095 | 20130731
Length = 367
Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 39/48 (81%)
Query: 96 CQAEKCNADLHDAKQYHRRHKVCEYHAKAQVVLVGGTRQRFCQQCSRF 143
C + CN+DL D ++YH+RH+VCE H+K VVLVGG +QRFCQQCSRF
Sbjct: 77 CSVDGCNSDLSDCREYHKRHRVCEKHSKTPVVLVGGKQQRFCQQCSRF 124
>Medtr7g028740.2 | squamosa promoter-binding-like protein | HC |
chr7:9871682-9875095 | 20130731
Length = 367
Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 39/48 (81%)
Query: 96 CQAEKCNADLHDAKQYHRRHKVCEYHAKAQVVLVGGTRQRFCQQCSRF 143
C + CN+DL D ++YH+RH+VCE H+K VVLVGG +QRFCQQCSRF
Sbjct: 77 CSVDGCNSDLSDCREYHKRHRVCEKHSKTPVVLVGGKQQRFCQQCSRF 124
>Medtr1g086250.1 | squamosa promoter-binding-like protein | HC |
chr1:38604282-38611936 | 20130731
Length = 1003
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 34/48 (70%)
Query: 96 CQAEKCNADLHDAKQYHRRHKVCEYHAKAQVVLVGGTRQRFCQQCSRF 143
CQ E C ADL K YHRRHKVCE H+KA LVG QRFCQQCSRF
Sbjct: 147 CQVEDCGADLSRGKDYHRRHKVCEMHSKASRALVGNAMQRFCQQCSRF 194
>Medtr1g035010.1 | squamosa promoter-binding-like protein | HC |
chr1:12692334-12698670 | 20130731
Length = 1003
Score = 75.1 bits (183), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/48 (64%), Positives = 34/48 (70%)
Query: 96 CQAEKCNADLHDAKQYHRRHKVCEYHAKAQVVLVGGTRQRFCQQCSRF 143
CQ + C DL AK YHRRHKVCE H+KA L+G QRFCQQCSRF
Sbjct: 104 CQVDNCKEDLSKAKDYHRRHKVCEAHSKASKALLGNQMQRFCQQCSRF 151
>Medtr4g109770.1 | LIGULELESS 1 protein, putative | HC |
chr4:45650584-45646472 | 20130731
Length = 470
Score = 74.3 bits (181), Expect = 4e-14, Method: Composition-based stats.
Identities = 31/52 (59%), Positives = 36/52 (69%)
Query: 92 ITRCCQAEKCNADLHDAKQYHRRHKVCEYHAKAQVVLVGGTRQRFCQQCSRF 143
+T CQ CN DL K YH+RHKVCE H+K +V+V G QRFCQQCSRF
Sbjct: 119 MTAYCQVYGCNKDLSSCKDYHKRHKVCEVHSKTPIVIVNGIEQRFCQQCSRF 170
>Medtr2g461920.1 | LIGULELESS 1 protein, putative | HC |
chr2:25606881-25611792 | 20130731
Length = 539
Score = 72.8 bits (177), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/48 (62%), Positives = 33/48 (68%)
Query: 96 CQAEKCNADLHDAKQYHRRHKVCEYHAKAQVVLVGGTRQRFCQQCSRF 143
CQ CN DL K YH+RHKVCE H+K V+V G QRFCQQCSRF
Sbjct: 171 CQVYGCNKDLSSCKDYHKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRF 218
>Medtr7g444860.1 | squamosa promoter-binding-like protein | HC |
chr7:15016587-15012335 | 20130731
Length = 314
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 92 ITRCCQAEKCNADLHDAKQYHRRHKVCEYHAKAQVVLVGGTRQRFCQQCSRF 143
+TRC Q + CN L +AK+YHRRHKVCE H+KA V+V G QRFCQQCSRF
Sbjct: 146 VTRC-QVDGCNVALMNAKEYHRRHKVCEMHSKAPKVVVLGLEQRFCQQCSRF 196
>Medtr3g085180.1 | squamosa promoter-binding-like protein | HC |
chr3:38492623-38497369 | 20130731
Length = 434
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%)
Query: 92 ITRCCQAEKCNADLHDAKQYHRRHKVCEYHAKAQVVLVGGTRQRFCQQCSRF 143
+ CQ E C DL AK YHR+H++C+ H+K+ VV+V G +RFCQQCSRF
Sbjct: 161 LNPSCQVEGCGLDLSFAKDYHRKHRICDSHSKSPVVVVAGLERRFCQQCSRF 212
>Medtr3g099080.1 | squamosa promoter-binding 13A-like protein | HC |
chr3:45410078-45413482 | 20130731
Length = 376
Score = 70.5 bits (171), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 37/52 (71%)
Query: 92 ITRCCQAEKCNADLHDAKQYHRRHKVCEYHAKAQVVLVGGTRQRFCQQCSRF 143
+T C + CN+DL + + YHRRHKVCE H+K V + G +QRFCQQCSRF
Sbjct: 94 LTVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPEVTICGLKQRFCQQCSRF 145
>Medtr8g096780.1 | squamosa promoter-binding 13A-like protein | HC |
chr8:40622636-40626632 | 20130731
Length = 390
Score = 70.5 bits (171), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 35/48 (72%)
Query: 96 CQAEKCNADLHDAKQYHRRHKVCEYHAKAQVVLVGGTRQRFCQQCSRF 143
C + C ADL + + YHRRHKVCE H+K V +GG +QRFCQQCSRF
Sbjct: 99 CLVDGCQADLSNCRDYHRRHKVCELHSKTAQVTIGGHKQRFCQQCSRF 146
>Medtr5g046670.1 | squamosa promoter-binding-like protein | HC |
chr5:20465349-20459089 | 20130731
Length = 500
Score = 69.7 bits (169), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 34/48 (70%)
Query: 96 CQAEKCNADLHDAKQYHRRHKVCEYHAKAQVVLVGGTRQRFCQQCSRF 143
CQ CN DL +K YH+RHKVC+ H+K V+V G QRFCQQCSRF
Sbjct: 244 CQVYGCNMDLSSSKDYHKRHKVCDVHSKTAKVIVNGVEQRFCQQCSRF 291
>Medtr7g092930.1 | squamosa promoter-binding-like protein | HC |
chr7:36897295-36893347 | 20130731
Length = 337
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 34/48 (70%)
Query: 96 CQAEKCNADLHDAKQYHRRHKVCEYHAKAQVVLVGGTRQRFCQQCSRF 143
CQ E C DL DAK Y+ RHKVC H+K+ V V G +QRFCQQCSRF
Sbjct: 68 CQVEGCKLDLTDAKAYYSRHKVCSMHSKSPTVTVSGLQQRFCQQCSRF 115
>Medtr1g053715.1 | squamosa promoter-binding-like protein | LC |
chr1:22682537-22678198 | 20130731
Length = 350
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 36/52 (69%)
Query: 96 CQAEKCNADLHDAKQYHRRHKVCEYHAKAQVVLVGGTRQRFCQQCSRFGEVP 147
CQ E C DL AK Y+ RHKVC H+K+ V+V G QRFCQQCSRF ++P
Sbjct: 74 CQVEGCKVDLSGAKAYYSRHKVCCMHSKSPSVVVSGLEQRFCQQCSRFHQLP 125
>Medtr8g080690.1 | squamosa promoter-binding-like protein | LC |
chr8:34731697-34729479 | 20130731
Length = 376
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 34/48 (70%)
Query: 96 CQAEKCNADLHDAKQYHRRHKVCEYHAKAQVVLVGGTRQRFCQQCSRF 143
CQ E C DL AK YHR+ +VCE H+K+ +V++ G +RFCQQC RF
Sbjct: 151 CQVEGCGLDLSSAKDYHRKRRVCESHSKSPMVVIDGMVRRFCQQCGRF 198
>Medtr8g080680.1 | squamosa promoter-binding-like protein | HC |
chr8:34727462-34725302 | 20130731
Length = 398
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 36/51 (70%)
Query: 96 CQAEKCNADLHDAKQYHRRHKVCEYHAKAQVVLVGGTRQRFCQQCSRFGEV 146
CQ E C +L AK YH + +VCE HAK+ +V++ G +RFCQQCSRF ++
Sbjct: 132 CQVEGCGLNLSSAKDYHCKRRVCESHAKSPMVVIDGLERRFCQQCSRFHDL 182
>Medtr8g080670.1 | squamosa promoter-binding-like protein | LC |
chr8:34722421-34719933 | 20130731
Length = 412
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 96 CQAEKCNADLHDAKQYHRRHKVCEYHAKAQVVLVGGTRQRFCQQCSRFGEV 146
CQ E C DL AK Y+R+ +VC H+K+ +V++ G +RFCQQCSRF ++
Sbjct: 162 CQVEGCGLDLSSAKHYYRKRRVCVDHSKSPMVVIDGLERRFCQQCSRFHDL 212
>Medtr8g066240.1 | squamosa promoter-binding 13A-like protein | HC |
chr8:27511819-27512136 | 20130731
Length = 105
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 98 AEKCNADLHDAKQYHRRHKVCEYHAKAQVVLVGGTRQRF 136
A+ C ADL + + YH RHKVC+ H+K V +GG +QRF
Sbjct: 64 ADGCQADLSNYRGYHMRHKVCKLHSKTSQVTLGGHKQRF 102