Miyakogusa Predicted Gene

Lj3g3v2807970.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2807970.1 CUFF.44645.1
         (349 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g098515.1 | clathrin light chain-like protein | HC | chr8:...   326   2e-89
Medtr2g013220.1 | clathrin light chain-like protein | HC | chr2:...   214   9e-56
Medtr4g088980.1 | clathrin light chain-like protein | HC | chr4:...   207   1e-53

>Medtr8g098515.1 | clathrin light chain-like protein | HC |
           chr8:41094060-41095751 | 20130731
          Length = 354

 Score =  326 bits (835), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 191/374 (51%), Positives = 219/374 (58%), Gaps = 45/374 (12%)

Query: 1   MESYDSFEDQPPSHHESPPIGA--------PYDDDSGSYTNGFDSXXXXXXXXXXEYYDY 52
           MES DSFE++  SHH+SP  G         P++DD+ S   GF+S          + +DY
Sbjct: 1   MESLDSFEEEQ-SHHQSPTTGGGGGVVVGGPFEDDNNSNYEGFNSQ---------QQFDY 50

Query: 53  G--------PEDDSLNLD---HTNPNPLSPPVYGFGISTPNP--DVITPFQSAQPXXXXX 99
           G        P+DD L +D   + N +  SPP YGFG+S+PNP  D +TPFQ+ +      
Sbjct: 51  GSTFHPPNNPDDDHLTVDTSNNINNDQHSPPGYGFGVSSPNPNPDFVTPFQTNE------ 104

Query: 100 XXXXXXXXXXXXXXPILPDPTLMQEEGSARREWRRKNAIHLXXXXXXXXXMRNQIIKEAE 159
                         P+LPDPT MQEEG ARREWRRKNAIHL         MRNQIIKEAE
Sbjct: 105 ----TDDGIFSSEGPVLPDPTQMQEEGFARREWRRKNAIHLEEKEKREKEMRNQIIKEAE 160

Query: 160 DFKEAFYAKRKLNCETTKTNNREREKIYLANQEKFHKEADKHYWKAIAEIIPREVPNIEK 219
           DFKEAFY KRKLNCET K  NRE+EKIYLANQEKFHKEADKHYWKAIAEIIPREVPNIEK
Sbjct: 161 DFKEAFYEKRKLNCETNKQTNREKEKIYLANQEKFHKEADKHYWKAIAEIIPREVPNIEK 220

Query: 220 RRGKKEAENKPSVHVIQGPKPGKPTDLSRMRQMILKLKQNXXXXXXXXXXXXXXXXXXXX 279
           RRGKKEA+NKPSVHVIQGPKPGKPTDLSRMRQMILKLKQN                    
Sbjct: 221 RRGKKEADNKPSVHVIQGPKPGKPTDLSRMRQMILKLKQNPPTHMMPPPPPKEGKDAKEN 280

Query: 280 XXXXXXXXXXXXXXXXXXXXXSSTPTATSGAVGXX----XXXXXXXXXXXNGESKDPAPV 335
                                + T TA+ G+                   NGE +DP  V
Sbjct: 281 KDGKDAKDAKDGKNDKAEKSSTPTATASPGSAENKPTTPTKDDAAAAASVNGEQQDPPAV 340

Query: 336 EGEQGTTSKPEAAK 349
           EGEQ  +S+P AA+
Sbjct: 341 EGEQVASSEPPAAQ 354


>Medtr2g013220.1 | clathrin light chain-like protein | HC |
           chr2:3526744-3522489 | 20130731
          Length = 313

 Score =  214 bits (546), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 117/214 (54%), Positives = 139/214 (64%), Gaps = 6/214 (2%)

Query: 49  YYDYGPEDDSLNLDHTNPNPLSPPVYGFGISTPNPDVI-TPFQSA--QPXXXXXXXXXXX 105
           Y  Y   D  + +DH      SP +YGF  S PNP    +PF+S   +            
Sbjct: 34  YGGYSNFDGDVTVDHAAAETTSPEIYGF--SDPNPGYSPSPFESVTVENGNDNGNGYGDD 91

Query: 106 XXXXXXXXPILPDPTLMQ-EEGSARREWRRKNAIHLXXXXXXXXXMRNQIIKEAEDFKEA 164
                   PILP P  M+ EEG A REWRR+NAI L         MR +II+EAE++K A
Sbjct: 92  DGVFVSDGPILPPPGEMESEEGYALREWRRQNAIELEEKEKREKEMRLKIIEEAEEYKVA 151

Query: 165 FYAKRKLNCETTKTNNREREKIYLANQEKFHKEADKHYWKAIAEIIPREVPNIEKRRGKK 224
           FY KRKLN ET K  NREREK+++ANQEKFHKEADK YWK IAE+IPREV NIEKRRGKK
Sbjct: 152 FYEKRKLNVETNKVQNREREKLFVANQEKFHKEADKAYWKTIAELIPREVANIEKRRGKK 211

Query: 225 EAENKPSVHVIQGPKPGKPTDLSRMRQMILKLKQ 258
           + + KPS+ V+QGPKPGKPTDLSRMRQ++LKLK 
Sbjct: 212 DQDKKPSITVVQGPKPGKPTDLSRMRQILLKLKH 245


>Medtr4g088980.1 | clathrin light chain-like protein | HC |
           chr4:35592996-35589688 | 20130731
          Length = 306

 Score =  207 bits (527), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 122/237 (51%), Positives = 143/237 (60%), Gaps = 18/237 (7%)

Query: 22  APYDDDSGSYTNGFDSXXXXXXXXXXEYYDYGPEDDSLNLDHTNPNPLSPPVYGFGISTP 81
           A  DDDS S   GF S              Y  ED  + +DHT   P SP V+GF    P
Sbjct: 11  AAGDDDSYSGYGGFSS--------------YSAED--VPVDHTTAAPESPDVFGFSDQDP 54

Query: 82  NPDVITPFQSAQPXXXXXXXXXXXXXXXXXXXPILPDPTLMQEE-GSARREWRRKNAIHL 140
           +    +PF+                       P+LP P  M+ E G+  REWRR+NAI L
Sbjct: 55  SY-AQSPFEPVHAMENGNGYGGHDDDVFVSDGPVLPPPAEMEPEEGNVLREWRRQNAIQL 113

Query: 141 XXXXXXXXXMRNQIIKEAEDFKEAFYAKRKLNCETTKTNNREREKIYLANQEKFHKEADK 200
                    MR +II+EAED+K  FY KRKLN ET K  NREREK+YLANQE FHKEADK
Sbjct: 114 DEKEKREKEMRLKIIEEAEDYKVGFYEKRKLNVETNKVQNREREKLYLANQENFHKEADK 173

Query: 201 HYWKAIAEIIPREVPNIEKRRGKKEAENKPSVHVIQGPKPGKPTDLSRMRQMILKLK 257
           +YWKAI EIIPREV NIEK+RGKK+ +  PSV V+QGPKPGKPTDLSRMRQ++LKLK
Sbjct: 174 NYWKAIGEIIPREVANIEKKRGKKDQDKNPSVTVLQGPKPGKPTDLSRMRQILLKLK 230