Miyakogusa Predicted Gene

Lj3g3v2782630.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2782630.1 Non Characterized Hit- tr|C6T1N5|C6T1N5_SOYBN
Putative uncharacterized protein OS=Glycine max PE=4
S,70,0.00000000001, ,CUFF.44631.1
         (51 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g037580.2 | transmembrane protein, putative | HC | chr4:14...    64   4e-11
Medtr4g037580.1 | transmembrane protein, putative | HC | chr4:14...    64   4e-11

>Medtr4g037580.2 | transmembrane protein, putative | HC |
          chr4:14989098-14986110 | 20130731
          Length = 52

 Score = 63.5 bits (153), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 29/49 (59%), Positives = 37/49 (75%)

Query: 2  AKIEELDEPVTKMTTKRNHGSTRFFVFVDYLFLTIFLGFLSYIIFKFLS 50
          AK++E+DE V +   KRNHGSTR FVF+ YLFL IF+ FL +IIFK + 
Sbjct: 3  AKLKEMDESVAESKKKRNHGSTRLFVFIAYLFLLIFVDFLCFIIFKIVG 51


>Medtr4g037580.1 | transmembrane protein, putative | HC |
          chr4:14989098-14986230 | 20130731
          Length = 52

 Score = 63.5 bits (153), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 29/49 (59%), Positives = 37/49 (75%)

Query: 2  AKIEELDEPVTKMTTKRNHGSTRFFVFVDYLFLTIFLGFLSYIIFKFLS 50
          AK++E+DE V +   KRNHGSTR FVF+ YLFL IF+ FL +IIFK + 
Sbjct: 3  AKLKEMDESVAESKKKRNHGSTRLFVFIAYLFLLIFVDFLCFIIFKIVG 51