Miyakogusa Predicted Gene

Lj3g3v2780580.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2780580.1 CUFF.44622.1
         (274 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g090150.1 | hypothetical protein | HC | chr2:38234986-3823...   167   1e-41
Medtr2g012750.1 | BEST plant protein match is: (TAIR:plant.1) pr...    64   1e-10
Medtr4g046123.1 | hypothetical protein | HC | chr4:16215126-1621...    54   1e-07

>Medtr2g090150.1 | hypothetical protein | HC |
           chr2:38234986-38236210 | 20130731
          Length = 279

 Score =  167 bits (422), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 129/294 (43%), Positives = 153/294 (52%), Gaps = 35/294 (11%)

Query: 1   MGCCLCTPKQHQNVLKYQQTQLRSHAPKSPNATHQSECRVPPPPA--------EESVKEV 52
           MGCC+ TPK  QN LK QQ           N T +++C+VPPP +        EESVKEV
Sbjct: 1   MGCCISTPKDDQNTLKNQQ-----------NFTQEAKCKVPPPQSKSPPHIVEEESVKEV 49

Query: 53  LLET--PISKPQ-VPILTPESKTQLPVVLHSKDPIDEKAAFLEEASDDCSPISGTCSX-- 107
           L ET  PISKPQ VP LT E+ TQ+  +  +KDPI  K    EE S++ S IS TCS   
Sbjct: 50  LFETETPISKPQQVPNLTQETMTQMQNMEITKDPI-MKKPLEEEPSEEISVISETCSVGE 108

Query: 108 -----XXXXXXXXXXXXXXXXXXXXXXXXKRGTRGETRYRNRPHNDAPRRRSHAVIGNGI 162
                                        + GT+   R RNR H+DA R RS+    N +
Sbjct: 109 SYSYSYSTTTTTATVPETREDEVTSKRRIREGTQNRNRNRNRSHSDASRNRSYNADRNRV 168

Query: 163 GGRERR-PNSPARVTEPPPAKKVLMGSGSVRRRE-SGQVRRDPGEDSGRRPGSPSFTRTV 220
           GGRERR P SPARV E PP KK++ GS SV RRE S ++RRD G    RR  SPS  RT 
Sbjct: 169 GGRERRRPKSPARVPEIPPEKKIVAGSRSVCRREFSDKLRRDSGTGVCRRSRSPSCHRTA 228

Query: 221 GAGTSRRQLRPPGGAGRRLLPMXXXXXXXXXXXXXLMEESLENPHVSLECFIFL 274
           G+   R +LR     GRR  P               +EES  NPHVSLECFIFL
Sbjct: 229 GSSNGRSELRQTEKDGRRFPPTEVVGDTNDGVS---VEESFTNPHVSLECFIFL 279


>Medtr2g012750.1 | BEST plant protein match is: (TAIR:plant.1)
           protein, putative | HC | chr2:3273735-3275375 | 20130731
          Length = 265

 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 122/298 (40%), Gaps = 57/298 (19%)

Query: 1   MGCCLCTPKQHQNVLKYQQTQLRSHAPKSPNATHQSECRVPP--PPAEESVKEVLLETPI 58
           MGCC  + +   +   +Q ++       S +    SE R PP  P  EE+VKEVL ETP 
Sbjct: 1   MGCCASSNRSSSHN-DFQPSR------SSISQVKGSENRAPPCVPVEEETVKEVLSETP- 52

Query: 59  SKPQVPILTPESKTQLPVVLHSKDPID--EKAAFLEEASDDCSPISGTCSXXXXXXXXXX 116
            K + P      + + P      D  +  EK  +     D+ S +S  CS          
Sbjct: 53  -KWKKPNERFRYEVEKPKCFEKFDRENKVEKPFY---KVDEISEVSEVCSLSESVSTITF 108

Query: 117 XXXXXXXXXXXXXXXKRGTRGETRYRNRPHNDAPRRRSHAVIGNGIGGRERRPN----SP 172
                              R E     +  N +P +    +  NG    ERR +    SP
Sbjct: 109 TDK----------------REEEEESCKRVNGSPAK----MRKNGSFSGERRESPARKSP 148

Query: 173 ARVTEPPPAKKVLMGSGSVRRRE---SGQV-----RRDPGEDSGRRPGSPSFTRT----- 219
           AR  E  PAK+ +  S  V+RR+   +G +     RRD GE SGRR  SP+ TRT     
Sbjct: 149 ARRLEQSPAKRNIGSSRIVQRRDQMGNGGIKNQPHRRDAGEVSGRRSRSPA-TRTDNGST 207

Query: 220 ---VGAGTSRRQLRPPGGAGRRLLPMXXXXXXXXXXXXXLMEESLENPHVSLECFIFL 274
              VG   S R+     G GR  +P                +ESLENP VSLECFIFL
Sbjct: 208 RSVVGRSLSARKTNQSPGKGRTAVPENGGRKMESKWPSTANDESLENPLVSLECFIFL 265


>Medtr4g046123.1 | hypothetical protein | HC |
          chr4:16215126-16216349 | 20130731
          Length = 348

 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/83 (49%), Positives = 46/83 (55%), Gaps = 17/83 (20%)

Query: 1  MGCCL---CTPKQHQ---NVLKYQQTQLRSHAPKSPNATHQSECRVPPPPAEESVKEVLL 54
          MGCC     T  Q+Q   N LK  Q  LRS   KS N  H  E        EESVKEVL 
Sbjct: 1  MGCCFSRATTKTQNQQNLNSLKNHQPHLRSSQTKS-NPIHYEE--------EESVKEVLS 51

Query: 55 ETPISKPQVPILTPESKTQLPVV 77
          ETPISK   PIL PE+ TQ+P++
Sbjct: 52 ETPISK--APILKPETNTQIPLL 72



 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 73/233 (31%), Positives = 91/233 (39%), Gaps = 25/233 (10%)

Query: 62  QVPILTPESKTQLPVVLHSKDPIDEKAAFLEEASDDCSPIS-GTCSXXXXXXXXXXXXXX 120
           QV IL PES TQ+ +V +        A   E      S +S  T                
Sbjct: 121 QVQILIPESNTQMAIVQNPSQKFQTNAPKEEVTEVVVSQLSEATTITESFSTATTATTAT 180

Query: 121 XXXXXXXXXXXKRGTRGETRYRNRPHNDAPRRRSHAVIGNGIGGRERRPNSPARVTEPPP 180
                      K+  R  T   ++ +    R+R   + G   GG ERR  SPAR  EP P
Sbjct: 181 VTDKREDEATSKQCNRDFTTTTHKWNQSPSRKR--PLTG---GGSERRVKSPARRPEPSP 235

Query: 181 AKKVLMGSGSVRRRE------------SGQVRRDPGEDSGRRPGSPSFTRT-----VGAG 223
            KK+   S  VR RE            SG VRR+ GE SGRR  SPS +RT         
Sbjct: 236 EKKMKSSSRLVRGRESSPVANRKLNVGSGGVRRESGEGSGRRSRSPSCSRTVSGSGKVGV 295

Query: 224 TSRRQLRPPGGAGRRLLPMXXXXXXXXXXXXXLME--ESLENPHVSLECFIFL 274
              R+  P    G                   ++   ES+ENPHVS+ECFIFL
Sbjct: 296 GGGRKQAPAVENGVEKEKEKKSESEEVGDKNDIVSQGESIENPHVSMECFIFL 348