Miyakogusa Predicted Gene

Lj3g3v2780570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2780570.1 Non Characterized Hit- tr|I3T6K4|I3T6K4_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,88.27,0,Elongator protein 3, MiaB family, Radical SA,Elongator
protein 3/MiaB/NifB; no description,Aldolase-,CUFF.44628.1
         (380 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g090140.1 | lipoyl synthase | HC | chr2:38226099-38230633 ...   619   e-177
Medtr1g050432.1 | lipoyl synthase | HC | chr1:19390953-19395413 ...   365   e-101

>Medtr2g090140.1 | lipoyl synthase | HC | chr2:38226099-38230633 |
           20130731
          Length = 378

 Score =  619 bits (1596), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 303/375 (80%), Positives = 312/375 (83%), Gaps = 1/375 (0%)

Query: 1   MYSRVRTVAGTLKWATKPFXXXXXXXXXXXXXXXX-XXXXXXXXXXXEESPSLSDFIALK 59
           MYSR RTVA  LK  TKPF                             ESPSLSDFI+LK
Sbjct: 2   MYSRFRTVAKNLKSTTKPFSFTTATTTTTVSSSEFPQNLTELRARLARESPSLSDFISLK 61

Query: 60  SGDGYSVEVGTXXXXXXXXXWMKESIPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW 119
           S + YSVEVGT         WMKESIPGG KYVQIKKKLRELKLHTVCEEAKCPN+GECW
Sbjct: 62  SNNAYSVEVGTKKNPLPKPKWMKESIPGGWKYVQIKKKLRELKLHTVCEEAKCPNMGECW 121

Query: 120 SGGETGTATATIMILGDTCTRGCRFCNVKTSRTXXXXXXXXXTNVAEAIVAWGLDYVVIT 179
           SGGETGTATATIMILGDTCTRGCRFCNVKTSRT         TNVAEAI +WGLDYVVIT
Sbjct: 122 SGGETGTATATIMILGDTCTRGCRFCNVKTSRTPPPPDPDEPTNVAEAIASWGLDYVVIT 181

Query: 180 SVDRDDLPDQGSGHFTETVQKMKALKPSMLIEALVPDFRGDANCVEKVSKSGLDVFAHNI 239
           SVDRDDLPDQGS HFTETVQK+K LKPS+LIEALVPDFRG+A CVEKVSKSGLDVFAHNI
Sbjct: 182 SVDRDDLPDQGSSHFTETVQKLKILKPSILIEALVPDFRGNAECVEKVSKSGLDVFAHNI 241

Query: 240 ETVEELQSVVRDHRANFKQSLDVLMMAKDYAPAGTLTKTSIMLGCGETPDQVLKTMEKVR 299
           ETVEELQS VRDHRANF QSLDVL MAKDYAPAGTLTKTSIMLGCGETPDQ++KTMEKVR
Sbjct: 242 ETVEELQSAVRDHRANFNQSLDVLRMAKDYAPAGTLTKTSIMLGCGETPDQIVKTMEKVR 301

Query: 300 AAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYQTLGMEMGFRYVASGPMVRSSYKAGE 359
           AAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYQTLGMEMGFRYVASGPMVRSSYKAGE
Sbjct: 302 AAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYQTLGMEMGFRYVASGPMVRSSYKAGE 361

Query: 360 FYIKSMIDSDRAASS 374
           FYIKSMIDSDRA SS
Sbjct: 362 FYIKSMIDSDRAVSS 376


>Medtr1g050432.1 | lipoyl synthase | HC | chr1:19390953-19395413 |
           20130731
          Length = 389

 Score =  365 bits (937), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 168/299 (56%), Positives = 225/299 (75%), Gaps = 2/299 (0%)

Query: 80  WMKESIPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCT 139
           W+++  P GE++ QIK+ + +LKL+TVCEEA+CPN+GECW+GG+ G ATATIM+LGDTCT
Sbjct: 92  WLRQKAPQGERFSQIKESISQLKLNTVCEEAQCPNIGECWNGGDDGIATATIMVLGDTCT 151

Query: 140 RGCRFCNVKTSRTXXXXXXXXXTNVAEAIVAWGLDYVVITSVDRDDLPDQGSGHFTETVQ 199
           RGCRFC VKTS            N A+AI +WG+DY+VITSVDRDD+PD GSGHF +TV+
Sbjct: 152 RGCRFCAVKTSINPAPPDPMEPENTAKAIASWGVDYIVITSVDRDDIPDGGSGHFAQTVK 211

Query: 200 KMKALKPSMLIEALVPDFRGDANCVEKVSKSGLDVFAHNIETVEELQSVVRDHRANFKQS 259
            MK +KP +++E L  DFRGD   VE +  SGLDVFAHNIETV+ LQ +VRD RA ++QS
Sbjct: 212 AMKNIKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQS 271

Query: 260 LDVLMMAKDYAPAGTLTKTSIMLGCGETPDQVLKTMEKVRAAGVDVMTFGQYMRPSKRHM 319
           L VL  AK  +  G +TK+SIMLG GE+ D+V +TM  +RA  VD++T GQY++P+  H+
Sbjct: 272 LAVLNHAKQ-SKEGMITKSSIMLGLGESDDEVKETMMDLRAINVDILTLGQYLQPTPLHL 330

Query: 320 PVSEYITPEAFEKYQTLGMEMGFRYVASGPMVRSSYKAGEFYIKSMI-DSDRAASSSKL 377
            V EY+TPE F+ ++  G  +GFRYVASGP+VRSSY+AGE ++++M+ +S + A  S L
Sbjct: 331 TVKEYVTPEKFDFWKEYGESIGFRYVASGPLVRSSYRAGELFVQTMVRESAKNADGSLL 389