Miyakogusa Predicted Gene

Lj3g3v2769440.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2769440.1 tr|B4FP84|B4FP84_MAIZE Tic20-like protein OS=Zea
mays PE=2 SV=1,32.26,9e-19,Tic20,Tic20-like protein;
seg,NULL,CUFF.44609.1
         (273 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g090045.1 | TIC protein 20-IV, related protein | HC | chr2...   379   e-105
Medtr5g024800.1 | TIC protein 20-IV, related protein | HC | chr5...   330   1e-90
Medtr2g090035.1 | TIC protein 20-IV, related protein | HC | chr2...   224   5e-59
Medtr4g011960.1 | Tic20 family import component | HC | chr4:3156...   125   4e-29

>Medtr2g090045.1 | TIC protein 20-IV, related protein | HC |
           chr2:38116286-38118640 | 20130731
          Length = 272

 Score =  379 bits (973), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 186/248 (75%), Positives = 213/248 (85%), Gaps = 3/248 (1%)

Query: 28  NKDLIPLRRFTTFQGK--NPAIVACASNSPRRSATRLASVSSPLLTDNQAHLSLRVLMSR 85
           NKDLI  RR  +F GK  N AI A A +S  +SATRL +VSSPL TDN  HLSL   +SR
Sbjct: 26  NKDLIQQRR-VSFNGKRKNLAIAALAGSSLGKSATRLTAVSSPLFTDNHGHLSLGAPISR 84

Query: 86  RRNSDIRGQAYIYHWSGFRIPANSEKPEWWWRTLSCIPYLIALQMSATGFYLEPLLDKSR 145
           R +S  R +AYIYHWSGFRIPANSEKPEWWWRTLSCIPYLIA+QMSA G+YLEPLLDK +
Sbjct: 85  RSSSSTRPEAYIYHWSGFRIPANSEKPEWWWRTLSCIPYLIAMQMSAAGYYLEPLLDKYK 144

Query: 146 IFRSLLFYIPGVYNRLPQWFPMLYCYLAIVIVVKNKDFPILFRFHVMMGMLLEIAMQIVW 205
           +F +++FYIPG  NRLP WFP+LYCYLAI++VVKN+DFPI+FRFHVMMGMLLEIA+QIVW
Sbjct: 145 LFENVIFYIPGAVNRLPTWFPILYCYLAIMVVVKNRDFPIIFRFHVMMGMLLEIALQIVW 204

Query: 206 VTSNFMPLIHFKGTLGMYYWAGVAVAYIVMMMHCIRCALLGTFVKIPLLSESAFLHSLFS 265
           V SNFMPLIHFKGTLGMYYWAGVA+AYIV++MH IRCALLGTF  IP++SESAFLHSL +
Sbjct: 205 VASNFMPLIHFKGTLGMYYWAGVALAYIVIIMHSIRCALLGTFSNIPVISESAFLHSLLN 264

Query: 266 LGGFQRPF 273
           +GGFQRPF
Sbjct: 265 IGGFQRPF 272


>Medtr5g024800.1 | TIC protein 20-IV, related protein | HC |
           chr5:9996268-9994312 | 20130731
          Length = 235

 Score =  330 bits (846), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 164/247 (66%), Positives = 187/247 (75%), Gaps = 32/247 (12%)

Query: 28  NKDLIPLRRFTTF-QGKNPAIVACASNSPRRSATRLASVSSPLLTDNQAHLSLRVLMSRR 86
           NKDLI  RR T + + KN AI A A +S                                
Sbjct: 20  NKDLIRRRRITFYRKEKNLAITALAGSS-------------------------------L 48

Query: 87  RNSDIRGQAYIYHWSGFRIPANSEKPEWWWRTLSCIPYLIALQMSATGFYLEPLLDKSRI 146
            NS  R QAYIYHWSGFRIPAN+EKPEWWWRTLSCIPYLIALQMSA G+YLEPLLDK ++
Sbjct: 49  GNSTTRTQAYIYHWSGFRIPANAEKPEWWWRTLSCIPYLIALQMSAAGYYLEPLLDKFKL 108

Query: 147 FRSLLFYIPGVYNRLPQWFPMLYCYLAIVIVVKNKDFPILFRFHVMMGMLLEIAMQIVWV 206
           F +++FYIPG  NRLP WFP+LYCYLAI++VVKNKDFP++FRFHVMMGMLLEIA+QIVWV
Sbjct: 109 FENVIFYIPGACNRLPTWFPILYCYLAIMVVVKNKDFPVIFRFHVMMGMLLEIALQIVWV 168

Query: 207 TSNFMPLIHFKGTLGMYYWAGVAVAYIVMMMHCIRCALLGTFVKIPLLSESAFLHSLFSL 266
            SNFM L+HFKGTLGMYYWAGVA+AYIVM+MH IRCALLGTF  IP++SESAFLHSL ++
Sbjct: 169 VSNFMLLLHFKGTLGMYYWAGVALAYIVMIMHSIRCALLGTFSNIPVISESAFLHSLLNI 228

Query: 267 GGFQRPF 273
           GG Q PF
Sbjct: 229 GGIQWPF 235


>Medtr2g090035.1 | TIC protein 20-IV, related protein | HC |
           chr2:38109568-38112460 | 20130731
          Length = 209

 Score =  224 bits (572), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 121/232 (52%), Positives = 145/232 (62%), Gaps = 46/232 (19%)

Query: 42  GKNPAIVACASNSPRRSATRLASVSSPLLTDNQAHLSLRVLMSRRRNSDIRGQAYIYHWS 101
           G+    V+    S    +  +A+ SSP  T+N A                          
Sbjct: 24  GEMEGTVSGVKISETSHSCFIAAFSSPFFTENHA-------------------------- 57

Query: 102 GFRIPANSEKPEWWWRTLSCIPYLIALQMSATGFYLEPLLDKSRIFRSLLFYIPGVYNRL 161
                   EKPEW       +PYLIAL MS  G+YLEPLL+ S      +FYIP   N+L
Sbjct: 58  -------LEKPEW-------LPYLIALDMSRAGYYLEPLLETS------IFYIPTSVNQL 97

Query: 162 PQWFPMLYCYLAIVIVVKNKDFPILFRFHVMMGMLLEIAMQIVWVTSNFMPLIHFKGTLG 221
           P WFP LY YLAI +VVK +DFP++ RFHVMMGMLLE A QIV V SN+MPLIHFKGTLG
Sbjct: 98  PTWFPFLYIYLAIELVVKYRDFPLILRFHVMMGMLLETAFQIVSVASNYMPLIHFKGTLG 157

Query: 222 MYYWAGVAVAYIVMMMHCIRCALLGTFVKIPLLSESAFLHSLFSLGGFQRPF 273
           MYYWAG+A+AYIV++MH IRCALLGTF  IP++SESA LH LF++GGFQRPF
Sbjct: 158 MYYWAGLALAYIVIIMHSIRCALLGTFSNIPVISESALLHCLFNIGGFQRPF 209


>Medtr4g011960.1 | Tic20 family import component | HC |
           chr4:3156456-3153354 | 20130731
          Length = 256

 Score =  125 bits (315), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 96/165 (58%), Gaps = 7/165 (4%)

Query: 101 SGFRIPANSEKPEWWWRTLSCIPYLIALQM----SATGFYLEPLLDKSRIFRSLLFYIPG 156
           +GF+ P  + KP WWWRTL+CIPYL+ +      + T + L P ++         F   G
Sbjct: 90  AGFKFPPMTRKPRWWWRTLACIPYLLPIHQVWMYAKTAYNLHPFIEAFEFITYPFFMSIG 149

Query: 157 VYNRLPQWFPMLYCYLAIVIVVKNKDFPILFRFHVMMGMLLEIAMQIVWVTSNFMPLIHF 216
               LP+W  + Y  +A + +V+ K++P  FRFHV +GML+EIA+Q+  + S +MP   +
Sbjct: 150 ---SLPRWSLIAYFLIAYITIVRRKEWPHFFRFHVAVGMLIEIALQVTGLVSRWMPPAFY 206

Query: 217 KGTLGMYYWAGVAVAYIVMMMHCIRCALLGTFVKIPLLSESAFLH 261
            G+LGM++W      Y+   + C+RCAL G +  IP + ++A++ 
Sbjct: 207 WGSLGMHFWTTAFFLYLFTSIECVRCALTGMYADIPFVCDAAYIQ 251