Miyakogusa Predicted Gene

Lj3g3v2769370.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2769370.1 Non Characterized Hit- tr|B9RW76|B9RW76_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,47.83,0.0000000000002,DUF3774,Protein of unknown function
wound-induced,CUFF.44600.1
         (82 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g090020.1 | wound-responsive family protein | HC | chr2:38...   118   2e-27
Medtr2g090010.1 | DUF3774 domain protein | HC | chr2:38089542-38...   113   3e-26
Medtr2g090015.1 | DUF3774 domain protein | HC | chr2:38092576-38...   105   1e-23

>Medtr2g090020.1 | wound-responsive family protein | HC |
          chr2:38095739-38096459 | 20130731
          Length = 87

 Score =  118 bits (295), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 59/87 (67%), Positives = 72/87 (82%), Gaps = 5/87 (5%)

Query: 1  MSYLNRVWVAATVAVAQGHTDSGRKCKTAVGSIHQNRSRLF-AGVVGS--GVTGAMAGN- 56
          MSYLNRVW+AATVAVAQGHTD G KCKTAVGSIHQNR+RLF AG +     ++G +  + 
Sbjct: 1  MSYLNRVWMAATVAVAQGHTDPGHKCKTAVGSIHQNRTRLFSAGSLSDLRPLSGVVVSDM 60

Query: 57 -PDAEDRLRQTDESLRKVMYMNCWGQG 82
            +A+++LR+TD+SLRKVMYMNCWGQG
Sbjct: 61 SSEADEKLRRTDDSLRKVMYMNCWGQG 87


>Medtr2g090010.1 | DUF3774 domain protein | HC |
          chr2:38089542-38090819 | 20130731
          Length = 90

 Score =  113 bits (283), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 55/90 (61%), Positives = 66/90 (73%), Gaps = 8/90 (8%)

Query: 1  MSYLNRVWVAATVAVAQGHTDSGRKCKTAVGSIHQNRSRLFAG--------VVGSGVTGA 52
          MSYLNRVW+AATVAVAQGHTD   KCKTA+G+IHQNR+RLF+          + S V   
Sbjct: 1  MSYLNRVWMAATVAVAQGHTDPIYKCKTALGTIHQNRTRLFSAGGALSALLPLSSVVVSD 60

Query: 53 MAGNPDAEDRLRQTDESLRKVMYMNCWGQG 82
             +   E++LRQTD+SL+KVMYMNCWGQG
Sbjct: 61 ATVSSKVEEKLRQTDDSLQKVMYMNCWGQG 90


>Medtr2g090015.1 | DUF3774 domain protein | HC |
          chr2:38092576-38093398 | 20130731
          Length = 91

 Score =  105 bits (261), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 49/91 (53%), Positives = 66/91 (72%), Gaps = 9/91 (9%)

Query: 1  MSYLNRVWVAATVAVAQGHTDSGRKCKTAVGSIHQNRSRLFAG---------VVGSGVTG 51
          MSY+NRVW+AAT+AVAQGHT+    CK+A+G+IHQNR+RLF+          +    V+ 
Sbjct: 1  MSYMNRVWMAATMAVAQGHTEPIHNCKSALGTIHQNRTRLFSAGGALSALLPLSSVFVSE 60

Query: 52 AMAGNPDAEDRLRQTDESLRKVMYMNCWGQG 82
          A   + + + +LRQTD+SL+KVMYMNCWGQG
Sbjct: 61 ATVVSSEPKKKLRQTDDSLQKVMYMNCWGQG 91