Miyakogusa Predicted Gene

Lj3g3v2737500.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2737500.1 tr|D2X656|D2X656_ARTAN KAKTUS 1 (Fragment)
OS=Artemisia annua PE=2 SV=1,50,1e-18,HECT,HECT; seg,NULL; HECT
UBIQUITIN-PROTEIN LIGASE 3 (KAKTUS PROTEIN),NULL; HECT DOMAIN
UBIQUITIN-PR,gene.g49589.t1.1
         (228 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g066940.8 | E3 ubiquitin-protein ligase | HC | chr1:287815...   107   1e-23
Medtr1g066940.3 | E3 ubiquitin-protein ligase | HC | chr1:287815...   107   1e-23
Medtr1g066940.10 | E3 ubiquitin-protein ligase | HC | chr1:28781...   107   1e-23
Medtr1g066940.9 | E3 ubiquitin-protein ligase | HC | chr1:287815...   107   1e-23
Medtr1g066940.5 | E3 ubiquitin-protein ligase | HC | chr1:287815...   107   1e-23
Medtr1g066940.1 | E3 ubiquitin-protein ligase | HC | chr1:287815...   107   1e-23
Medtr1g066940.2 | E3 ubiquitin-protein ligase | HC | chr1:287815...   107   1e-23
Medtr1g066940.7 | E3 ubiquitin-protein ligase | HC | chr1:287813...   107   1e-23
Medtr1g066940.6 | E3 ubiquitin-protein ligase | HC | chr1:287815...   107   1e-23
Medtr1g066940.4 | E3 ubiquitin-protein ligase | HC | chr1:287815...   107   1e-23
Medtr4g073370.3 | E3 ubiquitin-protein ligase | HC | chr4:277808...    89   4e-18
Medtr4g073370.1 | E3 ubiquitin-protein ligase | HC | chr4:277808...    89   4e-18
Medtr4g073370.2 | E3 ubiquitin-protein ligase | HC | chr4:277807...    89   4e-18

>Medtr1g066940.8 | E3 ubiquitin-protein ligase | HC |
            chr1:28781572-28771167 | 20130731
          Length = 1505

 Score =  107 bits (266), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 58/104 (55%), Positives = 71/104 (68%), Gaps = 10/104 (9%)

Query: 124  FAQGYIVGRALQDGRILDLNFSKAFYKLIIKKDLFLYDVESIDATLGRTMKEFHALASRK 183
            F  G +V +ALQDGR+LDL+FSKAFYKLI+ K+L+LYD++S+D  LGR + EF AL +RK
Sbjct: 1264 FLLGQVVAKALQDGRVLDLHFSKAFYKLILGKELYLYDIQSLDPELGRVLHEFQALVNRK 1323

Query: 184  KHLPSAQ---------LSFRGSGIEDLCLTFTSVPGCPDTDLFS 218
              L S           LSFR S IEDLCL FT +PG PD  L S
Sbjct: 1324 FCLESVCEGNSELEQGLSFRDSRIEDLCLDFT-LPGYPDIVLAS 1366


>Medtr1g066940.3 | E3 ubiquitin-protein ligase | HC |
            chr1:28781572-28771186 | 20130731
          Length = 1505

 Score =  107 bits (266), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 58/104 (55%), Positives = 71/104 (68%), Gaps = 10/104 (9%)

Query: 124  FAQGYIVGRALQDGRILDLNFSKAFYKLIIKKDLFLYDVESIDATLGRTMKEFHALASRK 183
            F  G +V +ALQDGR+LDL+FSKAFYKLI+ K+L+LYD++S+D  LGR + EF AL +RK
Sbjct: 1264 FLLGQVVAKALQDGRVLDLHFSKAFYKLILGKELYLYDIQSLDPELGRVLHEFQALVNRK 1323

Query: 184  KHLPSAQ---------LSFRGSGIEDLCLTFTSVPGCPDTDLFS 218
              L S           LSFR S IEDLCL FT +PG PD  L S
Sbjct: 1324 FCLESVCEGNSELEQGLSFRDSRIEDLCLDFT-LPGYPDIVLAS 1366


>Medtr1g066940.10 | E3 ubiquitin-protein ligase | HC |
            chr1:28781346-28771167 | 20130731
          Length = 1505

 Score =  107 bits (266), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 58/104 (55%), Positives = 71/104 (68%), Gaps = 10/104 (9%)

Query: 124  FAQGYIVGRALQDGRILDLNFSKAFYKLIIKKDLFLYDVESIDATLGRTMKEFHALASRK 183
            F  G +V +ALQDGR+LDL+FSKAFYKLI+ K+L+LYD++S+D  LGR + EF AL +RK
Sbjct: 1264 FLLGQVVAKALQDGRVLDLHFSKAFYKLILGKELYLYDIQSLDPELGRVLHEFQALVNRK 1323

Query: 184  KHLPSAQ---------LSFRGSGIEDLCLTFTSVPGCPDTDLFS 218
              L S           LSFR S IEDLCL FT +PG PD  L S
Sbjct: 1324 FCLESVCEGNSELEQGLSFRDSRIEDLCLDFT-LPGYPDIVLAS 1366


>Medtr1g066940.9 | E3 ubiquitin-protein ligase | HC |
            chr1:28781572-28771167 | 20130731
          Length = 1505

 Score =  107 bits (266), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 58/104 (55%), Positives = 71/104 (68%), Gaps = 10/104 (9%)

Query: 124  FAQGYIVGRALQDGRILDLNFSKAFYKLIIKKDLFLYDVESIDATLGRTMKEFHALASRK 183
            F  G +V +ALQDGR+LDL+FSKAFYKLI+ K+L+LYD++S+D  LGR + EF AL +RK
Sbjct: 1264 FLLGQVVAKALQDGRVLDLHFSKAFYKLILGKELYLYDIQSLDPELGRVLHEFQALVNRK 1323

Query: 184  KHLPSAQ---------LSFRGSGIEDLCLTFTSVPGCPDTDLFS 218
              L S           LSFR S IEDLCL FT +PG PD  L S
Sbjct: 1324 FCLESVCEGNSELEQGLSFRDSRIEDLCLDFT-LPGYPDIVLAS 1366


>Medtr1g066940.5 | E3 ubiquitin-protein ligase | HC |
            chr1:28781562-28771195 | 20130731
          Length = 1505

 Score =  107 bits (266), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 58/104 (55%), Positives = 71/104 (68%), Gaps = 10/104 (9%)

Query: 124  FAQGYIVGRALQDGRILDLNFSKAFYKLIIKKDLFLYDVESIDATLGRTMKEFHALASRK 183
            F  G +V +ALQDGR+LDL+FSKAFYKLI+ K+L+LYD++S+D  LGR + EF AL +RK
Sbjct: 1264 FLLGQVVAKALQDGRVLDLHFSKAFYKLILGKELYLYDIQSLDPELGRVLHEFQALVNRK 1323

Query: 184  KHLPSAQ---------LSFRGSGIEDLCLTFTSVPGCPDTDLFS 218
              L S           LSFR S IEDLCL FT +PG PD  L S
Sbjct: 1324 FCLESVCEGNSELEQGLSFRDSRIEDLCLDFT-LPGYPDIVLAS 1366


>Medtr1g066940.1 | E3 ubiquitin-protein ligase | HC |
            chr1:28781562-28771167 | 20130731
          Length = 1549

 Score =  107 bits (266), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 58/104 (55%), Positives = 71/104 (68%), Gaps = 10/104 (9%)

Query: 124  FAQGYIVGRALQDGRILDLNFSKAFYKLIIKKDLFLYDVESIDATLGRTMKEFHALASRK 183
            F  G +V +ALQDGR+LDL+FSKAFYKLI+ K+L+LYD++S+D  LGR + EF AL +RK
Sbjct: 1264 FLLGQVVAKALQDGRVLDLHFSKAFYKLILGKELYLYDIQSLDPELGRVLHEFQALVNRK 1323

Query: 184  KHLPSAQ---------LSFRGSGIEDLCLTFTSVPGCPDTDLFS 218
              L S           LSFR S IEDLCL FT +PG PD  L S
Sbjct: 1324 FCLESVCEGNSELEQGLSFRDSRIEDLCLDFT-LPGYPDIVLAS 1366


>Medtr1g066940.2 | E3 ubiquitin-protein ligase | HC |
            chr1:28781572-28771167 | 20130731
          Length = 1549

 Score =  107 bits (266), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 58/104 (55%), Positives = 71/104 (68%), Gaps = 10/104 (9%)

Query: 124  FAQGYIVGRALQDGRILDLNFSKAFYKLIIKKDLFLYDVESIDATLGRTMKEFHALASRK 183
            F  G +V +ALQDGR+LDL+FSKAFYKLI+ K+L+LYD++S+D  LGR + EF AL +RK
Sbjct: 1264 FLLGQVVAKALQDGRVLDLHFSKAFYKLILGKELYLYDIQSLDPELGRVLHEFQALVNRK 1323

Query: 184  KHLPSAQ---------LSFRGSGIEDLCLTFTSVPGCPDTDLFS 218
              L S           LSFR S IEDLCL FT +PG PD  L S
Sbjct: 1324 FCLESVCEGNSELEQGLSFRDSRIEDLCLDFT-LPGYPDIVLAS 1366


>Medtr1g066940.7 | E3 ubiquitin-protein ligase | HC |
            chr1:28781346-28771167 | 20130731
          Length = 1549

 Score =  107 bits (266), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 58/104 (55%), Positives = 71/104 (68%), Gaps = 10/104 (9%)

Query: 124  FAQGYIVGRALQDGRILDLNFSKAFYKLIIKKDLFLYDVESIDATLGRTMKEFHALASRK 183
            F  G +V +ALQDGR+LDL+FSKAFYKLI+ K+L+LYD++S+D  LGR + EF AL +RK
Sbjct: 1264 FLLGQVVAKALQDGRVLDLHFSKAFYKLILGKELYLYDIQSLDPELGRVLHEFQALVNRK 1323

Query: 184  KHLPSAQ---------LSFRGSGIEDLCLTFTSVPGCPDTDLFS 218
              L S           LSFR S IEDLCL FT +PG PD  L S
Sbjct: 1324 FCLESVCEGNSELEQGLSFRDSRIEDLCLDFT-LPGYPDIVLAS 1366


>Medtr1g066940.6 | E3 ubiquitin-protein ligase | HC |
            chr1:28781572-28771195 | 20130731
          Length = 1543

 Score =  107 bits (266), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 58/104 (55%), Positives = 71/104 (68%), Gaps = 10/104 (9%)

Query: 124  FAQGYIVGRALQDGRILDLNFSKAFYKLIIKKDLFLYDVESIDATLGRTMKEFHALASRK 183
            F  G +V +ALQDGR+LDL+FSKAFYKLI+ K+L+LYD++S+D  LGR + EF AL +RK
Sbjct: 1264 FLLGQVVAKALQDGRVLDLHFSKAFYKLILGKELYLYDIQSLDPELGRVLHEFQALVNRK 1323

Query: 184  KHLPSAQ---------LSFRGSGIEDLCLTFTSVPGCPDTDLFS 218
              L S           LSFR S IEDLCL FT +PG PD  L S
Sbjct: 1324 FCLESVCEGNSELEQGLSFRDSRIEDLCLDFT-LPGYPDIVLAS 1366


>Medtr1g066940.4 | E3 ubiquitin-protein ligase | HC |
            chr1:28781562-28771195 | 20130731
          Length = 1543

 Score =  107 bits (266), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 58/104 (55%), Positives = 71/104 (68%), Gaps = 10/104 (9%)

Query: 124  FAQGYIVGRALQDGRILDLNFSKAFYKLIIKKDLFLYDVESIDATLGRTMKEFHALASRK 183
            F  G +V +ALQDGR+LDL+FSKAFYKLI+ K+L+LYD++S+D  LGR + EF AL +RK
Sbjct: 1264 FLLGQVVAKALQDGRVLDLHFSKAFYKLILGKELYLYDIQSLDPELGRVLHEFQALVNRK 1323

Query: 184  KHLPSAQ---------LSFRGSGIEDLCLTFTSVPGCPDTDLFS 218
              L S           LSFR S IEDLCL FT +PG PD  L S
Sbjct: 1324 FCLESVCEGNSELEQGLSFRDSRIEDLCLDFT-LPGYPDIVLAS 1366


>Medtr4g073370.3 | E3 ubiquitin-protein ligase | HC |
            chr4:27780814-27770199 | 20130731
          Length = 1881

 Score = 89.0 bits (219), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 48/106 (45%), Positives = 68/106 (64%), Gaps = 10/106 (9%)

Query: 127  GYIVGRALQDGRILDLNFSKAFYKLIIKKDLFLYDVESIDATLGRTMKEFHALASRKKHL 186
            G +V +ALQDGR+LDL  S AFYKL++ +DL L+D+  +DA LG+T++E +AL  RK ++
Sbjct: 1588 GRVVAKALQDGRLLDLPLSVAFYKLVLGQDLDLHDILYVDAELGKTLQELNALVCRKHNI 1647

Query: 187  PS---------AQLSFRGSGIEDLCLTFTSVPGCPDTDLFSTDSDV 223
             S         + L +RG+ I DLCL FT +PG P+  L   D  V
Sbjct: 1648 ESIGGGNTGTVSNLHYRGAPIADLCLDFT-LPGYPEYTLKPGDEIV 1692


>Medtr4g073370.1 | E3 ubiquitin-protein ligase | HC |
            chr4:27780814-27770199 | 20130731
          Length = 1881

 Score = 89.0 bits (219), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 48/106 (45%), Positives = 68/106 (64%), Gaps = 10/106 (9%)

Query: 127  GYIVGRALQDGRILDLNFSKAFYKLIIKKDLFLYDVESIDATLGRTMKEFHALASRKKHL 186
            G +V +ALQDGR+LDL  S AFYKL++ +DL L+D+  +DA LG+T++E +AL  RK ++
Sbjct: 1588 GRVVAKALQDGRLLDLPLSVAFYKLVLGQDLDLHDILYVDAELGKTLQELNALVCRKHNI 1647

Query: 187  PS---------AQLSFRGSGIEDLCLTFTSVPGCPDTDLFSTDSDV 223
             S         + L +RG+ I DLCL FT +PG P+  L   D  V
Sbjct: 1648 ESIGGGNTGTVSNLHYRGAPIADLCLDFT-LPGYPEYTLKPGDEIV 1692


>Medtr4g073370.2 | E3 ubiquitin-protein ligase | HC |
            chr4:27780793-27770200 | 20130731
          Length = 1881

 Score = 89.0 bits (219), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 48/106 (45%), Positives = 68/106 (64%), Gaps = 10/106 (9%)

Query: 127  GYIVGRALQDGRILDLNFSKAFYKLIIKKDLFLYDVESIDATLGRTMKEFHALASRKKHL 186
            G +V +ALQDGR+LDL  S AFYKL++ +DL L+D+  +DA LG+T++E +AL  RK ++
Sbjct: 1588 GRVVAKALQDGRLLDLPLSVAFYKLVLGQDLDLHDILYVDAELGKTLQELNALVCRKHNI 1647

Query: 187  PS---------AQLSFRGSGIEDLCLTFTSVPGCPDTDLFSTDSDV 223
             S         + L +RG+ I DLCL FT +PG P+  L   D  V
Sbjct: 1648 ESIGGGNTGTVSNLHYRGAPIADLCLDFT-LPGYPEYTLKPGDEIV 1692