Miyakogusa Predicted Gene

Lj3g3v2737470.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2737470.1 Non Characterized Hit- tr|B9RDA1|B9RDA1_RICCO
Transketolase, putative OS=Ricinus communis
GN=RCOM_16,90.69,0,TRANSKETOLASE_2,Transketolase binding site;
Transketolase_N,Transketolase, N-terminal; Transket_pyr,,CUFF.45175.1
         (505 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g024630.1 | plastid transketolase | HC | chr4:8338986-8333...   917   0.0  
Medtr4g024630.2 | plastid transketolase | HC | chr4:8337789-8334...   916   0.0  
Medtr5g059410.1 | plastid transketolase | HC | chr5:24645325-246...   905   0.0  
Medtr1g116120.1 | plastid transketolase | HC | chr1:52485234-524...   905   0.0  
Medtr0776s0010.1 | transketolase 1, thiamin-binding protein | LC...   405   e-113
Medtr8g068265.1 | 1-deoxy-D-xylulose-5-phosphate synthase | HC |...    52   2e-06

>Medtr4g024630.1 | plastid transketolase | HC | chr4:8338986-8333916
           | 20130731
          Length = 735

 Score =  917 bits (2371), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 447/505 (88%), Positives = 468/505 (92%)

Query: 1   MEGIANEACSLAGHWGLGKLIAFYDDNHISIDGNTDIAFTESVDSRFEGLGWHVIWVKNG 60
           MEGIANEACSLAGHWGLGKLIAFYDDNHISIDG+T+IAFTESV+ RFEGLGWHVIWVKNG
Sbjct: 231 MEGIANEACSLAGHWGLGKLIAFYDDNHISIDGDTEIAFTESVEKRFEGLGWHVIWVKNG 290

Query: 61  NNGYDDIRAAIKEAKAVPDKPTLIKVTTTIGFGSPNKANSYSVHGSALGAKEVEATRANL 120
           N G+D+IRAAIKEAKAV D+PTLIK TTTIG+GSPNK+NSYSVHGSALGAKEV+ATR NL
Sbjct: 291 NTGFDEIRAAIKEAKAVKDRPTLIKFTTTIGYGSPNKSNSYSVHGSALGAKEVDATRNNL 350

Query: 121 AWPHEPFHVPEDVKKHWSRHIPEGAALEAEWNXXXXXXXXXXXXXXXXXXSIINGDLPAG 180
            WP+EPFHVPEDVKKHWSRHI EGAALE+EWN                  SII+GDLPAG
Sbjct: 351 GWPYEPFHVPEDVKKHWSRHIREGAALESEWNAKFADYEKKYKEEAAVLKSIISGDLPAG 410

Query: 181 WEKALPTYTPETPADATRNLSQTNLNALAKVLPGLLGGSADLASSNMTLLKMFGNFQKDT 240
           WEKALPTYTPE PADATRNLSQ NLNALA VLPGL+GGSADLASSNMTLLK FG+FQ D+
Sbjct: 411 WEKALPTYTPEIPADATRNLSQQNLNALANVLPGLIGGSADLASSNMTLLKKFGDFQSDS 470

Query: 241 PAERNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRGAIRLSALSEAGVIYV 300
           PAERNVRFGVREHGMGAICNGIALHS GLIPYCATFFVFTDYMRGAIRLSALSEAGVIYV
Sbjct: 471 PAERNVRFGVREHGMGAICNGIALHSRGLIPYCATFFVFTDYMRGAIRLSALSEAGVIYV 530

Query: 301 MTHDSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVVNRKRPSILAL 360
           MTHDSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAV+NRKRPSILAL
Sbjct: 531 MTHDSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVLNRKRPSILAL 590

Query: 361 SRQKLPNLPGTSIEGVEKGGYTISDNSTGNKPDVILIGTGSELEIAAKAADDLRKEGKAV 420
           SRQKLPNL GTSIEGVEKGGY +SDNSTGNKPDVILIGTGSELEIA KA +DLRKEGKAV
Sbjct: 591 SRQKLPNLAGTSIEGVEKGGYIVSDNSTGNKPDVILIGTGSELEIAYKAGEDLRKEGKAV 650

Query: 421 RVVSFVSWELFDEQSEAYKESVLPSAVSARVSIEAGSTFGWEKIVGSKGKAIGIDHFGAS 480
           RVVSFVSWELFDEQS+AYKESVLP+AV+ARVSIEAGSTFGWEKIVGSKGKAIGID FGAS
Sbjct: 651 RVVSFVSWELFDEQSQAYKESVLPTAVTARVSIEAGSTFGWEKIVGSKGKAIGIDRFGAS 710

Query: 481 APAGRIYKEFGITKEAVIAAAKELI 505
           APAG IYKEFGITKEAVIAAAKELI
Sbjct: 711 APAGTIYKEFGITKEAVIAAAKELI 735


>Medtr4g024630.2 | plastid transketolase | HC | chr4:8337789-8334009
           | 20130731
          Length = 581

 Score =  916 bits (2368), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 447/505 (88%), Positives = 468/505 (92%)

Query: 1   MEGIANEACSLAGHWGLGKLIAFYDDNHISIDGNTDIAFTESVDSRFEGLGWHVIWVKNG 60
           MEGIANEACSLAGHWGLGKLIAFYDDNHISIDG+T+IAFTESV+ RFEGLGWHVIWVKNG
Sbjct: 77  MEGIANEACSLAGHWGLGKLIAFYDDNHISIDGDTEIAFTESVEKRFEGLGWHVIWVKNG 136

Query: 61  NNGYDDIRAAIKEAKAVPDKPTLIKVTTTIGFGSPNKANSYSVHGSALGAKEVEATRANL 120
           N G+D+IRAAIKEAKAV D+PTLIK TTTIG+GSPNK+NSYSVHGSALGAKEV+ATR NL
Sbjct: 137 NTGFDEIRAAIKEAKAVKDRPTLIKFTTTIGYGSPNKSNSYSVHGSALGAKEVDATRNNL 196

Query: 121 AWPHEPFHVPEDVKKHWSRHIPEGAALEAEWNXXXXXXXXXXXXXXXXXXSIINGDLPAG 180
            WP+EPFHVPEDVKKHWSRHI EGAALE+EWN                  SII+GDLPAG
Sbjct: 197 GWPYEPFHVPEDVKKHWSRHIREGAALESEWNAKFADYEKKYKEEAAVLKSIISGDLPAG 256

Query: 181 WEKALPTYTPETPADATRNLSQTNLNALAKVLPGLLGGSADLASSNMTLLKMFGNFQKDT 240
           WEKALPTYTPE PADATRNLSQ NLNALA VLPGL+GGSADLASSNMTLLK FG+FQ D+
Sbjct: 257 WEKALPTYTPEIPADATRNLSQQNLNALANVLPGLIGGSADLASSNMTLLKKFGDFQSDS 316

Query: 241 PAERNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRGAIRLSALSEAGVIYV 300
           PAERNVRFGVREHGMGAICNGIALHS GLIPYCATFFVFTDYMRGAIRLSALSEAGVIYV
Sbjct: 317 PAERNVRFGVREHGMGAICNGIALHSRGLIPYCATFFVFTDYMRGAIRLSALSEAGVIYV 376

Query: 301 MTHDSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVVNRKRPSILAL 360
           MTHDSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAV+NRKRPSILAL
Sbjct: 377 MTHDSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVLNRKRPSILAL 436

Query: 361 SRQKLPNLPGTSIEGVEKGGYTISDNSTGNKPDVILIGTGSELEIAAKAADDLRKEGKAV 420
           SRQKLPNL GTSIEGVEKGGY +SDNSTGNKPDVILIGTGSELEIA KA +DLRKEGKAV
Sbjct: 437 SRQKLPNLAGTSIEGVEKGGYIVSDNSTGNKPDVILIGTGSELEIAYKAGEDLRKEGKAV 496

Query: 421 RVVSFVSWELFDEQSEAYKESVLPSAVSARVSIEAGSTFGWEKIVGSKGKAIGIDHFGAS 480
           RVVSFVSWELFDEQS+AYKESVLP+AV+ARVSIEAGSTFGWEKIVGSKGKAIGID FGAS
Sbjct: 497 RVVSFVSWELFDEQSQAYKESVLPTAVTARVSIEAGSTFGWEKIVGSKGKAIGIDRFGAS 556

Query: 481 APAGRIYKEFGITKEAVIAAAKELI 505
           APAG IYKEFGITKEAVIAAAKELI
Sbjct: 557 APAGTIYKEFGITKEAVIAAAKELI 581


>Medtr5g059410.1 | plastid transketolase | HC |
           chr5:24645325-24641837 | 20130731
          Length = 735

 Score =  905 bits (2340), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/504 (86%), Positives = 463/504 (91%)

Query: 1   MEGIANEACSLAGHWGLGKLIAFYDDNHISIDGNTDIAFTESVDSRFEGLGWHVIWVKNG 60
           MEGI+NEACSLAGHWGLGKLIAFYDDNHISIDG+T+IAFTE+VD RFE LGWHVIWVKNG
Sbjct: 231 MEGISNEACSLAGHWGLGKLIAFYDDNHISIDGDTEIAFTENVDQRFEALGWHVIWVKNG 290

Query: 61  NNGYDDIRAAIKEAKAVPDKPTLIKVTTTIGFGSPNKANSYSVHGSALGAKEVEATRANL 120
           N GYD+IRAAIKEAKAV DKPTLIKVTTTIGFGSPNKANSYSVHG+ALGAKEV+ATR NL
Sbjct: 291 NTGYDEIRAAIKEAKAVTDKPTLIKVTTTIGFGSPNKANSYSVHGAALGAKEVDATRQNL 350

Query: 121 AWPHEPFHVPEDVKKHWSRHIPEGAALEAEWNXXXXXXXXXXXXXXXXXXSIINGDLPAG 180
            WP+EPFHVPEDVKKHWSRH PEGAALEAEWN                  +IIN +LPA 
Sbjct: 351 GWPYEPFHVPEDVKKHWSRHTPEGAALEAEWNAKFAEYEKKYKEEAAELKAIINRELPAD 410

Query: 181 WEKALPTYTPETPADATRNLSQTNLNALAKVLPGLLGGSADLASSNMTLLKMFGNFQKDT 240
           WEKALPTYTPETPADATRNLSQ NLNALAKVLPGL+GGSADLASSNMTLLK FG+FQK T
Sbjct: 411 WEKALPTYTPETPADATRNLSQQNLNALAKVLPGLIGGSADLASSNMTLLKSFGDFQKAT 470

Query: 241 PAERNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRGAIRLSALSEAGVIYV 300
           P ERNVRFGVREH MGAICNGIALHSPG IPYCATFFVFTDYMR AIR+SAL EAGVIYV
Sbjct: 471 PEERNVRFGVREHAMGAICNGIALHSPGFIPYCATFFVFTDYMRAAIRISALCEAGVIYV 530

Query: 301 MTHDSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVVNRKRPSILAL 360
           MTHDSIGLGEDGPTHQPIEHLASFRAMPN+LMLRPADGNETAG+Y+VAV+N+KRPSILAL
Sbjct: 531 MTHDSIGLGEDGPTHQPIEHLASFRAMPNVLMLRPADGNETAGSYRVAVLNQKRPSILAL 590

Query: 361 SRQKLPNLPGTSIEGVEKGGYTISDNSTGNKPDVILIGTGSELEIAAKAADDLRKEGKAV 420
           SRQKLPNLPGTSIEGVEKGGYTISDNS+GNKPDVILIGTGSELEIAA AADDLRKEGK V
Sbjct: 591 SRQKLPNLPGTSIEGVEKGGYTISDNSSGNKPDVILIGTGSELEIAAAAADDLRKEGKTV 650

Query: 421 RVVSFVSWELFDEQSEAYKESVLPSAVSARVSIEAGSTFGWEKIVGSKGKAIGIDHFGAS 480
           RVVSFVSWELFD+QS+ YKESVLP++V+ARVSIEAGSTFGW KIVGSKGK IGID FGAS
Sbjct: 651 RVVSFVSWELFDDQSDEYKESVLPASVTARVSIEAGSTFGWHKIVGSKGKTIGIDRFGAS 710

Query: 481 APAGRIYKEFGITKEAVIAAAKEL 504
           APAG+IYKE+GITKEAVI+AAKE+
Sbjct: 711 APAGKIYKEYGITKEAVISAAKEV 734


>Medtr1g116120.1 | plastid transketolase | HC |
           chr1:52485234-52489276 | 20130731
          Length = 735

 Score =  905 bits (2340), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/504 (86%), Positives = 463/504 (91%)

Query: 1   MEGIANEACSLAGHWGLGKLIAFYDDNHISIDGNTDIAFTESVDSRFEGLGWHVIWVKNG 60
           MEGI+NEACSLAGHWGLGKLIAFYDDNHISIDG+T+IAFTE+VD RFE LGWHVIWVKNG
Sbjct: 231 MEGISNEACSLAGHWGLGKLIAFYDDNHISIDGDTEIAFTENVDQRFEALGWHVIWVKNG 290

Query: 61  NNGYDDIRAAIKEAKAVPDKPTLIKVTTTIGFGSPNKANSYSVHGSALGAKEVEATRANL 120
           N GYD+IRAAIKEAKAV DKPTLIKVTTTIGFGSPNKANSYSVHG+ALGAKEV+ATR NL
Sbjct: 291 NTGYDEIRAAIKEAKAVTDKPTLIKVTTTIGFGSPNKANSYSVHGAALGAKEVDATRQNL 350

Query: 121 AWPHEPFHVPEDVKKHWSRHIPEGAALEAEWNXXXXXXXXXXXXXXXXXXSIINGDLPAG 180
            WP+EPFHVPEDVKKHWSRH PEGAALEAEWN                  +IIN +LPA 
Sbjct: 351 GWPYEPFHVPEDVKKHWSRHTPEGAALEAEWNAKFAEYEKKYKEEAAELKAIINRELPAD 410

Query: 181 WEKALPTYTPETPADATRNLSQTNLNALAKVLPGLLGGSADLASSNMTLLKMFGNFQKDT 240
           WEKALPTYTPETPADATRNLSQ NLNALAKVLPGL+GGSADLASSNMTLLK FG+FQK T
Sbjct: 411 WEKALPTYTPETPADATRNLSQQNLNALAKVLPGLIGGSADLASSNMTLLKSFGDFQKAT 470

Query: 241 PAERNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRGAIRLSALSEAGVIYV 300
           P ERNVRFGVREH MGAICNGIALHSPG IPYCATFFVFTDYMR AIR+SAL EAGVIYV
Sbjct: 471 PEERNVRFGVREHAMGAICNGIALHSPGFIPYCATFFVFTDYMRAAIRISALCEAGVIYV 530

Query: 301 MTHDSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVVNRKRPSILAL 360
           MTHDSIGLGEDGPTHQPIEHLASFRAMPN+LMLRPADGNETAG+Y+VAV+N+KRPSILAL
Sbjct: 531 MTHDSIGLGEDGPTHQPIEHLASFRAMPNVLMLRPADGNETAGSYRVAVLNQKRPSILAL 590

Query: 361 SRQKLPNLPGTSIEGVEKGGYTISDNSTGNKPDVILIGTGSELEIAAKAADDLRKEGKAV 420
           SRQKLPNLPGTSIEGVEKGGYTISDNS+GNKPDVILIGTGSELEIAA AADDLRKEGK V
Sbjct: 591 SRQKLPNLPGTSIEGVEKGGYTISDNSSGNKPDVILIGTGSELEIAAAAADDLRKEGKTV 650

Query: 421 RVVSFVSWELFDEQSEAYKESVLPSAVSARVSIEAGSTFGWEKIVGSKGKAIGIDHFGAS 480
           RVVSFVSWELFD+QS+ YKESVLP++V+ARVSIEAGSTFGW KIVGSKGK IGID FGAS
Sbjct: 651 RVVSFVSWELFDDQSDEYKESVLPASVTARVSIEAGSTFGWHKIVGSKGKTIGIDRFGAS 710

Query: 481 APAGRIYKEFGITKEAVIAAAKEL 504
           APAG+IYKE+GITKEAVI+AAKE+
Sbjct: 711 APAGKIYKEYGITKEAVISAAKEV 734


>Medtr0776s0010.1 | transketolase 1, thiamin-binding protein | LC |
            scaffold0776:6267-63 | 20130731
          Length = 1918

 Score =  405 bits (1041), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 235/504 (46%), Positives = 302/504 (59%), Gaps = 14/504 (2%)

Query: 1    MEGIANEACSLAGHWGLGKLIAFYDDNHISIDGNTDIAFTESVDSRFEGLGWHVIWVKNG 60
            MEGI++EA SLAG  GLGKLI FYDDN ISIDG+ +  FT+   +RF   GW+VI   +G
Sbjct: 1083 MEGISHEAGSLAGTLGLGKLICFYDDNGISIDGHVNGWFTDDTAARFSAYGWNVIGPIDG 1142

Query: 61   NNGYDDIRAAIKEAKAVPDKPTLIKVTTTIGFGSPNKANSYSVHGSALGAKEVEATRANL 120
            ++    + AAI++A A  ++P+LI   TTIG+GSPNKA+++ VHG+ LG  E+ ATR  L
Sbjct: 1143 HDAAA-VDAAIRDAHACDERPSLIICKTTIGWGSPNKADTHDVHGAPLGTDEIAATRDAL 1201

Query: 121  AWPHEPFHVPEDVKKHWSRHIPEGAALEAEWNXXXXXXXXXXXXXXXXXXSIINGDLPAG 180
             W H PF +P DV+  WS+    GAAL A W                     +  +LPA 
Sbjct: 1202 EWHHPPFEIPADVRASWSQR-ERGAALVANWEGLFESYRTGYPDEAAEFERRMRSELPAD 1260

Query: 181  W----EKALPTYTPETPADATRNLSQTNLNALAKVLPGLLGGSADLASSNMTLLKMFGNF 236
            W     + L      T   ATR  SQ  L  L   LP L GGSADL  SN+T +K     
Sbjct: 1261 WPSIARRLLEAARDVTSPTATRRSSQIALEVLVPELPELFGGSADLTGSNLTAVKASRTL 1320

Query: 237  QKDTPAERN---VRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRGAIRLSALS 293
                  +R    + +GVRE GM A+ NG+ALH  G IPY  TF VF+DY R AIR+SAL 
Sbjct: 1321 NGTPVVDRGANYMSYGVREFGMIAMMNGLALHG-GFIPYGGTFLVFSDYARNAIRMSALM 1379

Query: 294  EAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVVNRK 353
               VI+V+THDSIGLGEDGPTHQPIEH+AS R +PN+ + RP D  ETA A++VA+    
Sbjct: 1380 NRRVIHVLTHDSIGLGEDGPTHQPIEHVASLRLIPNLDVWRPCDTIETAIAWQVAIERVD 1439

Query: 354  RPSILALSRQKLPN--LPGTSIEGVEKGGYTISDNSTGNKPDVILIGTGSELEIAAKAAD 411
             PS L LSRQ LP        +E + +GGY +S+ + G  PDV+LI TGSE+ +A  A  
Sbjct: 1440 GPSALVLSRQNLPQSAQDDIQVERIRRGGYVLSE-AAGGSPDVVLIATGSEVALALDAQL 1498

Query: 412  DLRKEGKAVRVVSFVSWELFDEQSEAYKESVLPSAVSARVSIEAGSTFGWEKIVGSKGKA 471
             L  +G    VVS  S  +FD Q  AY+  VLP+ V  RV++EAG +  W K VG  G+ 
Sbjct: 1499 ALADKGVRASVVSMPSTTVFDRQDAAYRADVLPAGVR-RVAVEAGHSDFWHKYVGPDGRV 1557

Query: 472  IGIDHFGASAPAGRIYKEFGITKE 495
            IG+  FG SAPAG++Y  FG+T E
Sbjct: 1558 IGLTSFGESAPAGKLYSHFGLTVE 1581


>Medtr8g068265.1 | 1-deoxy-D-xylulose-5-phosphate synthase | HC |
           chr8:28466086-28471025 | 20130731
          Length = 711

 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 83/197 (42%), Gaps = 24/197 (12%)

Query: 236 FQKDTPAERNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRG---AIRLSAL 292
           FQK  P +R    G+ E        G+A  + GL P+CA +  F    RG    +    L
Sbjct: 427 FQKRFP-DRCFDVGIAEQHAVTFAAGLA--AEGLKPFCAIYSSF--LQRGYDQVVHDVDL 481

Query: 293 SEAGVIYVMTHDSIGL-GEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVVN 351
            +  V + M  D  GL G DGPTH     +     +PN++++ P+D  E       A   
Sbjct: 482 QKLPVRFAM--DRAGLVGADGPTHCGAFDITFMACLPNMIVMAPSDEAELMNMVATAAAI 539

Query: 352 RKRPSILALSR-----QKLP-NLPGTSIEGVEKGGYTISDNSTGNKPDVILIGTGSELEI 405
             RPS     R       LP N  GT +E + KG   +  +       V ++G G  ++ 
Sbjct: 540 DDRPSCFRFPRGNGIGANLPLNNKGTPLE-IGKGRILLEGSR------VAILGYGCMVQQ 592

Query: 406 AAKAADDLRKEGKAVRV 422
             KAA+ LR  G  V V
Sbjct: 593 CMKAAEMLRAVGVYVTV 609