Miyakogusa Predicted Gene

Lj3g3v2737430.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2737430.1 Non Characterized Hit- tr|C6T7D0|C6T7D0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.15097
PE,80.21,0,Ebp2,Eukaryotic rRNA processing; seg,NULL; SUBFAMILY NOT
NAMED,NULL; RRNA PROCESSING PROTEIN EBNA1-B,CUFF.44553.1
         (288 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g075400.1 | rRNA-processing EBP2-like protein | HC | chr8:...   318   6e-87
Medtr8g075400.2 | rRNA-processing EBP2-like protein | HC | chr8:...   306   1e-83
Medtr5g028350.1 | rRNA-processing EBP2-like protein | HC | chr5:...   306   2e-83

>Medtr8g075400.1 | rRNA-processing EBP2-like protein | HC |
           chr8:31891004-31890000 | 20130731
          Length = 277

 Score =  318 bits (814), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 174/286 (60%), Positives = 190/286 (66%), Gaps = 30/286 (10%)

Query: 3   PLVSDDTMVDGETEDRNXXXXXXXXXXXXXVKLAEPSKTAVYNRDGLLDKLGDISWPENV 62
           PLV+DDTM+DGE E  +             VKLAEPSKTAV NRD LLDKLGDISWPENV
Sbjct: 17  PLVNDDTMIDGEAEYLSEEMSPSESESEEDVKLAEPSKTAVNNRDALLDKLGDISWPENV 76

Query: 63  EWIHKLSIDIDQEEEVDVNDDLKRELAFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEM 122
           EWIHKLSIDIDQE+EVDVNDDL RELAFYTQALEGTRQAFEKLQS+GLPFLRPADYYAEM
Sbjct: 77  EWIHKLSIDIDQEQEVDVNDDLARELAFYTQALEGTRQAFEKLQSIGLPFLRPADYYAEM 136

Query: 123 VKTDSHMVKVKGRILXXXXXXXXXXXXXXXXXXXXXXXXVQAQKLKERAKQKKENIESVK 182
           VKTDSHM KVK R+L                        VQ+QKLKERAKQKK++IESVK
Sbjct: 137 VKTDSHMEKVKSRLLAEKQKMVEAEERRKAREAKRLSKEVQSQKLKERAKQKKDDIESVK 196

Query: 183 IWRKQRQQSGFADNGNDADSTFNFEDGKVFTRANKKRPGVXXXXXXXXXXXXXXXXXXXX 242
            WRKQRQQSGFAD+G  AD   +FEDGKVF R+ KKRPGV                    
Sbjct: 197 KWRKQRQQSGFADDG--ADKALDFEDGKVFERSKKKRPGV-------------------- 234

Query: 243 XXXEARESRYGFXXXXXXXXQNSADTTNDFKTFN-KGAVAGDRKRK 287
                 +   G         QN+ADTTNDF  F+ KGAV G +KRK
Sbjct: 235 -CLRVTDQEKGL------KKQNTADTTNDFGGFSKKGAVGGSKKRK 273


>Medtr8g075400.2 | rRNA-processing EBP2-like protein | HC |
           chr8:31892347-31889754 | 20130731
          Length = 259

 Score =  306 bits (785), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 155/220 (70%), Positives = 167/220 (75%), Gaps = 2/220 (0%)

Query: 3   PLVSDDTMVDGETEDRNXXXXXXXXXXXXXVKLAEPSKTAVYNRDGLLDKLGDISWPENV 62
           PLV+DDTM+DGE E  +             VKLAEPSKTAV NRD LLDKLGDISWPENV
Sbjct: 4   PLVNDDTMIDGEAEYLSEEMSPSESESEEDVKLAEPSKTAVNNRDALLDKLGDISWPENV 63

Query: 63  EWIHKLSIDIDQEEEVDVNDDLKRELAFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEM 122
           EWIHKLSIDIDQE+EVDVNDDL RELAFYTQALEGTRQAFEKLQS+GLPFLRPADYYAEM
Sbjct: 64  EWIHKLSIDIDQEQEVDVNDDLARELAFYTQALEGTRQAFEKLQSIGLPFLRPADYYAEM 123

Query: 123 VKTDSHMVKVKGRILXXXXXXXXXXXXXXXXXXXXXXXXVQAQKLKERAKQKKENIESVK 182
           VKTDSHM KVK R+L                        VQ+QKLKERAKQKK++IESVK
Sbjct: 124 VKTDSHMEKVKSRLLAEKQKMVEAEERRKAREAKRLSKEVQSQKLKERAKQKKDDIESVK 183

Query: 183 IWRKQRQQSGFADNGNDADSTFNFEDGKVFTRANKKRPGV 222
            WRKQRQQSGFAD+G  AD   +FEDGKVF R+ KKRPGV
Sbjct: 184 KWRKQRQQSGFADDG--ADKALDFEDGKVFERSKKKRPGV 221


>Medtr5g028350.1 | rRNA-processing EBP2-like protein | HC |
           chr5:11866124-11863546 | 20130731
          Length = 289

 Score =  306 bits (783), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 166/287 (57%), Positives = 191/287 (66%), Gaps = 2/287 (0%)

Query: 3   PLVSDDTMVDGETEDRNXXXXXXXXXXXXXVKLAEPSKTAVYNRDGLLDKLGDISWPENV 62
           PLV+ D M+D ETED +             VKLAEPSKTAV NRD +LDKLGDISWPENV
Sbjct: 4   PLVNGDPMIDDETEDLDEEMSPFESDSEEDVKLAEPSKTAVNNRDAILDKLGDISWPENV 63

Query: 63  EWIHKLSIDIDQEEEVDVNDDLKRELAFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEM 122
           +W HKLSIDIDQ +EVDVNDDL REL+FYTQALEGTRQAFEKL+SMGLPFLRPADYYAEM
Sbjct: 64  DWKHKLSIDIDQGQEVDVNDDLARELSFYTQALEGTRQAFEKLESMGLPFLRPADYYAEM 123

Query: 123 VKTDSHMVKVKGRILXXXXXXXXXXXXXXXXXXXXXXXXVQAQKLKERAKQKKENIESVK 182
           VK DSHM KVK R+L                        VQ+QKLKERAKQKK++IESVK
Sbjct: 124 VKGDSHMEKVKSRLLDEKRKMEEADERRKAREAKRLSKEVQSQKLKERAKQKKDDIESVK 183

Query: 183 IWRKQRQQSGFADNGNDADSTFNFEDGKVFTRANKKRPGVXXX-XXXXXXXXXXXXXXXX 241
            WRKQRQQSGFAD  +  D + +FEDGKVF R+ KKRPGV                    
Sbjct: 184 KWRKQRQQSGFADGADAPDKSLSFEDGKVFERSKKKRPGVSPGDRSGGKAKQAMGKGKKP 243

Query: 242 XXXXEARESRYGFXXXXXXXXQNSADTTNDFKTFNKGAVAGDRKRKR 288
               + + +++GF        QN+ADTTNDF  F+KG+ AG+ KRKR
Sbjct: 244 QKKRDTKNAKFGFGGRKGSKKQNTADTTNDFGGFSKGSAAGN-KRKR 289