Miyakogusa Predicted Gene

Lj3g3v2737370.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2737370.1 Non Characterized Hit- tr|F6HZK7|F6HZK7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,45.07,0.000000000001,VHS,VHS; no description,ENTH/VHS,CUFF.44543.1
         (77 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g097010.1 | ENTH/VHS/GAT family protein | HC | chr7:389582...    80   5e-16
Medtr5g007480.1 | protein transporter | HC | chr5:1376842-137261...    52   9e-08

>Medtr7g097010.1 | ENTH/VHS/GAT family protein | HC |
           chr7:38958252-38953937 | 20130731
          Length = 422

 Score = 79.7 bits (195), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 34/72 (47%), Positives = 50/72 (69%)

Query: 1   MQSHTLHLLESFGHNCDAFYTEVASQKLHEDLVRLVDNPHSDYSNRRRAFRLLMAWAESQ 60
           +Q H+L LLE+   NCD  ++E+AS+K+ +D+VRL++N   D  NRRRAF+L+ AW ESQ
Sbjct: 90  VQKHSLDLLETCAMNCDKVFSEIASEKVLDDMVRLIENNQGDGGNRRRAFQLVRAWGESQ 149

Query: 61  EVARGGAFRHVY 72
           ++A    F   Y
Sbjct: 150 DIAYLPVFSQTY 161


>Medtr5g007480.1 | protein transporter | HC | chr5:1376842-1372618 |
           20130731
          Length = 399

 Score = 52.4 bits (124), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 41/59 (69%)

Query: 1   MQSHTLHLLESFGHNCDAFYTEVASQKLHEDLVRLVDNPHSDYSNRRRAFRLLMAWAES 59
           +Q   L LLE+   NC+  ++EVA++++ +++VR++D+P +  +NR +A  ++ AW ES
Sbjct: 100 VQYLALVLLETVVKNCEKAFSEVAAERVLDEMVRVIDDPQTVVNNRNKALVMIEAWGES 158