Miyakogusa Predicted Gene

Lj3g3v2736240.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2736240.1 Non Characterized Hit- tr|I3T8Q2|I3T8Q2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,96.69,0,RIBOSOMAL
PROTEIN S15P/S13E,NULL; Ribosomal_S13_N,Ribosomal protein S13/S15,
N-terminal; Ribosomal_S,CUFF.44555.1
         (151 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g024550.1 | cytoplasmic ribosomal protein S13 | HC | chr4:...   293   3e-80
Medtr4g102170.1 | cytoplasmic ribosomal protein S13 | HC | chr4:...   291   1e-79
Medtr5g011910.1 | cytoplasmic ribosomal protein S13 | HC | chr5:...   288   1e-78
Medtr4g024265.1 | cytoplasmic ribosomal protein S13 | LC | chr4:...   221   2e-58

>Medtr4g024550.1 | cytoplasmic ribosomal protein S13 | HC |
           chr4:8276158-8279647 | 20130731
          Length = 151

 Score =  293 bits (751), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 143/151 (94%), Positives = 149/151 (98%)

Query: 1   MGRMHSGGKGISSSALPYKRSPPSWLKIASQDVEENICKFAKKGLTPSQIGVILRDSHGI 60
           MGRMHSGGKGISSSALPYKR+P SWLKI++QDV+E ICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSGGKGISSSALPYKRTPASWLKISTQDVDETICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120
           AQVK+VTG+KILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKAVTGNKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


>Medtr4g102170.1 | cytoplasmic ribosomal protein S13 | HC |
           chr4:42351426-42353751 | 20130731
          Length = 151

 Score =  291 bits (746), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 143/151 (94%), Positives = 146/151 (96%)

Query: 1   MGRMHSGGKGISSSALPYKRSPPSWLKIASQDVEENICKFAKKGLTPSQIGVILRDSHGI 60
           MGRMHSGGKGISSSALPYKRS P WLK ++QDVEE ICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSGGKGISSSALPYKRSAPGWLKTSTQDVEETICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120
           AQVK +TGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKFITGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


>Medtr5g011910.1 | cytoplasmic ribosomal protein S13 | HC |
           chr5:3503874-3506852 | 20130731
          Length = 151

 Score =  288 bits (737), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 143/151 (94%), Positives = 147/151 (97%)

Query: 1   MGRMHSGGKGISSSALPYKRSPPSWLKIASQDVEENICKFAKKGLTPSQIGVILRDSHGI 60
           MGRMHS GKGISSSALPYKR+ PSWLKI+S +V+E ICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSKGKGISSSALPYKRTSPSWLKISSPEVDETICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120
           AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


>Medtr4g024265.1 | cytoplasmic ribosomal protein S13 | LC |
           chr4:8262741-8268061 | 20130731
          Length = 397

 Score =  221 bits (562), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 105/113 (92%), Positives = 111/113 (98%)

Query: 1   MGRMHSGGKGISSSALPYKRSPPSWLKIASQDVEENICKFAKKGLTPSQIGVILRDSHGI 60
           MGRMHSGGKGISSSALPYKR+P SWLKI++QDV+E ICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSGGKGISSSALPYKRTPASWLKISTQDVDETICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKF 113
           AQVK+VTG+KILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKF
Sbjct: 61  AQVKAVTGNKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKF 113