Miyakogusa Predicted Gene

Lj3g3v2735180.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2735180.1 tr|B9GPF7|B9GPF7_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_755168 PE=4
SV=1,47.83,0.00000000000004,seg,NULL; DUF1442,Protein of unknown
function DUF1442; no description,NULL,CUFF.44533.1
         (198 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g023950.1 | DUF1442 family protein | HC | chr4:8171319-817...   222   2e-58
Medtr1g076800.1 | DUF1442 family protein | HC | chr1:34282105-34...   100   1e-21
Medtr6g060440.1 | DUF1442 family protein | HC | chr6:20762736-20...    94   1e-19
Medtr6g060390.1 | DUF1442 family protein | HC | chr6:20750761-20...    92   3e-19

>Medtr4g023950.1 | DUF1442 family protein | HC |
           chr4:8171319-8172599 | 20130731
          Length = 219

 Score =  222 bits (566), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 106/180 (58%), Positives = 126/180 (70%)

Query: 19  NAQLRGCANXXXXXXXXXXXXXXXXXXXXXXXCVCCGENELQASKKALGVHRHGLEFVVG 78
           NAQL   A+                        +  G+NELQASK+ALGVH+  +EFVVG
Sbjct: 40  NAQLMVVASANVASSTTLALAAASQQTHGRVIYISSGQNELQASKEALGVHKDSVEFVVG 99

Query: 79  DAKCLLLGDYKGADCVLVDCDITSAKEVFVAALKGANKDGAIVVGYNIRHRASRWRQLKA 138
           DAK LLL DYKGAD VLVDCD+ +A+EVF+AA KGANKDGA+VVGYN+RHRA RWRQ +A
Sbjct: 100 DAKTLLLNDYKGADFVLVDCDMNNAREVFLAAFKGANKDGALVVGYNVRHRALRWRQFRA 159

Query: 139 SFLPIGEGLLVTKIXXXXXXXXXXXXQKRRSRWIVQVDHCTGEEHIFRVTSPQKKVQIEV 198
           ++LPIGEGLLVTKI            Q+ +S WIVQVD+CTGEEHIFRVTSP KK+ +EV
Sbjct: 160 TYLPIGEGLLVTKIDLNVKKDYDMVVQRNKSNWIVQVDNCTGEEHIFRVTSPNKKIHVEV 219


>Medtr1g076800.1 | DUF1442 family protein | HC |
           chr1:34282105-34283311 | 20130731
          Length = 222

 Score =  100 bits (248), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 60/151 (39%), Positives = 82/151 (54%), Gaps = 10/151 (6%)

Query: 51  CVCCGENELQASKKALGVHRHGLEFVVGDAK-CLLLGDYKGADCVLVDCDITSAKEVFVA 109
           C+     +L ASK  LG+  H ++F+VG A+  L+L  Y+ AD +L+DC+I + +E+   
Sbjct: 72  CIVPNHKDLIASKHVLGIASHQVQFMVGKAQEVLMLDQYEAADFLLIDCNIKNHEEILKT 131

Query: 110 ALKGANKDGAIVVGYNIRHRASRWRQL--KASFLPIGEGLLVTKIXXXXXXX----XXXX 163
             +G N +   VVGYN       W     K   LPIGEGLLVT+                
Sbjct: 132 IQEGRNVN---VVGYNGFSCKGSWLSCGSKTQLLPIGEGLLVTRFGISENNSPRYGTSRS 188

Query: 164 XQKRRSRWIVQVDHCTGEEHIFRVTSPQKKV 194
             K +SRW+V+VD CTGEEH+FRV  P  KV
Sbjct: 189 MGKIKSRWVVKVDKCTGEEHVFRVRFPHGKV 219


>Medtr6g060440.1 | DUF1442 family protein | HC |
           chr6:20762736-20761390 | 20130731
          Length = 221

 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/150 (38%), Positives = 77/150 (51%), Gaps = 9/150 (6%)

Query: 51  CVCCGENELQASKKALGVHRHGLEFVVGDAKCLLLGDYKGADCVLVDCDITSAKEVFVAA 110
           C+     +L  SKK LG   + ++F++G    L+L     AD VL+DC+  + +E+    
Sbjct: 72  CIVPTNEDLITSKKILGAASNQVQFMIGKEALLVLNK---ADFVLIDCNHMNHEEIVKCV 128

Query: 111 LKGANKD-GAIVVGYNIRHRASRWRQL--KASFLPIGEGLLVTKIXXXXXXX---XXXXX 164
             G  K  G +VVGYN       WR    K   LPIG+GLLVT+                
Sbjct: 129 QIGCCKQKGTVVVGYNAFSSKGSWRSCGSKTQLLPIGQGLLVTRFGENNAISPKFESGMS 188

Query: 165 QKRRSRWIVQVDHCTGEEHIFRVTSPQKKV 194
              RSRWIV+VD CTGEEH++RV  PQ KV
Sbjct: 189 NSPRSRWIVKVDKCTGEEHVYRVRLPQGKV 218


>Medtr6g060390.1 | DUF1442 family protein | HC |
           chr6:20750761-20749382 | 20130731
          Length = 223

 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 59/150 (39%), Positives = 78/150 (52%), Gaps = 7/150 (4%)

Query: 51  CVCCGENELQASKKALGVHRHGLEFVVGDAKCLLLGDYKGADCVLVDCDITSAKEVFVAA 110
           C+     +L  SKK LG   + ++F++G     LL   K AD VL+DC++ + +E+    
Sbjct: 72  CIVPTIEDLITSKKILGAASNQVQFMIGKGAQELLVLNK-ADFVLIDCNLINHEEIVKCV 130

Query: 111 LKGANKD-GAIVVGYNIRHRASRWRQL--KASFLPIGEGLLVTKIXXXXXXX---XXXXX 164
             G  K  G +VVGYN       WR    K   LPIG+GLLVT+                
Sbjct: 131 QIGCCKQKGTVVVGYNAFSSKGSWRSCGSKTQLLPIGQGLLVTRFGENNAISPKFESGIS 190

Query: 165 QKRRSRWIVQVDHCTGEEHIFRVTSPQKKV 194
              RSRWIV+VD CTGEEH++RV  PQ KV
Sbjct: 191 NSPRSRWIVKVDKCTGEEHVYRVRLPQGKV 220