Miyakogusa Predicted Gene

Lj3g3v2735140.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2735140.2 Non Characterized Hit- tr|K3YFL4|K3YFL4_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si013032,67.21,2e-18,Sec1,Sec1-like protein; seg,NULL; PLANT
SEC1,NULL; VESICLE PROTEIN SORTING-ASSOCIATED,Sec1-like
prot,CUFF.44531.2
         (146 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g023610.1 | Sec1-family transporter | HC | chr4:8008899-80...   215   1e-56
Medtr4g102120.1 | SNARE-interacting KEULE-like protein | HC | ch...   174   2e-44
Medtr5g011790.1 | SNARE-interacting KEULE-like protein | HC | ch...   160   3e-40
Medtr5g011790.3 | SNARE-interacting KEULE-like protein | HC | ch...   160   3e-40
Medtr5g011790.2 | SNARE-interacting KEULE-like protein | HC | ch...   160   4e-40
Medtr4g120070.1 | RNA helicase, putative | HC | chr4:49772806-49...   141   2e-34

>Medtr4g023610.1 | Sec1-family transporter | HC |
           chr4:8008899-8000116 | 20130731
          Length = 660

 Score =  215 bits (547), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 110/148 (74%), Positives = 118/148 (79%), Gaps = 2/148 (1%)

Query: 1   MVQALPQYTEQVEKISLHVEVAGKINKIIRDTDLRELGQLEQDLVFGDAGAKEVIMFLRT 60
           MVQALPQYTEQVEKISLHVE+AGKIN IIR+ DLRELGQLEQDLVFGDA AK+VI FLRT
Sbjct: 365 MVQALPQYTEQVEKISLHVEIAGKINTIIRENDLRELGQLEQDLVFGDAAAKDVINFLRT 424

Query: 61  KQNTTPEYKLRLLMIYASVYPEKFEGDKATKLMQLAKLSPDDMKVISNMQLLGGPXXXXX 120
           KQ  +PEYKLRLLMIYA+VYPEKFEGDK  KLMQLAKLSPDDMKV+SNMQ+L G      
Sbjct: 425 KQKMSPEYKLRLLMIYATVYPEKFEGDKGVKLMQLAKLSPDDMKVVSNMQMLAGATKKKA 484

Query: 121 XXXXX--XXXXXXQKTKQGARKDRTEEE 146
                        QKT Q ARKDRT+EE
Sbjct: 485 AAATGDFSLKFSNQKTSQAARKDRTDEE 512


>Medtr4g102120.1 | SNARE-interacting KEULE-like protein | HC |
           chr4:42294471-42279475 | 20130731
          Length = 666

 Score =  174 bits (442), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 87/147 (59%), Positives = 110/147 (74%), Gaps = 1/147 (0%)

Query: 1   MVQALPQYTEQVEKISLHVEVAGKINKIIRDTDLRELGQLEQDLVFGDAGAKEVIMFLRT 60
           MVQALPQY+EQ++K+SLHVE+AGK+N IIR+T LRELGQLEQDLVFGDAG K+VI FL T
Sbjct: 366 MVQALPQYSEQIDKLSLHVEIAGKVNSIIRETGLRELGQLEQDLVFGDAGMKDVIKFLTT 425

Query: 61  KQNTTPEYKLRLLMIYASVYPEKFEGDKATKLMQLAKLSPDDMKVISNMQLLGG-PXXXX 119
           K++T+ E KLRLLMI A++YPEKFEG+K   LM++AKL+ DD   I+N+++LGG P    
Sbjct: 426 KEDTSRENKLRLLMILAAIYPEKFEGEKGLNLMKVAKLTNDDAIAINNLRVLGGEPDAKK 485

Query: 120 XXXXXXXXXXXXQKTKQGARKDRTEEE 146
                        K K+  RK+R EEE
Sbjct: 486 TSTSGFGLKFDMHKKKRAVRKNRAEEE 512


>Medtr5g011790.1 | SNARE-interacting KEULE-like protein | HC |
           chr5:3449752-3441379 | 20130731
          Length = 669

 Score =  160 bits (406), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 74/114 (64%), Positives = 99/114 (86%)

Query: 1   MVQALPQYTEQVEKISLHVEVAGKINKIIRDTDLRELGQLEQDLVFGDAGAKEVIMFLRT 60
           MVQALPQY+EQ++K+SLHVE+AGKIN IIR++ LRELGQ+EQDLVFGDA  K+VI FL  
Sbjct: 364 MVQALPQYSEQIDKLSLHVELAGKINSIIRESGLRELGQVEQDLVFGDATMKDVIKFLTM 423

Query: 61  KQNTTPEYKLRLLMIYASVYPEKFEGDKATKLMQLAKLSPDDMKVISNMQLLGG 114
           K++TT E KLRLLMI A+VYPEKF+G+K   LM++A+L+ +DM +++N+++LGG
Sbjct: 424 KEDTTRENKLRLLMILAAVYPEKFDGEKGLNLMKVARLTDEDMTIVNNLRMLGG 477


>Medtr5g011790.3 | SNARE-interacting KEULE-like protein | HC |
           chr5:3449023-3441410 | 20130731
          Length = 620

 Score =  160 bits (406), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 74/114 (64%), Positives = 99/114 (86%)

Query: 1   MVQALPQYTEQVEKISLHVEVAGKINKIIRDTDLRELGQLEQDLVFGDAGAKEVIMFLRT 60
           MVQALPQY+EQ++K+SLHVE+AGKIN IIR++ LRELGQ+EQDLVFGDA  K+VI FL  
Sbjct: 315 MVQALPQYSEQIDKLSLHVELAGKINSIIRESGLRELGQVEQDLVFGDATMKDVIKFLTM 374

Query: 61  KQNTTPEYKLRLLMIYASVYPEKFEGDKATKLMQLAKLSPDDMKVISNMQLLGG 114
           K++TT E KLRLLMI A+VYPEKF+G+K   LM++A+L+ +DM +++N+++LGG
Sbjct: 375 KEDTTRENKLRLLMILAAVYPEKFDGEKGLNLMKVARLTDEDMTIVNNLRMLGG 428


>Medtr5g011790.2 | SNARE-interacting KEULE-like protein | HC |
           chr5:3449752-3441379 | 20130731
          Length = 592

 Score =  160 bits (405), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 74/114 (64%), Positives = 99/114 (86%)

Query: 1   MVQALPQYTEQVEKISLHVEVAGKINKIIRDTDLRELGQLEQDLVFGDAGAKEVIMFLRT 60
           MVQALPQY+EQ++K+SLHVE+AGKIN IIR++ LRELGQ+EQDLVFGDA  K+VI FL  
Sbjct: 364 MVQALPQYSEQIDKLSLHVELAGKINSIIRESGLRELGQVEQDLVFGDATMKDVIKFLTM 423

Query: 61  KQNTTPEYKLRLLMIYASVYPEKFEGDKATKLMQLAKLSPDDMKVISNMQLLGG 114
           K++TT E KLRLLMI A+VYPEKF+G+K   LM++A+L+ +DM +++N+++LGG
Sbjct: 424 KEDTTRENKLRLLMILAAVYPEKFDGEKGLNLMKVARLTDEDMTIVNNLRMLGG 477


>Medtr4g120070.1 | RNA helicase, putative | HC |
           chr4:49772806-49778936 | 20130731
          Length = 1256

 Score =  141 bits (356), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 70/99 (70%), Positives = 76/99 (76%), Gaps = 9/99 (9%)

Query: 1   MVQALPQYTEQVEKISLHVEVAGKINKIIRDTDLRELGQLEQDLVFGDAGAKEVIMFLRT 60
             +A PQYTEQVEKISLHVE+A KIN IIR+ DLRELGQLEQDLVFGDA AK+       
Sbjct: 130 WFKAFPQYTEQVEKISLHVEIAVKINTIIRENDLRELGQLEQDLVFGDAAAKD------- 182

Query: 61  KQNTTPEYKLRLLMIYASVYPEKFEGDKATKLMQLAKLS 99
             N +PEYKLRLLMIYA+VYPEKFEGDK  KLMQ    S
Sbjct: 183 --NMSPEYKLRLLMIYATVYPEKFEGDKGVKLMQFHAHS 219