Miyakogusa Predicted Gene

Lj3g3v2735000.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2735000.1 Non Characterized Hit- tr|F6I372|F6I372_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,75.92,0,seg,NULL,CUFF.44519.1
         (625 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g036115.1 | hypothetical protein | HC | chr8:13301078-1329...   953   0.0  

>Medtr8g036115.1 | hypothetical protein | HC |
           chr8:13301078-13298484 | 20130731
          Length = 637

 Score =  953 bits (2464), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 488/641 (76%), Positives = 531/641 (82%), Gaps = 24/641 (3%)

Query: 2   SKLEQDEDLFLPDLTVPVAPD----PPHHILPTTSDTT------SFSLPEIVLFXXXXXX 51
           SK E++ED    +L +PV PD    PPH ILP+T+ T       SFSL EIVLF      
Sbjct: 4   SKREEEEDDL--NLFLPVPPDLSIHPPHQILPSTTTTQPPSEPPSFSLSEIVLFPSPSPS 61

Query: 52  XXXXXXXXXXXXXXXXX-XXKPFFISPDPHISTQFYTFNPDSHALMITCLLERRLATPSE 110
                               KPFFISPDPHIS+QFYTFN DSH+LMI CLL+ RLATP+E
Sbjct: 62  SSPHSHSSGDSPPQTTAPTLKPFFISPDPHISSQFYTFNRDSHSLMINCLLQNRLATPAE 121

Query: 111 IRAATPRPVLKSWRNVWKDRNEETAYLTAWKRIQDKLEARVDQNGNHFLCFKNNTNQFVS 170
           IR ATP PVLKSWR VWKDRNEETAYLTAWKRIQDKL ARVDQNGN FLCFKNNTNQFVS
Sbjct: 122 IRDATPSPVLKSWRTVWKDRNEETAYLTAWKRIQDKLTARVDQNGNQFLCFKNNTNQFVS 181

Query: 171 HVNQWQDIVMSFHSDTDLKHLGLRETVERIKQVWTVGAKFYGIPESYIRXXXXXXXX-XX 229
           HVNQWQDIVM+FHSD DLKHLG+++TVERIKQVWTVGAKFYGIPESY+R           
Sbjct: 182 HVNQWQDIVMNFHSDADLKHLGVKDTVERIKQVWTVGAKFYGIPESYVRVCIAACPVCSA 241

Query: 230 XXXXXXXXXXXXXXXXKRRRFEYTESFDVPAKEVPCRLQQLAAKHKVVLCIRQKYIRYKP 289
                           KRRRFEYTESFDVPAKEVP +LQQLAAKHKVVLCIRQKYIRYKP
Sbjct: 242 AESGSSMSDAAAAARNKRRRFEYTESFDVPAKEVPSKLQQLAAKHKVVLCIRQKYIRYKP 301

Query: 290 FMAEVKDYACHRAGQPAA-KKSKVLKREPYASKRCGCGFRIRAIVPIANYNEKDKSFVYQ 348
           FMAEVKDYACHRAGQPAA KK+K+LKREPYASKRCGCGFRIRAIVPIANYNEKDKSFVY+
Sbjct: 302 FMAEVKDYACHRAGQPAANKKAKILKREPYASKRCGCGFRIRAIVPIANYNEKDKSFVYE 361

Query: 349 EEGMAVFKLYAVHSGHEPGPLDGNARIMHRVVGHKGSYMTDQENVVYGVSEEMDNEGFGL 408
           EEG AVFKLYAVHSGHEPGPLDGNARIMHRVVGHKG Y+ DQ+ VVYGVSEEM+NEGFGL
Sbjct: 362 EEGTAVFKLYAVHSGHEPGPLDGNARIMHRVVGHKGGYLMDQDAVVYGVSEEMENEGFGL 421

Query: 409 MGKDEGDLQFSILQQVQELKAEVGMLEGKLSKIPQEFMGSVSRELFDIVNKIRNIGEVGS 468
           MGKD+GDLQFS+LQQVQEL+AEVGMLEG++SKIPQE +GSVSR+LFD+VN+IR+IGEVG 
Sbjct: 422 MGKDDGDLQFSVLQQVQELRAEVGMLEGRVSKIPQELLGSVSRDLFDVVNRIRSIGEVGL 481

Query: 469 KPIELL-TDK--SDDVLVGDNDLANWSN-HHDRIYGDGKDTELIEDDEDSFGRTLGEVVS 524
           KP+ L  TDK  SDDVLVGDNDLANWSN HH+RIYGDGK+TELIEDDEDSFGRTLGEVVS
Sbjct: 482 KPMGLHPTDKSHSDDVLVGDNDLANWSNHHHERIYGDGKETELIEDDEDSFGRTLGEVVS 541

Query: 525 WGDHMTSECRDQKELMSETCKPEKWLKCSEFDEKSILDCGEDTKLTKPIRHDEAIVSDEG 584
           WGDH+ +ECR QK+L+SETCKPEKWLKC +FD KSILDC EDTKLTKPIRH+EAIVSD G
Sbjct: 542 WGDHIRTECRSQKDLISETCKPEKWLKC-DFDHKSILDC-EDTKLTKPIRHNEAIVSDVG 599

Query: 585 LGCIQVDSFYQDNPKWYDSPCALDTGVADCENSGFRHGEIL 625
           LGC  VDSFYQDN KWYDSPCAL T  ADCE++GF HGEIL
Sbjct: 600 LGC--VDSFYQDNSKWYDSPCALGTS-ADCEDTGFHHGEIL 637