Miyakogusa Predicted Gene

Lj3g3v2721430.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2721430.1 Non Characterized Hit- tr|I1I7S4|I1I7S4_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,59.84,1e-18,coiled-coil,NULL; seg,NULL; Lzipper-MIP1,Ternary
complex factor MIP1, leucine-zipper,CUFF.44493.1
         (259 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g079840.2 | transcription factor | HC | chr8:34262684-3425...   172   2e-43
Medtr8g079840.1 | transcription factor | HC | chr8:34262684-3425...   172   4e-43
Medtr5g017790.3 | transcription factor | HC | chr5:6564085-65684...   171   6e-43
Medtr5g017790.1 | transcription factor | HC | chr5:6564085-65685...   171   7e-43
Medtr5g017790.2 | transcription factor | HC | chr5:6564085-65684...   168   4e-42
Medtr3g101340.3 | transcription factor | HC | chr3:46642312-4663...    52   7e-07
Medtr3g101340.1 | transcription factor | HC | chr3:46641969-4663...    52   8e-07
Medtr3g101340.2 | transcription factor | HC | chr3:46642276-4663...    51   8e-07

>Medtr8g079840.2 | transcription factor | HC |
           chr8:34262684-34258597 | 20130731
          Length = 503

 Score =  172 bits (437), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/231 (48%), Positives = 132/231 (57%), Gaps = 14/231 (6%)

Query: 31  SNRERKMALIQEIDKLKRKLRHEENVHRVLERXXXXXXXXXXXXXXXXXXXXXXXXXXXX 90
           SNRE+K+AL+Q++DKLKRKLRHEENVHR LER                            
Sbjct: 30  SNREKKIALLQDVDKLKRKLRHEENVHRALERAFTRPLGSLPRLPPYLPPYTLELLAEVA 89

Query: 91  XXXXXXXXXXXXXXNFRQGLCQKAFYISSKSNAE---DPMDQNSIRS-TKHQRSKSLSQS 146
                         NFRQGL Q+A YISSK NAE   DP+DQN +RS +KHQRSKS SQS
Sbjct: 90  VLEEEVVRLEEQVVNFRQGLYQEAVYISSKRNAENLNDPIDQNHMRSNSKHQRSKSYSQS 149

Query: 147 EFNSTI--------IARXXXXXXXXXX-DILTGKLVKE-KQMHTKQDSLSSIPEGRWGKE 196
           EFNS          +AR           D +T       KQ+H KQDS SSI E   GKE
Sbjct: 150 EFNSMTTRLPPQNSLARSASSRKLLFSPDTVTNHGGSNGKQLHRKQDSFSSIQEEGRGKE 209

Query: 197 NPLFCNSLKDKQSPEKERAKVISSIKKSPTKQEPADKCVDHLKLQLEWKIS 247
           N LF N LKDKQSP K+ +K+I+ +KKSP K E A K +D LKLQLEW++S
Sbjct: 210 NLLFSNFLKDKQSPVKKISKLITPLKKSPLKHESAHKSMDQLKLQLEWRLS 260


>Medtr8g079840.1 | transcription factor | HC |
           chr8:34262684-34257297 | 20130731
          Length = 597

 Score =  172 bits (435), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 112/231 (48%), Positives = 132/231 (57%), Gaps = 14/231 (6%)

Query: 31  SNRERKMALIQEIDKLKRKLRHEENVHRVLERXXXXXXXXXXXXXXXXXXXXXXXXXXXX 90
           SNRE+K+AL+Q++DKLKRKLRHEENVHR LER                            
Sbjct: 30  SNREKKIALLQDVDKLKRKLRHEENVHRALERAFTRPLGSLPRLPPYLPPYTLELLAEVA 89

Query: 91  XXXXXXXXXXXXXXNFRQGLCQKAFYISSKSNAE---DPMDQNSIRS-TKHQRSKSLSQS 146
                         NFRQGL Q+A YISSK NAE   DP+DQN +RS +KHQRSKS SQS
Sbjct: 90  VLEEEVVRLEEQVVNFRQGLYQEAVYISSKRNAENLNDPIDQNHMRSNSKHQRSKSYSQS 149

Query: 147 EFNSTI--------IARXXXXXXXXXX-DILTGKLVKE-KQMHTKQDSLSSIPEGRWGKE 196
           EFNS          +AR           D +T       KQ+H KQDS SSI E   GKE
Sbjct: 150 EFNSMTTRLPPQNSLARSASSRKLLFSPDTVTNHGGSNGKQLHRKQDSFSSIQEEGRGKE 209

Query: 197 NPLFCNSLKDKQSPEKERAKVISSIKKSPTKQEPADKCVDHLKLQLEWKIS 247
           N LF N LKDKQSP K+ +K+I+ +KKSP K E A K +D LKLQLEW++S
Sbjct: 210 NLLFSNFLKDKQSPVKKISKLITPLKKSPLKHESAHKSMDQLKLQLEWRLS 260


>Medtr5g017790.3 | transcription factor | HC | chr5:6564085-6568478
           | 20130731
          Length = 424

 Score =  171 bits (433), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 114/249 (45%), Positives = 135/249 (54%), Gaps = 24/249 (9%)

Query: 1   MYTRAHTSLQDXXXXXXXXXXXXSQRNRCLSNRERKMALIQEIDKLKRKLRHEENVHRVL 60
           M +R HT+LQD            +        RERKMALIQ++DKLKRKLRHEENVHRVL
Sbjct: 1   MSSREHTTLQDKMEKGGSRKMA-AHNTLKKGRRERKMALIQDVDKLKRKLRHEENVHRVL 59

Query: 61  ERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFRQGLCQKAFYISSK 120
           ER                                          NFRQGL Q+A YISSK
Sbjct: 60  ERALTRPLGALPRLPPYLPSHTLELVAEVAVLEEEVVRLEEKVVNFRQGLYQEAVYISSK 119

Query: 121 SNAEDPMD---QNSIRSTKHQRSKSLSQSEFNSTIIARXXXXXXXXXXDILTGKLVKEKQ 177
            NAE+ +D   QNSI+ +KHQRSKSLSQSE NST                 + KLV  KQ
Sbjct: 120 RNAENSIDSIEQNSIKGSKHQRSKSLSQSELNSTTTRPQISLAISAS----SRKLVNGKQ 175

Query: 178 MHTKQDSLSSIPEGRWGKENPLFCNSLKDKQSPEKERAKVISSIKKSPTKQEPADKCVDH 237
           +H+KQDSLSSIPE                ++S EK+ AKVI+ +KKSPTKQE ADKCVDH
Sbjct: 176 LHSKQDSLSSIPE----------------EKSIEKKMAKVITPVKKSPTKQESADKCVDH 219

Query: 238 LKLQLEWKI 246
           +KLQLE ++
Sbjct: 220 VKLQLEKRL 228


>Medtr5g017790.1 | transcription factor | HC | chr5:6564085-6568525
           | 20130731
          Length = 546

 Score =  171 bits (433), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 114/246 (46%), Positives = 133/246 (54%), Gaps = 24/246 (9%)

Query: 1   MYTRAHTSLQDXXXXXXXXXXXXSQRNRCLSNRERKMALIQEIDKLKRKLRHEENVHRVL 60
           M +R HT+LQD                +    RERKMALIQ++DKLKRKLRHEENVHRVL
Sbjct: 1   MSSREHTTLQDKMEKGGSRKMAAHNTLK-KGRRERKMALIQDVDKLKRKLRHEENVHRVL 59

Query: 61  ERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFRQGLCQKAFYISSK 120
           ER                                          NFRQGL Q+A YISSK
Sbjct: 60  ERALTRPLGALPRLPPYLPSHTLELVAEVAVLEEEVVRLEEKVVNFRQGLYQEAVYISSK 119

Query: 121 SNAEDPMD---QNSIRSTKHQRSKSLSQSEFNSTIIARXXXXXXXXXXDILTGKLVKEKQ 177
            NAE+ +D   QNSI+ +KHQRSKSLSQSE NST                 + KLV  KQ
Sbjct: 120 RNAENSIDSIEQNSIKGSKHQRSKSLSQSELNSTTTRPQISLAISAS----SRKLVNGKQ 175

Query: 178 MHTKQDSLSSIPEGRWGKENPLFCNSLKDKQSPEKERAKVISSIKKSPTKQEPADKCVDH 237
           +H+KQDSLSSIPE                ++S EK+ AKVI+ +KKSPTKQE ADKCVDH
Sbjct: 176 LHSKQDSLSSIPE----------------EKSIEKKMAKVITPVKKSPTKQESADKCVDH 219

Query: 238 LKLQLE 243
           +KLQLE
Sbjct: 220 VKLQLE 225


>Medtr5g017790.2 | transcription factor | HC | chr5:6564085-6568478
           | 20130731
          Length = 534

 Score =  168 bits (426), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 107/214 (50%), Positives = 123/214 (57%), Gaps = 23/214 (10%)

Query: 33  RERKMALIQEIDKLKRKLRHEENVHRVLERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 92
           RERKMALIQ++DKLKRKLRHEENVHRVLER                              
Sbjct: 20  RERKMALIQDVDKLKRKLRHEENVHRVLERALTRPLGALPRLPPYLPSHTLELVAEVAVL 79

Query: 93  XXXXXXXXXXXXNFRQGLCQKAFYISSKSNAE---DPMDQNSIRSTKHQRSKSLSQSEFN 149
                       NFRQGL Q+A YISSK NAE   D ++QNSI+ +KHQRSKSLSQSE N
Sbjct: 80  EEEVVRLEEKVVNFRQGLYQEAVYISSKRNAENSIDSIEQNSIKGSKHQRSKSLSQSELN 139

Query: 150 STIIARXXXXXXXXXXDILTGKLVKEKQMHTKQDSLSSIPEGRWGKENPLFCNSLKDKQS 209
           ST                 + KLV  KQ+H+KQDSLSSIPE                ++S
Sbjct: 140 STTTRPQISLAISAS----SRKLVNGKQLHSKQDSLSSIPE----------------EKS 179

Query: 210 PEKERAKVISSIKKSPTKQEPADKCVDHLKLQLE 243
            EK+ AKVI+ +KKSPTKQE ADKCVDH+KLQLE
Sbjct: 180 IEKKMAKVITPVKKSPTKQESADKCVDHVKLQLE 213


>Medtr3g101340.3 | transcription factor | HC |
           chr3:46642312-46638453 | 20130731
          Length = 565

 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 53/121 (43%)

Query: 31  SNRERKMALIQEIDKLKRKLRHEENVHRVLERXXXXXXXXXXXXXXXXXXXXXXXXXXXX 90
           S+++RK+AL Q++D+LK+KLRHEEN+H+ LER                            
Sbjct: 55  SSKDRKLALQQDVDRLKKKLRHEENIHKALERALNRPLGALPRLPPYLPPYTLGLVAEVA 114

Query: 91  XXXXXXXXXXXXXXNFRQGLCQKAFYISSKSNAEDPMDQNSIRSTKHQRSKSLSQSEFNS 150
                         +FRQ L Q+A Y+SS     + ++  S+ +     S  L  +   S
Sbjct: 115 VLEEEIVRLEEKVLHFRQDLHQEAVYMSSSKMKLEHLEAASVNNANPNDSTKLDHTATFS 174

Query: 151 T 151
           T
Sbjct: 175 T 175


>Medtr3g101340.1 | transcription factor | HC |
           chr3:46641969-46638553 | 20130731
          Length = 539

 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 53/121 (43%)

Query: 31  SNRERKMALIQEIDKLKRKLRHEENVHRVLERXXXXXXXXXXXXXXXXXXXXXXXXXXXX 90
           S+++RK+AL Q++D+LK+KLRHEEN+H+ LER                            
Sbjct: 30  SSKDRKLALQQDVDRLKKKLRHEENIHKALERALNRPLGALPRLPPYLPPYTLGLVAEVA 89

Query: 91  XXXXXXXXXXXXXXNFRQGLCQKAFYISSKSNAEDPMDQNSIRSTKHQRSKSLSQSEFNS 150
                         +FRQ L Q+A Y+SS     + ++  S+ +     S  L  +   S
Sbjct: 90  VLEEEIVRLEEKVLHFRQDLHQEAVYMSSSKMKLEHLEAASVNNANPNDSTKLDHTATFS 149

Query: 151 T 151
           T
Sbjct: 150 T 150


>Medtr3g101340.2 | transcription factor | HC |
           chr3:46642276-46638509 | 20130731
          Length = 572

 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 53/121 (43%)

Query: 31  SNRERKMALIQEIDKLKRKLRHEENVHRVLERXXXXXXXXXXXXXXXXXXXXXXXXXXXX 90
           S+++RK+AL Q++D+LK+KLRHEEN+H+ LER                            
Sbjct: 55  SSKDRKLALQQDVDRLKKKLRHEENIHKALERALNRPLGALPRLPPYLPPYTLGLVAEVA 114

Query: 91  XXXXXXXXXXXXXXNFRQGLCQKAFYISSKSNAEDPMDQNSIRSTKHQRSKSLSQSEFNS 150
                         +FRQ L Q+A Y+SS     + ++  S+ +     S  L  +   S
Sbjct: 115 VLEEEIVRLEEKVLHFRQDLHQEAVYMSSSKMKLEHLEAASVNNANPNDSTKLDHTATFS 174

Query: 151 T 151
           T
Sbjct: 175 T 175