Miyakogusa Predicted Gene
- Lj3g3v2719910.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2719910.1 Non Characterized Hit- tr|K4BBX2|K4BBX2_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,52.87,1e-17,seg,NULL; SUBFAMILY NOT NAMED,NULL; NITRATE,
FROMATE, IRON DEHYDROGENASE,NULL; DUF588,Uncharacterise,CUFF.44468.1
(187 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g081880.1 | casparian strip membrane protein | HC | chr4:3... 246 1e-65
Medtr5g041900.1 | casparian strip membrane protein | HC | chr5:1... 206 8e-54
Medtr7g011090.1 | casparian strip membrane protein | HC | chr7:2... 175 2e-44
Medtr1g058560.1 | casparian strip membrane protein | HC | chr1:2... 125 3e-29
Medtr1g058570.1 | casparian strip membrane protein | HC | chr1:2... 120 1e-27
Medtr1g058540.1 | casparian strip membrane protein | HC | chr1:2... 116 1e-26
Medtr2g086740.1 | plant integral membrane protein | HC | chr2:36... 111 4e-25
Medtr2g086740.2 | plant integral membrane protein | HC | chr2:36... 74 8e-14
Medtr0004s0210.1 | CASP POPTRDRAFT-like protein | HC | scaffold0... 66 2e-11
Medtr5g076480.1 | CASP POPTRDRAFT-like protein | HC | chr5:32632... 57 1e-08
Medtr7g108130.1 | plant integral membrane protein | HC | chr7:43... 56 2e-08
Medtr4g118800.1 | plant integral membrane protein | HC | chr4:49... 52 4e-07
Medtr0097s0070.1 | CASP POPTRDRAFT-like protein | HC | scaffold0... 52 5e-07
Medtr8g089300.1 | CASP POPTRDRAFT-like protein | HC | chr8:37100... 51 8e-07
Medtr3g064310.1 | CASP POPTRDRAFT-like protein | HC | chr3:28945... 48 4e-06
Medtr7g083120.1 | plant integral membrane protein | HC | chr7:31... 47 7e-06
>Medtr4g081880.1 | casparian strip membrane protein | HC |
chr4:31869526-31871135 | 20130731
Length = 189
Score = 246 bits (627), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 124/187 (66%), Positives = 143/187 (76%), Gaps = 2/187 (1%)
Query: 1 MKVSAVETGEISQ-VSAPRKGMIRGLSIMDFILRIVAAIXXXXXXXXXXXXRETLPFTTQ 59
MKVS +E+GEIS+ S+PRKGM RGLSIMDFILRI AA+ ++T+PF T+
Sbjct: 1 MKVSTIESGEISKGASSPRKGMKRGLSIMDFILRIFAAMSTLGSALSMGTAKQTMPFATR 60
Query: 60 FVKFRAVFDDLPTFVFFVTSNSIVCGYLVLSLALSFFHIIRRSSAAKSRILLVFLDTVMF 119
FV+F+ F DLPTF+FFVT+NSIVCGYL LSL LSFFHI+R S KSRILLVFLDTVMF
Sbjct: 61 FVRFKVSFHDLPTFLFFVTANSIVCGYLALSLVLSFFHIVRTISV-KSRILLVFLDTVMF 119
Query: 120 XXXXXXXXXXXXIVYVSHYGNVNANWFPFCGQYNHFCERISGSLIGSFIAVVIFMIIILM 179
IVYV+HYGN +ANWFPFC QYN FC RISGSL+GSFIAVVIFMI+ILM
Sbjct: 120 GLLTSGASAAAAIVYVAHYGNPSANWFPFCQQYNSFCGRISGSLVGSFIAVVIFMILILM 179
Query: 180 SAVSISK 186
S +SISK
Sbjct: 180 SGISISK 186
>Medtr5g041900.1 | casparian strip membrane protein | HC |
chr5:18399261-18401571 | 20130731
Length = 186
Score = 206 bits (525), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 107/187 (57%), Positives = 132/187 (70%), Gaps = 1/187 (0%)
Query: 1 MKVSAVETGEISQVSAPRKGMIRGLSIMDFILRIVAAIXXXXXXXXXXXXRETLPFTTQF 60
MK ++E GE+S+ ++ KG+ RGLSIMDFILRI+A + E LPF T F
Sbjct: 1 MKGGSIELGEVSKNASTNKGVKRGLSIMDFILRIIAGVATLASAVAMGTTDERLPFATSF 60
Query: 61 VKFRAVFDDLPTFVFFVTSNSIVCGYLVLSLALSFFHIIRRSSAAKSRILLVFLDTVMFX 120
V+FRA +DDLP+FVFFV +NSIVCGYL LSL LS HI+ RS+A KSRILL+ LD VM
Sbjct: 61 VQFRAEYDDLPSFVFFVLANSIVCGYLALSLILSILHIV-RSTAVKSRILLIVLDMVMMG 119
Query: 121 XXXXXXXXXXXIVYVSHYGNVNANWFPFCGQYNHFCERISGSLIGSFIAVVIFMIIILMS 180
IVY++HYGN ANWFP C QYN FCERISGSLIGS+IAV +F+IIIL+S
Sbjct: 120 LLAAAASAAASIVYIAHYGNTQANWFPICQQYNSFCERISGSLIGSYIAVALFIIIILLS 179
Query: 181 AVSISKH 187
+IS++
Sbjct: 180 QSAISRN 186
>Medtr7g011090.1 | casparian strip membrane protein | HC |
chr7:2905231-2907425 | 20130731
Length = 186
Score = 175 bits (444), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/186 (51%), Positives = 125/186 (67%), Gaps = 2/186 (1%)
Query: 2 KVSAVETGEISQVSAPRKGMIRGLSIMDFILRIVAAIXXXXXXXXXXXXRETLPFTTQFV 61
K + VE GE + S + M RG+SI+DFILR++A + E+LPF TQFV
Sbjct: 3 KSTYVELGE-EKTSNQKGNMKRGVSILDFILRLIAIVATLASAIAMGTTDESLPFFTQFV 61
Query: 62 KFRAVFDDLPTFVFFVTSNSIVCGYLVLSLALSFFHIIRRSSAAKSRILLVFLDTVMFXX 121
+FRA +DDLPT FFV +++IV GYL+LSL LS HIIR SSA +R++ + LDTVM
Sbjct: 62 RFRANYDDLPTLRFFVVASAIVSGYLILSLPLSILHIIR-SSAGMTRVIFIILDTVMLGL 120
Query: 122 XXXXXXXXXXIVYVSHYGNVNANWFPFCGQYNHFCERISGSLIGSFIAVVIFMIIILMSA 181
IVY++H GN ANWF FC QYN FCERISGSLIGSFIA+ +F+++IL+SA
Sbjct: 121 LTAGSSAAASIVYLAHKGNRKANWFAFCQQYNSFCERISGSLIGSFIAIPLFIMLILLSA 180
Query: 182 VSISKH 187
+ +S+
Sbjct: 181 LVLSRR 186
>Medtr1g058560.1 | casparian strip membrane protein | HC |
chr1:25810191-25808737 | 20130731
Length = 195
Score = 125 bits (313), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 104/181 (57%), Gaps = 3/181 (1%)
Query: 9 GEISQVSAPRK--GMIRGLSIMDFILRIVAAIXXXXXXXXXXXXRETLPFTTQFVKFRAV 66
G+ V+AP + G +G++IMDFILR+ A ++LPF TQF +F A
Sbjct: 16 GKAVLVAAPARPGGWKKGIAIMDFILRLGAIAAALAAAASMGTSDQSLPFFTQFFQFEAS 75
Query: 67 FDDLPTFVFFVTSNSIVCGYLVLSLALSFFHIIRRSSAAKSRILLVFLDTVMFXXXXXXX 126
+D P F FF+ + +IV GYLVLSL S IIR A R+ L+ LDTV
Sbjct: 76 YDSFPAFQFFLIAMAIVAGYLVLSLPFSIVAIIR-PHATGPRLFLIILDTVFLTLATASA 134
Query: 127 XXXXXIVYVSHYGNVNANWFPFCGQYNHFCERISGSLIGSFIAVVIFMIIILMSAVSISK 186
IVY++H GN + NW C Q+ FC + SG+++ SFI VV+ +++++MSA+++ K
Sbjct: 135 ASAASIVYLAHNGNQDTNWLAICNQFGDFCAQTSGAVVASFITVVVLIVLVVMSALALGK 194
Query: 187 H 187
H
Sbjct: 195 H 195
>Medtr1g058570.1 | casparian strip membrane protein | HC |
chr1:25816955-25815748 | 20130731
Length = 194
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 97/174 (55%), Gaps = 3/174 (1%)
Query: 16 APRK--GMIRGLSIMDFILRIVAAIXXXXXXXXXXXXRETLPFTTQFVKFRAVFDDLPTF 73
AP + G +G +IMDFILR+ A +TLPF TQF +F A +D TF
Sbjct: 22 APARPGGWKKGTAIMDFILRLGAIAAAIAAAASMGTSDQTLPFFTQFFQFEASYDSFTTF 81
Query: 74 VFFVTSNSIVCGYLVLSLALSFFHIIRRSSAAKSRILLVFLDTVMFXXXXXXXXXXXXIV 133
FFV S +I YLVLSL S IIR A R+ L+ LDTV IV
Sbjct: 82 QFFVISMAIAASYLVLSLPFSIVAIIR-PHAPGPRLFLIILDTVFLTLATSSAAAAASIV 140
Query: 134 YVSHYGNVNANWFPFCGQYNHFCERISGSLIGSFIAVVIFMIIILMSAVSISKH 187
Y++H GN + NW C Q+ FC + SG+++ SFI VV+ +++++MSA++I KH
Sbjct: 141 YLAHNGNQDTNWLAICNQFGDFCAQTSGAVVASFITVVVLILLVVMSALAIGKH 194
>Medtr1g058540.1 | casparian strip membrane protein | HC |
chr1:25798149-25796910 | 20130731
Length = 196
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 100/176 (56%), Gaps = 3/176 (1%)
Query: 14 VSAPRK--GMIRGLSIMDFILRIVAAIXXXXXXXXXXXXRETLPFTTQFVKFRAVFDDLP 71
+ AP + G +G++IMDF+LR+ A + LPF TQF++F A +D
Sbjct: 22 IGAPARPGGWKKGIAIMDFVLRLGAIAASLAATITMATSDQILPFFTQFLQFEASYDSFS 81
Query: 72 TFVFFVTSNSIVCGYLVLSLALSFFHIIRRSSAAKSRILLVFLDTVMFXXXXXXXXXXXX 131
TF FFV + + V GYLVLSL S IIR A R+ L+ LDTV
Sbjct: 82 TFQFFVIAMAFVGGYLVLSLPFSIVTIIR-PHAPGPRLFLIILDTVFLTLATASGASAAA 140
Query: 132 IVYVSHYGNVNANWFPFCGQYNHFCERISGSLIGSFIAVVIFMIIILMSAVSISKH 187
+V ++H GN ++NW C Q+ FC + SG+++ SFI VV+ M++++MSA+++ KH
Sbjct: 141 MVSLAHNGNQDSNWLAICNQFGDFCAQTSGAVVASFITVVVLMVLVVMSALALGKH 196
>Medtr2g086740.1 | plant integral membrane protein | HC |
chr2:36464677-36466663 | 20130731
Length = 220
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 95/169 (56%), Gaps = 1/169 (0%)
Query: 18 RKGMIRGLSIMDFILRIVAAIXXXXXXXXXXXXRETLPFTTQFVKFRAVFDDLPTFVFFV 77
+ GM +G++I+DFILR+ A + LPF TQF++F A +DD P F FFV
Sbjct: 52 KGGMKKGIAILDFILRLGAIGAALGAAVIMGTNEQILPFFTQFLQFHAQWDDFPMFKFFV 111
Query: 78 TSNSIVCGYLVLSLALSFFHIIRRSSAAKSRILLVFLDTVMFXXXXXXXXXXXXIVYVSH 137
+N G+L+LSL S I+R AA R LLV +D V+ +VY++H
Sbjct: 112 VANGAAAGFLILSLPFSIVCIVR-PLAAGPRFLLVIVDLVLMALVVAAASSAAAVVYLAH 170
Query: 138 YGNVNANWFPFCGQYNHFCERISGSLIGSFIAVVIFMIIILMSAVSISK 186
G+ +ANW C Q+ FC+ S +++ SF+A V ++++S+V++ +
Sbjct: 171 NGSQDANWNAICQQFTDFCQGSSLAVVASFVASVFLACLVVVSSVALKR 219
>Medtr2g086740.2 | plant integral membrane protein | HC |
chr2:36464677-36466663 | 20130731
Length = 155
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Query: 18 RKGMIRGLSIMDFILRIVAAIXXXXXXXXXXXXRETLPFTTQFVKFRAVFDDLPTFVFFV 77
+ GM +G++I+DFILR+ A + LPF TQF++F A +DD P F FFV
Sbjct: 52 KGGMKKGIAILDFILRLGAIGAALGAAVIMGTNEQILPFFTQFLQFHAQWDDFPMFKFFV 111
Query: 78 TSNSIVCGYLVLSLALSFFHIIRRSSAAKSRILLVFLDTV 117
+N G+L+LSL S I+ R AA R LLV +D V
Sbjct: 112 VANGAAAGFLILSLPFSIVCIV-RPLAAGPRFLLVIVDLV 150
>Medtr0004s0210.1 | CASP POPTRDRAFT-like protein | HC |
scaffold0004:83573-81269 | 20130731
Length = 163
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 61 VKFRAVFDDLPTFVFFVTSNSIVCGYLVLSLALSFFHIIRRSSAAKSRILLVFLDTVMFX 120
V F A + + P F +FV +NSIV Y FF + + + R L+V +D V+
Sbjct: 39 VSFEAKYTNSPAFKYFVIANSIVTVY-------GFFVLFLPAESLLWR-LVVAMDMVLTM 90
Query: 121 XXXXXXXXXXXIVYVSHYGNVNANWFPFCGQYNHFCERISGSLIGSFIAVVIFMIIILMS 180
I V+ GN A W P CG FC ++G+L+ SFI V+I++I++L S
Sbjct: 91 LLISSISAALAIAQVAKNGNNYAAWLPICGSVPKFCNHMTGALVASFIGVIIYLILLLHS 150
>Medtr5g076480.1 | CASP POPTRDRAFT-like protein | HC |
chr5:32632182-32630106 | 20130731
Length = 209
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
Query: 67 FDDLPTFVFFVTSNSIVCGYLVLSLALSFFHIIRRSSAAKSRILLVFLDTVMFXXXXXXX 126
+ DL F + V +N I GY + S + + R S+ K+ + LD V
Sbjct: 70 YSDLGAFRYLVHANGICAGYSLFSAVI--VAVPRPSTMPKAWAFFL-LDQVQTYIILAAG 126
Query: 127 XXXXXIVYVSHYGNVNANWFPFCGQYNHFCERISGSLIGSFIAVVIFMIIILMSA 181
++Y++ YG A W CG + FC +I SL+ +FIAVV ++++ L+S+
Sbjct: 127 AVLTEVLYLAEYGVPTAGWSSACGSFGSFCHKIKASLVITFIAVVCYILLSLISS 181
>Medtr7g108130.1 | plant integral membrane protein | HC |
chr7:43972040-43974109 | 20130731
Length = 191
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 75/155 (48%), Gaps = 6/155 (3%)
Query: 26 SIMDFILRIVAAIXXXXXXXXXXXXRETLPFTTQFVKFR--AVFDDLPTFVFFVTSNSIV 83
+++D +LR++ + +ET + ++F+ A ++ + VFF+ +N+I
Sbjct: 27 NVLDVLLRVLGFLLTLTATIIVGFGKETKVISYASLQFKVTAKWEYMSAIVFFLVTNAIG 86
Query: 84 CGYLVLSLALSFFHIIRRSSAAKSRILLV-FLDTVMFXXXXXXXXXXXXIVYVSHYGNVN 142
C Y +S+ +S I R+S K+ +L++ LD V+ + + GN +
Sbjct: 87 CSYAAISMVVS---TIARTSGNKTALLMITLLDLVIMALLFSANGAAGAVGVLGQKGNSH 143
Query: 143 ANWFPFCGQYNHFCERISGSLIGSFIAVVIFMIII 177
W C ++ +C ++ +L+ S I +F++++
Sbjct: 144 VQWMKVCNVFDAYCRHMTVALVLSIIGSTVFLLLV 178
>Medtr4g118800.1 | plant integral membrane protein | HC |
chr4:49224515-49222579 | 20130731
Length = 187
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 55/120 (45%)
Query: 65 AVFDDLPTFVFFVTSNSIVCGYLVLSLALSFFHIIRRSSAAKSRILLVFLDTVMFXXXXX 124
A F P FV+FV + S+ Y +++ +S I + + K + L+F D VM
Sbjct: 62 AKFRYSPAFVYFVAAFSVAGLYSIITTFISLSAIRKPNLKTKLLLHLIFWDAVMLGILAS 121
Query: 125 XXXXXXXIVYVSHYGNVNANWFPFCGQYNHFCERISGSLIGSFIAVVIFMIIILMSAVSI 184
+ Y+ GN + +W C Y+ FC I S+ ++ +++I +SA SI
Sbjct: 122 ATGTAGSVAYLGLKGNKHTDWHKICHIYDKFCRHIGASVGVGLFGSIVTLLLIWISAHSI 181
>Medtr0097s0070.1 | CASP POPTRDRAFT-like protein | HC |
scaffold0097:39509-37693 | 20130731
Length = 201
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 1/116 (0%)
Query: 65 AVFDDLPTFVFFVTSNSIVCGYLVLSLALSFFHIIRRSSAAKSRILLVFLDTVMFXXXXX 124
A F+ P FVFFV +N + ++ +AL + L+ LD +
Sbjct: 71 AKFNQTPAFVFFVIANGNASLHNLVMIALDILGP-QYDYKGLRLALIAILDMLTMALASA 129
Query: 125 XXXXXXXIVYVSHYGNVNANWFPFCGQYNHFCERISGSLIGSFIAVVIFMIIILMS 180
+ + GN +A W C ++ +C R G+LI SFI ++ +II +MS
Sbjct: 130 GDGAATFMSALGRNGNSHARWDKICDKFESYCNRGGGALIASFIGFILLLIITVMS 185
>Medtr8g089300.1 | CASP POPTRDRAFT-like protein | HC |
chr8:37100964-37099766 | 20130731
Length = 194
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 3/177 (1%)
Query: 6 VETG--EISQVSAPRKGMIRGLSIMDFILRIVAAIXXXXXXXXXXXXRETLPFTTQFVKF 63
+E+G ++ + + ++ L ++ F+ + A + T+ T V
Sbjct: 9 IESGFNDVPETKPKKDWILLSLRVVAFLAAVSATLVMSLNKQTKTFVVATIGSTPITVPL 68
Query: 64 RAVFDDLPTFVFFVTSNSIVCGYLVLSLALSFFHIIRRSSAAKSRILLVFLDTVMFXXXX 123
A F P FV+FV N IV + ++ +A+ + + ++ VF DT+
Sbjct: 69 TAKFQHTPAFVYFVVPNGIVSLHNLVMIAMYILGPKFHNKGLQLALIAVF-DTMALALAS 127
Query: 124 XXXXXXXXIVYVSHYGNVNANWFPFCGQYNHFCERISGSLIGSFIAVVIFMIIILMS 180
+ + GN +A W C ++ +C R GSLI SFI +++ +II +MS
Sbjct: 128 SGDGAATAMSELGRNGNSHAKWNKICDKFESYCNRGGGSLIASFIGLILLLIITVMS 184
>Medtr3g064310.1 | CASP POPTRDRAFT-like protein | HC |
chr3:28945240-28941390 | 20130731
Length = 217
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 14/120 (11%)
Query: 67 FDDLPTFVFFVTSNSIVCGYLVLSLALSFFHIIRRSSAAKSRILL-----VFLDTVMFXX 121
++DL F + V +N I GY +LS + AA LL FLD V+
Sbjct: 78 YNDLGAFRYLVHANGICAGYSLLSAVVV---------AAPRPTLLRAWTFFFLDQVLTYI 128
Query: 122 XXXXXXXXXXIVYVSHYGNVNANWFPFCGQYNHFCERISGSLIGSFIAVVIFMIIILMSA 181
+VY++ G+ W CG + FC +++ S+ +F+A+ ++I+ L+S+
Sbjct: 129 ILSAGASSMEVVYLAENGDSATVWNSACGSFGQFCHKVTASVAITFVALFCYVILSLISS 188
>Medtr7g083120.1 | plant integral membrane protein | HC |
chr7:31937630-31935708 | 20130731
Length = 186
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 6/112 (5%)
Query: 61 VKFRAVFDDLPTFVFFVTSNSIVCGYLVLSLALSFFHIIRRSSAAKSR---ILLVFLDTV 117
++F A F +F FFV +N +VC VL+L F+++ R + + LL +D V
Sbjct: 61 IRFEAHFYYTSSFKFFVAANGVVCFMSVLTL---IFNLLMRQQTPQRKDYYFLLFLVDLV 117
Query: 118 MFXXXXXXXXXXXXIVYVSHYGNVNANWFPFCGQYNHFCERISGSLIGSFIA 169
M + YV YG + W C FC+ SL+ S++A
Sbjct: 118 MTVLLIAGCSAATAVGYVGQYGEKHVGWTAICDHVQKFCKTNLISLLLSYLA 169