Miyakogusa Predicted Gene
- Lj3g3v2706660.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2706660.1 tr|Q5JQR9|Q5JQR9_ORYSJ OSJNba0093F12.23 protein
OS=Oryza sativa subsp. japonica GN=OSJNba0093F12.23
,58.97,5e-17,PWWP,PWWP; seg,NULL;
Tudor/PWWP/MBT,NULL,NODE_50711_length_2641_cov_32.661114.path2.1
(740 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g015580.1 | tudor/PWWP/MBT superfamily protein | HC | chr8... 650 0.0
Medtr8g015580.2 | tudor/PWWP/MBT superfamily protein | HC | chr8... 650 0.0
Medtr5g007980.1 | tudor/PWWP/MBT superfamily protein | HC | chr5... 160 5e-39
Medtr4g077550.1 | tudor/PWWP/MBT superfamily protein | HC | chr4... 152 1e-36
>Medtr8g015580.1 | tudor/PWWP/MBT superfamily protein | HC |
chr8:5106477-5100906 | 20130731
Length = 782
Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/755 (51%), Positives = 452/755 (59%), Gaps = 29/755 (3%)
Query: 1 MGSSGE---NGIDASEGGLVWVRRRNGSWWPGRIMGLHELSESSLVSPRSGTPVKLLGRE 57
MGSS E NGI+AS GGLVWVRRRNGSWWPGRIM L ELS+ LVSPRSGTPVKLLGR+
Sbjct: 7 MGSSEESNINGINASVGGLVWVRRRNGSWWPGRIMSLDELSDGCLVSPRSGTPVKLLGRD 66
Query: 58 DASVDWYNLERSKRVKPFRCGEYDDCIEXXXXXXXXXXXXXXXYARREDAILHALELESA 117
DASVDWYNLE+SKRVK FRC EY + IE YARREDAILHALELESA
Sbjct: 67 DASVDWYNLEKSKRVKAFRCREYAEAIEKAKASAAGLGKKAVKYARREDAILHALELESA 126
Query: 118 RLGKESLNFCSRSDTLGGEPVGLAGESPIIS-CSGXXXXXXXXXXXXXXXXXXXXXXXHQ 176
L K L CSRSD E AGE P++S S Q
Sbjct: 127 HLDKAPLPLCSRSDKSDSEHGEPAGELPVMSNSSDDGNEDVIDDLSDSEDNSNSAPELSQ 186
Query: 177 SEISLEEPNQNGSSKMQSLQGRRRRTPNDSEDDGTEGVKRMRGLEDLGIGVVPKTKVLGA 236
S IS EEPN NGS K+ S+QGRRRRTPNDSEDDGTEGVKRM+GLEDLG GVV K G
Sbjct: 187 SGISFEEPNHNGSLKIPSMQGRRRRTPNDSEDDGTEGVKRMKGLEDLGNGVVSNRKGQGL 246
Query: 237 GTPEIAQQDGALSGNSNTGNFLVNGTFVNGGKGHFSTLKRRRTQVANVHESLKRKNRRRP 296
G EIAQ A +S TGN L NGT VN GK +S+LKR+R+QV NVHE LKRKNRRR
Sbjct: 247 GPTEIAQHVSASLNDSMTGNGLANGTSVNVGK-TYSSLKRKRSQVGNVHELLKRKNRRRT 305
Query: 297 LTKVLESTAMVSVPAICDGLTSSISSPSLGVTYSSNPSTLYSNELQERSPLANHVFVSTE 356
LTKVLESTAMVSVP CD S SSP G+T ++ + N+ + E
Sbjct: 306 LTKVLESTAMVSVPVTCDQPPGSSSSPPCGITDVKISGLDSTDSKKPSGKEINNSDSAAE 365
Query: 357 AAFENGTSADIQEDGRETSQTNYTV-KENEASGISGQIWNDFSDKLFDVPFMKVGREERP 415
A ENGTS + + G + Q N+ + KENE + I G + D SD LFDVP + V EE+P
Sbjct: 366 TACENGTSLTVHDQGSDIPQINHRIKKENETTEIPGLVGYDSSDILFDVPLVGVLEEEKP 425
Query: 416 LTGFSPVLASCSSGKPGVDVLGQQSRHLGQSEALSARN-EGYSTGFTSSIADHNITDLRA 474
G SP L SCS G P V L Q+S QSEA + RN G TSS H+I A
Sbjct: 426 SPGISPTLVSCSFGMPEVSALEQKSCEASQSEAFALRNGSKNEAGCTSSAVGHDIVSDGA 485
Query: 475 EIGSSEWLSKGKRNSRHAR---KEALRTHVDMYDKFSTHLAGVENSDGYSQGTG--QKAD 529
E SS+W SKGKRN RH K+ R ++ M + +L G NSDG +G G QK D
Sbjct: 486 EKDSSKWQSKGKRNLRHKSKNGKQVSRKYIGMDGESDAYLTGTRNSDGLCEGAGQKQKID 545
Query: 530 WNITGAPVASYNGTSQARCKQVAEGELGGFRDLSKRIKGTRDVKLLPDRSLTPQVSLPYR 589
WN TG AS N TSQ CK VAEG++ GFRDLSK I+GT + PQ SLPYR
Sbjct: 546 WNGTGVSNASNNCTSQINCKTVAEGQVEGFRDLSKHIEGT--------TAEPPQRSLPYR 597
Query: 590 QPRLPLAPNHPMLDCPGRNSCSDGSLYDVKIEIKSSYRPQHVPLVSLASKLNSQAFIGHP 649
Q R + + D PGRN SDG+LYDVK+E+KSSYRPQHVPLVSLASKL+ +AFIGHP
Sbjct: 598 QSRFAINSRYETADFPGRNCSSDGTLYDVKLEVKSSYRPQHVPLVSLASKLSGKAFIGHP 657
Query: 650 LTVEVMPDGQCDDMMRMYGPGLEGGDTSGVVKPR---IKPXXXXXXXXXXXXXXXXXXXX 706
LTVEV+ DG CD M+ +E D VVKP+ +
Sbjct: 658 LTVEVLEDGHCDKMLSGLRRDVEVDDIDCVVKPKPVTTRRPKRSSHFSRRKSSKSKKSGL 717
Query: 707 XXXXTRKLSSLTGQKKSERK------KVGTPVVAA 735
RKLSSLTG ++SE K K+ PV+A
Sbjct: 718 LNKKIRKLSSLTGHRQSEEKRKPVVDKLKGPVIAC 752
>Medtr8g015580.2 | tudor/PWWP/MBT superfamily protein | HC |
chr8:5106185-5100906 | 20130731
Length = 782
Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/755 (51%), Positives = 452/755 (59%), Gaps = 29/755 (3%)
Query: 1 MGSSGE---NGIDASEGGLVWVRRRNGSWWPGRIMGLHELSESSLVSPRSGTPVKLLGRE 57
MGSS E NGI+AS GGLVWVRRRNGSWWPGRIM L ELS+ LVSPRSGTPVKLLGR+
Sbjct: 7 MGSSEESNINGINASVGGLVWVRRRNGSWWPGRIMSLDELSDGCLVSPRSGTPVKLLGRD 66
Query: 58 DASVDWYNLERSKRVKPFRCGEYDDCIEXXXXXXXXXXXXXXXYARREDAILHALELESA 117
DASVDWYNLE+SKRVK FRC EY + IE YARREDAILHALELESA
Sbjct: 67 DASVDWYNLEKSKRVKAFRCREYAEAIEKAKASAAGLGKKAVKYARREDAILHALELESA 126
Query: 118 RLGKESLNFCSRSDTLGGEPVGLAGESPIIS-CSGXXXXXXXXXXXXXXXXXXXXXXXHQ 176
L K L CSRSD E AGE P++S S Q
Sbjct: 127 HLDKAPLPLCSRSDKSDSEHGEPAGELPVMSNSSDDGNEDVIDDLSDSEDNSNSAPELSQ 186
Query: 177 SEISLEEPNQNGSSKMQSLQGRRRRTPNDSEDDGTEGVKRMRGLEDLGIGVVPKTKVLGA 236
S IS EEPN NGS K+ S+QGRRRRTPNDSEDDGTEGVKRM+GLEDLG GVV K G
Sbjct: 187 SGISFEEPNHNGSLKIPSMQGRRRRTPNDSEDDGTEGVKRMKGLEDLGNGVVSNRKGQGL 246
Query: 237 GTPEIAQQDGALSGNSNTGNFLVNGTFVNGGKGHFSTLKRRRTQVANVHESLKRKNRRRP 296
G EIAQ A +S TGN L NGT VN GK +S+LKR+R+QV NVHE LKRKNRRR
Sbjct: 247 GPTEIAQHVSASLNDSMTGNGLANGTSVNVGK-TYSSLKRKRSQVGNVHELLKRKNRRRT 305
Query: 297 LTKVLESTAMVSVPAICDGLTSSISSPSLGVTYSSNPSTLYSNELQERSPLANHVFVSTE 356
LTKVLESTAMVSVP CD S SSP G+T ++ + N+ + E
Sbjct: 306 LTKVLESTAMVSVPVTCDQPPGSSSSPPCGITDVKISGLDSTDSKKPSGKEINNSDSAAE 365
Query: 357 AAFENGTSADIQEDGRETSQTNYTV-KENEASGISGQIWNDFSDKLFDVPFMKVGREERP 415
A ENGTS + + G + Q N+ + KENE + I G + D SD LFDVP + V EE+P
Sbjct: 366 TACENGTSLTVHDQGSDIPQINHRIKKENETTEIPGLVGYDSSDILFDVPLVGVLEEEKP 425
Query: 416 LTGFSPVLASCSSGKPGVDVLGQQSRHLGQSEALSARN-EGYSTGFTSSIADHNITDLRA 474
G SP L SCS G P V L Q+S QSEA + RN G TSS H+I A
Sbjct: 426 SPGISPTLVSCSFGMPEVSALEQKSCEASQSEAFALRNGSKNEAGCTSSAVGHDIVSDGA 485
Query: 475 EIGSSEWLSKGKRNSRHAR---KEALRTHVDMYDKFSTHLAGVENSDGYSQGTG--QKAD 529
E SS+W SKGKRN RH K+ R ++ M + +L G NSDG +G G QK D
Sbjct: 486 EKDSSKWQSKGKRNLRHKSKNGKQVSRKYIGMDGESDAYLTGTRNSDGLCEGAGQKQKID 545
Query: 530 WNITGAPVASYNGTSQARCKQVAEGELGGFRDLSKRIKGTRDVKLLPDRSLTPQVSLPYR 589
WN TG AS N TSQ CK VAEG++ GFRDLSK I+GT + PQ SLPYR
Sbjct: 546 WNGTGVSNASNNCTSQINCKTVAEGQVEGFRDLSKHIEGT--------TAEPPQRSLPYR 597
Query: 590 QPRLPLAPNHPMLDCPGRNSCSDGSLYDVKIEIKSSYRPQHVPLVSLASKLNSQAFIGHP 649
Q R + + D PGRN SDG+LYDVK+E+KSSYRPQHVPLVSLASKL+ +AFIGHP
Sbjct: 598 QSRFAINSRYETADFPGRNCSSDGTLYDVKLEVKSSYRPQHVPLVSLASKLSGKAFIGHP 657
Query: 650 LTVEVMPDGQCDDMMRMYGPGLEGGDTSGVVKPR---IKPXXXXXXXXXXXXXXXXXXXX 706
LTVEV+ DG CD M+ +E D VVKP+ +
Sbjct: 658 LTVEVLEDGHCDKMLSGLRRDVEVDDIDCVVKPKPVTTRRPKRSSHFSRRKSSKSKKSGL 717
Query: 707 XXXXTRKLSSLTGQKKSERK------KVGTPVVAA 735
RKLSSLTG ++SE K K+ PV+A
Sbjct: 718 LNKKIRKLSSLTGHRQSEEKRKPVVDKLKGPVIAC 752
>Medtr5g007980.1 | tudor/PWWP/MBT superfamily protein | HC |
chr5:1623285-1617399 | 20130731
Length = 621
Score = 160 bits (404), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 83/149 (55%), Positives = 93/149 (62%), Gaps = 8/149 (5%)
Query: 1 MGSSGENGIDASEGGLVWVRRRNGSWWPGRIMGLHELSESSLVSPRSGTPVKLLGREDAS 60
M G D + G LVWVRRRNGSWWPG+I+ +L+ S L SPRSGTPVKLLGREDAS
Sbjct: 1 MDGEGLGAEDCAVGSLVWVRRRNGSWWPGQILDPDDLAASHLTSPRSGTPVKLLGREDAS 60
Query: 61 VDWYNLERSKRVKPFRCGEYDDCIEXXXXXXXXXXXXXXXYARREDAILHALELESARLG 120
VDWYNLE+SKRVKPFRCGE+D IE YARREDAILHALELE L
Sbjct: 61 VDWYNLEKSKRVKPFRCGEFDASIERAETALGMPLKKREKYARREDAILHALELERQMLR 120
Query: 121 KESLNFCSRSDTLGGEPVGLAGESPIISC 149
K+ D LG +G A + C
Sbjct: 121 KQ--------DKLGSGQIGAAFRAKRSKC 141
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 615 LYDVKIEIKSSYRPQHVPLVSLASKLNSQAFIGHPLTVEVMPDGQCDDMMRM---YGPGL 671
L DV +++++SY + VP+VS+ SKL+ + IG P+ +EV+ DG D++ + +
Sbjct: 390 LVDVDLKVQASYPKESVPIVSITSKLDGSSIIGRPIQIEVLKDGSTDNLFSAIDDFSNDM 449
Query: 672 EGGDTSGVVKP 682
G + S V+ P
Sbjct: 450 IGYEGSSVLPP 460
>Medtr4g077550.1 | tudor/PWWP/MBT superfamily protein | HC |
chr4:29681931-29685319 | 20130731
Length = 736
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/115 (64%), Positives = 83/115 (72%), Gaps = 1/115 (0%)
Query: 9 IDASEGGLVWVRRRNGSWWPGRIMGLHELSESSLVSP-RSGTPVKLLGREDASVDWYNLE 67
+D G +VWVRRRNGSWWPG+I+G + S S L SP RSGTPVKLLGREDASVDWYNLE
Sbjct: 1 MDCGVGSIVWVRRRNGSWWPGQIIGPDDHSTSHLTSPPRSGTPVKLLGREDASVDWYNLE 60
Query: 68 RSKRVKPFRCGEYDDCIEXXXXXXXXXXXXXXXYARREDAILHALELESARLGKE 122
+SKRVK FRCGE+DD IE YARREDAILHALELE + K+
Sbjct: 61 KSKRVKAFRCGEFDDYIEKIEASHEMPLKKREKYARREDAILHALELERELVKKQ 115
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 6/65 (9%)
Query: 615 LYDVKIEIKSSYRPQHVPLVSLASKLNSQAFIGHPLTVEVMPDGQCD------DMMRMYG 668
L +V + +++ YR + VP++SL SKL+ +A IGHP+ VEV+ DG D D G
Sbjct: 511 LINVDVRVQAGYRKEPVPIISLMSKLDGKAIIGHPIQVEVLKDGSSDTFFSAIDDFSNEG 570
Query: 669 PGLEG 673
G+EG
Sbjct: 571 IGIEG 575