Miyakogusa Predicted Gene

Lj3g3v2693120.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2693120.1 Non Characterized Hit- tr|C5XNT4|C5XNT4_SORBI
Putative uncharacterized protein Sb03g025940 OS=Sorghu,38.93,1e-17,
,CUFF.44434.1
         (173 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g016210.1 | transmembrane protein, putative | HC | chr8:54...   207   3e-54
Medtr8g016220.1 | transmembrane protein, putative | HC | chr8:54...   190   6e-49
Medtr8g016210.2 | transmembrane protein, putative | HC | chr8:54...   161   3e-40
Medtr8g016220.2 | transmembrane protein, putative | HC | chr8:54...   151   3e-37
Medtr8g010670.1 | MIRO-like protein | HC | chr8:2820580-2816047 ...   108   3e-24
Medtr4g126360.1 | transmembrane protein, putative | HC | chr4:52...   102   2e-22

>Medtr8g016210.1 | transmembrane protein, putative | HC |
           chr8:5432634-5428371 | 20130731
          Length = 183

 Score =  207 bits (528), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 122/183 (66%), Positives = 140/183 (76%), Gaps = 10/183 (5%)

Query: 1   MSEGGDQG----APKLYNHKPRKAQLKQSKGQHK---FSSPPGMGTQTTAXXXXXXXKES 53
           MSEGG       +PKLYNHKP+K+QLKQ +GQ K   FSSPP MGTQT         KE 
Sbjct: 1   MSEGGGSADHASSPKLYNHKPKKSQLKQFRGQQKSNEFSSPPSMGTQTAPPPPPPLPKEP 60

Query: 54  FARRYKYLWPMLLAVNLGVGAYLFVRT--KKKDIGEEEQDASP-VPVKETVAHVAETRVS 110
           F +RYK++WPMLLAVN G+G YLF RT  KK+D   EE+DA+P + VK+T A VA T  S
Sbjct: 61  FIKRYKFVWPMLLAVNFGIGVYLFARTSTKKEDTEVEEKDAAPPISVKDTTAPVAVTSAS 120

Query: 111 PAPIASPVIEREPIPVDQQRELFKWILEEKRKVKPKDAEEKRKIDEEKALLKNLIRSKSI 170
           P PIA+PVI+REPIP  QQRELFKWILEEKR +KPKD+EEKRKI+EEKALLKNLIRSKSI
Sbjct: 121 PPPIANPVIKREPIPEGQQRELFKWILEEKRNIKPKDSEEKRKIEEEKALLKNLIRSKSI 180

Query: 171 PSI 173
           PSI
Sbjct: 181 PSI 183


>Medtr8g016220.1 | transmembrane protein, putative | HC |
           chr8:5439059-5435697 | 20130731
          Length = 175

 Score =  190 bits (482), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 110/179 (61%), Positives = 135/179 (75%), Gaps = 10/179 (5%)

Query: 1   MSEGG-DQGA-PKLYNHKPRKAQLKQSKGQ--HKFSSPPGMGTQTTAXXXXXXXKESFAR 56
           MSEGG D G+ PKLYNHKP+ +QLKQ +GQ  ++FSS   MG QT A       KE F +
Sbjct: 1   MSEGGADHGSSPKLYNHKPKISQLKQFQGQKSNEFSSQSSMGAQT-APPPPPLPKEPFIK 59

Query: 57  RYKYLWPMLLAVNLGVGAYLFVRT--KKKDIGEEEQDASPVPVKETVAHVAETRVSPAPI 114
            YK+ +P+LLA   GVG Y  +RT  KKK+  ++E+DA+PV +K+T A V +T VSP   
Sbjct: 60  HYKFFFPVLLA---GVGVYWALRTNTKKKETVDDEKDATPVSIKDTTAPVVKTSVSPPLT 116

Query: 115 ASPVIEREPIPVDQQRELFKWILEEKRKVKPKDAEEKRKIDEEKALLKNLIRSKSIPSI 173
           A+ VI+REPIP  QQRELFKWILEEKRK+KPKD+EEK++IDEEKALLKNLIRSKSIPSI
Sbjct: 117 ANTVIKREPIPEGQQRELFKWILEEKRKIKPKDSEEKQRIDEEKALLKNLIRSKSIPSI 175


>Medtr8g016210.2 | transmembrane protein, putative | HC |
           chr8:5432407-5428371 | 20130731
          Length = 140

 Score =  161 bits (408), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 96/140 (68%), Positives = 110/140 (78%), Gaps = 3/140 (2%)

Query: 37  MGTQTTAXXXXXXXKESFARRYKYLWPMLLAVNLGVGAYLFVRT--KKKDIGEEEQDASP 94
           MGTQT         KE F +RYK++WPMLLAVN G+G YLF RT  KK+D   EE+DA+P
Sbjct: 1   MGTQTAPPPPPPLPKEPFIKRYKFVWPMLLAVNFGIGVYLFARTSTKKEDTEVEEKDAAP 60

Query: 95  -VPVKETVAHVAETRVSPAPIASPVIEREPIPVDQQRELFKWILEEKRKVKPKDAEEKRK 153
            + VK+T A VA T  SP PIA+PVI+REPIP  QQRELFKWILEEKR +KPKD+EEKRK
Sbjct: 61  PISVKDTTAPVAVTSASPPPIANPVIKREPIPEGQQRELFKWILEEKRNIKPKDSEEKRK 120

Query: 154 IDEEKALLKNLIRSKSIPSI 173
           I+EEKALLKNLIRSKSIPSI
Sbjct: 121 IEEEKALLKNLIRSKSIPSI 140


>Medtr8g016220.2 | transmembrane protein, putative | HC |
           chr8:5439056-5435697 | 20130731
          Length = 135

 Score =  151 bits (381), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 86/139 (61%), Positives = 105/139 (75%), Gaps = 6/139 (4%)

Query: 37  MGTQTTAXXXXXXXKESFARRYKYLWPMLLAVNLGVGAYLFVRT--KKKDIGEEEQDASP 94
           MG QT A       KE F + YK+ +P+LLA   GVG Y  +RT  KKK+  ++E+DA+P
Sbjct: 1   MGAQT-APPPPPLPKEPFIKHYKFFFPVLLA---GVGVYWALRTNTKKKETVDDEKDATP 56

Query: 95  VPVKETVAHVAETRVSPAPIASPVIEREPIPVDQQRELFKWILEEKRKVKPKDAEEKRKI 154
           V +K+T A V +T VSP   A+ VI+REPIP  QQRELFKWILEEKRK+KPKD+EEK++I
Sbjct: 57  VSIKDTTAPVVKTSVSPPLTANTVIKREPIPEGQQRELFKWILEEKRKIKPKDSEEKQRI 116

Query: 155 DEEKALLKNLIRSKSIPSI 173
           DEEKALLKNLIRSKSIPSI
Sbjct: 117 DEEKALLKNLIRSKSIPSI 135


>Medtr8g010670.1 | MIRO-like protein | HC | chr8:2820580-2816047 |
           20130731
          Length = 488

 Score =  108 bits (269), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 58/82 (70%), Positives = 67/82 (81%), Gaps = 1/82 (1%)

Query: 92  ASPVPVKETVAHVAETRVSPAPIASPVIEREPIPVDQQRELFKWILEEKRKVKPKDAEEK 151
           A  +  K+  + V ET VSPAP A+P I+RE IP DQ+R LFKWILEEKRK+KPKDA+EK
Sbjct: 408 AKLIKFKDITSPVVETHVSPAPTANPGIKRE-IPEDQRRGLFKWILEEKRKIKPKDAKEK 466

Query: 152 RKIDEEKALLKNLIRSKSIPSI 173
           +KIDEEKALLKNLIRSKSIP I
Sbjct: 467 QKIDEEKALLKNLIRSKSIPHI 488


>Medtr4g126360.1 | transmembrane protein, putative | HC |
           chr4:52568592-52571729 | 20130731
          Length = 147

 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 57/132 (43%), Positives = 80/132 (60%), Gaps = 16/132 (12%)

Query: 56  RRYKYLWPMLLAVNLGVGAYLFVRTKKKDIGEEEQ--------------DASPVPVKETV 101
           +R+K++W  LL  NL +GA+LF   K++D  E ++              +  P P   +V
Sbjct: 18  KRFKFVWRFLLLSNLALGAFLFASAKRRDSMEIQKKRTAHRLHKSKAAVEVPPEPSTSSV 77

Query: 102 AHVAETRVSPAPIASPVIEREPIPVDQQRELFKWILEEKRKVKPKDAEEKRKIDEEKALL 161
               E  + PA +  P+  R PIP +QQRE+FKWILEEKRKVKPKDA EK++IDE+K +L
Sbjct: 78  DLNYEDFLVPATM--PMEVRAPIPDEQQREVFKWILEEKRKVKPKDAMEKKQIDEDKDIL 135

Query: 162 KNLIRSKSIPSI 173
           K  +R+ SIP  
Sbjct: 136 KQFLRANSIPKF 147