Miyakogusa Predicted Gene

Lj3g3v2658840.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2658840.3 tr|A9S0G0|A9S0G0_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,43.52,2e-18, ,CUFF.44338.3
         (107 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g019510.1 | rossmann-fold NAD(P)-binding domain protein | ...   182   6e-47
Medtr8g019510.2 | rossmann-fold NAD(P)-binding domain protein | ...   120   3e-28

>Medtr8g019510.1 | rossmann-fold NAD(P)-binding domain protein | HC
           | chr8:6876130-6872011 | 20130731
          Length = 309

 Score =  182 bits (462), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 89/107 (83%), Positives = 97/107 (90%)

Query: 1   MGQMVILQLIVKKARIKTLVKDKRVALEAFGNYVESMAGDTKDNRFLKKALRGVRTIICP 60
           +GQMVIL LIV K+RIK LVKDKRVALEAFGNYVESM GDT DNRFL+KALRGV TIICP
Sbjct: 110 IGQMVILSLIVNKSRIKALVKDKRVALEAFGNYVESMTGDTSDNRFLRKALRGVCTIICP 169

Query: 61  NEGFPSSVGSLQGVQHVIFLSQLSVYSGKSGIQSMMKSNAGKLAGQD 107
           NEGF SSVGSLQGV+HV+ LSQLSVYSGK+GI+SMMK+NA KLA QD
Sbjct: 170 NEGFISSVGSLQGVKHVVLLSQLSVYSGKTGIESMMKNNAKKLAEQD 216


>Medtr8g019510.2 | rossmann-fold NAD(P)-binding domain protein | HC
           | chr8:6876124-6872336 | 20130731
          Length = 283

 Score =  120 bits (301), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 67/107 (62%), Positives = 74/107 (69%), Gaps = 26/107 (24%)

Query: 1   MGQMVILQLIVKKARIKTLVKDKRVALEAFGNYVESMAGDTKDNRFLKKALRGVRTIICP 60
           +GQMVIL LIV K+RIK LVKDKRVALEAFGNYVE                         
Sbjct: 110 IGQMVILSLIVNKSRIKALVKDKRVALEAFGNYVE------------------------- 144

Query: 61  NEGFPSSVGSLQGVQHVIFLSQLSVYSGKSGIQSMMKSNAGKLAGQD 107
            EGF SSVGSLQGV+HV+ LSQLSVYSGK+GI+SMMK+NA KLA QD
Sbjct: 145 -EGFISSVGSLQGVKHVVLLSQLSVYSGKTGIESMMKNNAKKLAEQD 190