Miyakogusa Predicted Gene

Lj3g3v2657810.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2657810.1 Non Characterized Hit- tr|Q9LIV4|Q9LIV4_ORYSJ
Putative uncharacterized protein OS=Oryza sativa subsp,39.16,2e-19,
,CUFF.44334.1
         (173 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g108630.1 | transmembrane protein, putative | HC | chr3:50...   119   1e-27
Medtr1g010110.1 | transmembrane protein, putative | HC | chr1:17...   117   5e-27
Medtr3g065530.1 | transmembrane protein, putative | LC | chr3:29...    60   7e-10
Medtr1g010180.1 | transmembrane protein, putative | HC | chr1:17...    60   1e-09

>Medtr3g108630.1 | transmembrane protein, putative | HC |
           chr3:50158969-50161016 | 20130731
          Length = 185

 Score =  119 bits (298), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/156 (41%), Positives = 96/156 (61%), Gaps = 5/156 (3%)

Query: 1   MAATVQQMVRSTVIVLGILAVLFGFMADNTKPVAGTPLLAGDGTRTCNFPHDPTTALRYP 60
           MAA+++ M  + V +LG ++ + G +A+N KP +GTP+   DG  TC FP DPT AL Y 
Sbjct: 1   MAASIKHMALA-VSLLGFVSFILGVIAENKKPASGTPIAVKDGV-TCKFPSDPTVALGYL 58

Query: 61  LTG--ISYCILRDWAPVYPYKGKVVPKRAMFKNRLFTGFFSLALFITGSATTMLLWPTIP 118
                I+  ++   +  YPY+GK VP+  +FK+  F  FF++ALF +G A T+LLWP I 
Sbjct: 59  SVAFLIASTVVGYLSLFYPYQGKSVPQGVLFKHTTFLVFFNIALFSSGLAATLLLWPVIT 118

Query: 119 QQVHLKNNVYHDFSHECPPVKTSDDLGVGVILIIDS 154
           +Q+HL   V+ D ++ CP  KT   +G G  L +DS
Sbjct: 119 EQIHLSRKVHLDANYACPTAKTG-LIGGGAFLSLDS 153


>Medtr1g010110.1 | transmembrane protein, putative | HC |
           chr1:1747295-1745637 | 20130731
          Length = 193

 Score =  117 bits (294), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 64/143 (44%), Positives = 89/143 (62%), Gaps = 4/143 (2%)

Query: 1   MAATVQQMVRSTVIVLGILAVLFGFMADNTKPVAGTPLLAGDGTR-TCNFPHDPTTALRY 59
           M ATV+QM  S V V G+++ + G +A+N KP AGTP+ + D    TC +P DPT  L  
Sbjct: 1   MVATVKQM-GSIVTVCGVVSFVLGVIAENKKPAAGTPVPSNDRVSVTCRYPSDPTVVLGV 59

Query: 60  PLTG--ISYCILRDWAPVYPYKGKVVPKRAMFKNRLFTGFFSLALFITGSATTMLLWPTI 117
             T   I   ++   +  YPYKGK+VP+ AM K+  F+ FF++ALF TG A   L+WPTI
Sbjct: 60  LSTVFLIVSTVVGYMSLFYPYKGKIVPQGAMLKHFCFSAFFNVALFTTGLAAMFLIWPTI 119

Query: 118 PQQVHLKNNVYHDFSHECPPVKT 140
            +Q+HL  NV+ D ++ CP  KT
Sbjct: 120 TEQLHLTRNVHLDINYTCPTAKT 142


>Medtr3g065530.1 | transmembrane protein, putative | LC |
           chr3:29621601-29620134 | 20130731
          Length = 185

 Score = 60.5 bits (145), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 68/145 (46%), Gaps = 8/145 (5%)

Query: 1   MAATVQQMVRSTVIVLGILAVLFGFMADNTKPVAGTPLLAGDGTRTCNFPHDPTTALRYP 60
           MA T+++M    VI+ G+++ + G + +N KP  G  +   D    CN+P DPT A  Y 
Sbjct: 1   MALTMKKM-SLIVIMFGVISFILGIVGENKKPPMGVIVKEKDAMM-CNYPSDPTVAFGYS 58

Query: 61  LTG--ISYCILRDWAPVYPYKGKVVPKRAMFKNRLFTGFFSLALFITGSATTMLLWPTIP 118
             G  ++   +   +  Y Y G  VP  A+ K    T F  LAL    ++     WPT+ 
Sbjct: 59  SLGFLVASSCMGLISLFYSYNGTSVPPSALLKYTTLTIFLVLALAEPPNSQGR-PWPTVT 117

Query: 119 QQVHLKNNVYH---DFSHECPPVKT 140
           +Q   K+N Y        +CP  KT
Sbjct: 118 EQYLWKSNSYSIRTSVKPDCPTAKT 142


>Medtr1g010180.1 | transmembrane protein, putative | HC |
           chr1:1792069-1792751 | 20130731
          Length = 124

 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 59/122 (48%), Gaps = 9/122 (7%)

Query: 47  CNFPHDPTTALRYPLTG--ISYCILRDWAPVYPYKGKVVPKRAMFKNRLFTGFFSLALFI 104
           CN+P DPT    Y   G  ++  ++   +  Y Y G  VP  A+FK    + FF +AL  
Sbjct: 3   CNYPSDPTVVFGYSSIGFLVASSLMGLISIFYSYNGTSVPPSALFKYTTLSVFFIIALAC 62

Query: 105 TGSATTMLLWPTIPQQVHLKN-----NVYHDFSHECPPVKTSDDLGVGVILIIDSFSIMV 159
           +  A  M LWPT+ +Q H ++     NV       CP  KT   +G G  L ++S S+  
Sbjct: 63  SALAGVMTLWPTVTEQHHWRHNFHPANVSASTMPACPTAKT-GLMGSGAFLCLNS-SLYF 120

Query: 160 GF 161
           GF
Sbjct: 121 GF 122