Miyakogusa Predicted Gene
- Lj3g3v2645610.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2645610.2 Non Characterized Hit- tr|I1HJX4|I1HJX4_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,56.25,2e-18,seg,NULL; BRX,Brevis radix-like domain; REGULATOR OF
CHROMOSOME CONDENSATION-RELATED,NULL; REGULATOR,CUFF.44326.2
(368 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g019620.2 | brevis radix-like protein | HC | chr8:6946947-... 637 0.0
Medtr8g019620.1 | brevis radix-like protein | HC | chr8:6946947-... 637 0.0
Medtr2g041170.1 | brevis radix-like protein | HC | chr2:18039563... 394 e-109
Medtr8g071220.1 | brevis radix-like protein | HC | chr8:30217921... 286 3e-77
Medtr5g026970.1 | brevis RADIX-like protein | HC | chr5:11177365... 216 3e-56
Medtr5g026970.2 | brevis RADIX-like protein | HC | chr5:11177292... 185 7e-47
Medtr5g089900.1 | regulator of chromosome condensation (RCC1) fa... 96 4e-20
Medtr6g034795.1 | chromosome condensation regulator RCC1 repeat ... 89 6e-18
Medtr1g099220.1 | chromosome condensation regulator RCC1 repeat ... 70 3e-12
Medtr3g064560.1 | regulator of chromosome condensation (RCC1) fa... 70 4e-12
Medtr7g072410.1 | regulator of chromosome condensation (RCC1) fa... 58 1e-08
Medtr4g029410.1 | regulator of chromosome condensation (RCC1) fa... 49 7e-06
>Medtr8g019620.2 | brevis radix-like protein | HC |
chr8:6946947-6951587 | 20130731
Length = 369
Score = 637 bits (1642), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/369 (84%), Positives = 329/369 (89%), Gaps = 1/369 (0%)
Query: 1 MLTCIACSKQLNNGSLQPEEEEEAVQTPSTKQAIKALTAQIKDMAVKASGAYXXXXXXXX 60
MLTCIACSKQLNNGSL +EE+EAVQTPSTKQAIKALTAQIKDMAVKASGAY
Sbjct: 1 MLTCIACSKQLNNGSLHQQEEDEAVQTPSTKQAIKALTAQIKDMAVKASGAYKNCKPCSG 60
Query: 61 XXXXXXXXXYADSDVGSDSARFHMAYHRTGSSNSTPRMWGKEMEARLKGLSSGEGTPASV 120
YADSD+GSDSARF+ AY RTGS++STPRMWGKEMEARLKG+SSGEGTP SV
Sbjct: 61 SSNGNKNKKYADSDMGSDSARFNWAYRRTGSASSTPRMWGKEMEARLKGISSGEGTPTSV 120
Query: 121 SGRTESVM-LTEEDEPREWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWW 179
SGRTESV+ + EEDEP+EW+AQVEPGVLITFVSLP+GGNDLKRIRFSREMFNKWQAQRWW
Sbjct: 121 SGRTESVVFMEEEDEPKEWVAQVEPGVLITFVSLPEGGNDLKRIRFSREMFNKWQAQRWW 180
Query: 180 AENYDKVMELYNVQRFDQNAVPLPTPPRSEDESSRIESARDSPATPPLSKERLPRHLHQP 239
AENYDKVMELYNVQRF+Q AVPLPTPPRSEDESS+IESARDSP TPPL+KERLPRHLH P
Sbjct: 181 AENYDKVMELYNVQRFNQEAVPLPTPPRSEDESSKIESARDSPVTPPLTKERLPRHLHHP 240
Query: 240 MGMGYSSSDSLDHHQRQPQPRYETSGLGSTPNLSTISVPKTERSSIEGSVRTSSSGEEDR 299
M MGYSSSDSLDHH QPQP YETSGL S NLS I VPKTERSSI+ SVRTSSS EED
Sbjct: 241 MTMGYSSSDSLDHHHMQPQPCYETSGLPSKSNLSNIGVPKTERSSIDASVRTSSSEEEDH 300
Query: 300 SGELSISNASEMETEWVEQDEPGVYITIRALPGGARELRRVRFSREKFGEVHARLWWEEN 359
SGELSISNAS+METEWVEQDEPGVYITIRALPGG RELRRVRFSREKFGE+HARLWWEEN
Sbjct: 301 SGELSISNASDMETEWVEQDEPGVYITIRALPGGTRELRRVRFSREKFGEMHARLWWEEN 360
Query: 360 RARIQEQYL 368
RARIQEQYL
Sbjct: 361 RARIQEQYL 369
>Medtr8g019620.1 | brevis radix-like protein | HC |
chr8:6946947-6951530 | 20130731
Length = 369
Score = 637 bits (1642), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/369 (84%), Positives = 329/369 (89%), Gaps = 1/369 (0%)
Query: 1 MLTCIACSKQLNNGSLQPEEEEEAVQTPSTKQAIKALTAQIKDMAVKASGAYXXXXXXXX 60
MLTCIACSKQLNNGSL +EE+EAVQTPSTKQAIKALTAQIKDMAVKASGAY
Sbjct: 1 MLTCIACSKQLNNGSLHQQEEDEAVQTPSTKQAIKALTAQIKDMAVKASGAYKNCKPCSG 60
Query: 61 XXXXXXXXXYADSDVGSDSARFHMAYHRTGSSNSTPRMWGKEMEARLKGLSSGEGTPASV 120
YADSD+GSDSARF+ AY RTGS++STPRMWGKEMEARLKG+SSGEGTP SV
Sbjct: 61 SSNGNKNKKYADSDMGSDSARFNWAYRRTGSASSTPRMWGKEMEARLKGISSGEGTPTSV 120
Query: 121 SGRTESVM-LTEEDEPREWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWW 179
SGRTESV+ + EEDEP+EW+AQVEPGVLITFVSLP+GGNDLKRIRFSREMFNKWQAQRWW
Sbjct: 121 SGRTESVVFMEEEDEPKEWVAQVEPGVLITFVSLPEGGNDLKRIRFSREMFNKWQAQRWW 180
Query: 180 AENYDKVMELYNVQRFDQNAVPLPTPPRSEDESSRIESARDSPATPPLSKERLPRHLHQP 239
AENYDKVMELYNVQRF+Q AVPLPTPPRSEDESS+IESARDSP TPPL+KERLPRHLH P
Sbjct: 181 AENYDKVMELYNVQRFNQEAVPLPTPPRSEDESSKIESARDSPVTPPLTKERLPRHLHHP 240
Query: 240 MGMGYSSSDSLDHHQRQPQPRYETSGLGSTPNLSTISVPKTERSSIEGSVRTSSSGEEDR 299
M MGYSSSDSLDHH QPQP YETSGL S NLS I VPKTERSSI+ SVRTSSS EED
Sbjct: 241 MTMGYSSSDSLDHHHMQPQPCYETSGLPSKSNLSNIGVPKTERSSIDASVRTSSSEEEDH 300
Query: 300 SGELSISNASEMETEWVEQDEPGVYITIRALPGGARELRRVRFSREKFGEVHARLWWEEN 359
SGELSISNAS+METEWVEQDEPGVYITIRALPGG RELRRVRFSREKFGE+HARLWWEEN
Sbjct: 301 SGELSISNASDMETEWVEQDEPGVYITIRALPGGTRELRRVRFSREKFGEMHARLWWEEN 360
Query: 360 RARIQEQYL 368
RARIQEQYL
Sbjct: 361 RARIQEQYL 369
>Medtr2g041170.1 | brevis radix-like protein | HC |
chr2:18039563-18048357 | 20130731
Length = 352
Score = 394 bits (1011), Expect = e-109, Method: Compositional matrix adjust.
Identities = 227/376 (60%), Positives = 279/376 (74%), Gaps = 32/376 (8%)
Query: 1 MLTCIACSKQLNNGSLQPEEEEEAVQTPSTKQAIKALTAQIKDMAVKASGAYXXXXXXXX 60
MLTCIA +P++ EE ++ + +++K+LT QIKDMA+KASG Y
Sbjct: 1 MLTCIA----------RPKKLEEDSESNNNAKSVKSLTCQIKDMALKASGVYKSCNPCTP 50
Query: 61 XXXXXXXXXYADSDVGSDSARFHMAYHRTGSSNSTPRMWGKEMEARLKGLSSGEGTPASV 120
++S+V SDS +F RT R WGKEMEARLKG+SSGEGTP+S
Sbjct: 51 ATRLRNGG--SESEV-SDSEKFR----RT-------RTWGKEMEARLKGISSGEGTPSSS 96
Query: 121 SGRTES-----VMLTEEDEPREWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQA 175
S V++ EE+E +EW+AQVEPGVLITFVSLP+GGNDLKRIRFSR++FNKWQA
Sbjct: 97 SSSFGGGSGRRVVVLEEEEGKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDIFNKWQA 156
Query: 176 QRWWAENYDKVMELYNVQRFDQNAVPLPTPPRSEDESSRIESARDSPATPPLSKERLPRH 235
QRWWAENYDKVMELYNVQR ++ A PLPTP RSEDESS+ ES DSP TPPL+KE+L R+
Sbjct: 157 QRWWAENYDKVMELYNVQRLNRQAFPLPTPARSEDESSKRESIADSPVTPPLTKEQLSRN 216
Query: 236 LHQP--MGMGYSSSDSLDHHQRQPQP-RYETSGLGSTPNLSTISVPKTERSSIEGSVRTS 292
L +P MGMGYSSSDS D H Q + +Y+ SG+ STP +STIS KT+ SS+ S+R+S
Sbjct: 217 LFRPTGMGMGYSSSDSYDQHSMQSKHYQYDLSGMNSTPKVSTISAAKTDISSVAASIRSS 276
Query: 293 SSGEEDRSGELSISNASEMETEWVEQDEPGVYITIRALPGGARELRRVRFSREKFGEVHA 352
SS E DRSG+LS+SNAS+ ++EWVE+DEPGVYITIR++PGG RE+RRVRFSREKFGE+HA
Sbjct: 277 SSREADRSGDLSMSNASDPDSEWVEEDEPGVYITIRSMPGGKREIRRVRFSREKFGEMHA 336
Query: 353 RLWWEENRARIQEQYL 368
RLWWEENRAR+ QYL
Sbjct: 337 RLWWEENRARVHAQYL 352
>Medtr8g071220.1 | brevis radix-like protein | HC |
chr8:30217921-30223478 | 20130731
Length = 333
Score = 286 bits (731), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 183/378 (48%), Positives = 221/378 (58%), Gaps = 55/378 (14%)
Query: 1 MLTCIACSKQLNNGSLQPEEEEEAVQTPSTKQAIKALTAQIKDMAVKASGAYXXXXXXXX 60
M TCIAC+K + + +E+ TPSTK+A+K+LT QIKDMA+K SGAY
Sbjct: 1 MFTCIACTK-----TDERDEDGRESGTPSTKEAVKSLTTQIKDMALKFSGAYKQCKPCTG 55
Query: 61 XXXXXXXXX---YADSDVGSDSARFHMAYHRTGSSNSTPRMWGKEMEARLKGLSSGEGTP 117
Y D D S+ + Y SS+STP W +G+ TP
Sbjct: 56 GSSSYNKKGHRPYPDFDTISEGVPY--PYIGGASSSSTP-AWDFTSSNYPGPRYAGDRTP 112
Query: 118 -ASVSGRTESVMLTEEDEPREWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQ 176
S V+L ++DEP+EW+AQVEPGV ITFVSLP GGNDLKRIRFSREMFNKWQAQ
Sbjct: 113 RGRDSASVCDVVLEDDDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFSREMFNKWQAQ 172
Query: 177 RWWAENYDKVMELYNVQRFDQNAVPLPTPPRSE-DES-----SRIESARDSPATPPLSKE 230
+WW ENYD++MELYNVQRF++ A L TP RSE DE SR+ SA +SP K+
Sbjct: 173 KWWGENYDRIMELYNVQRFNRQA--LNTPSRSEADEQRDSTYSRLTSAMESPMAS--VKD 228
Query: 231 RLPRHLHQPMGMGYSSSDSLDHHQRQPQPRYETSGLGSTPNLSTISVPKTERSSIEGSVR 290
PR ++P G +H Q SS+E S
Sbjct: 229 WTPRSHYKPSGA--FDQGGGNHFQGG--------------------------SSMEPSRA 260
Query: 291 TSSSGEEDRSGELSISNASEMETEWVEQDEPGVYITIRALPGGARELRRVRFSREKFGEV 350
T+SS +E SISNASEME+EWVEQDEPGVYITIR L G RELRRVRFSRE+FGEV
Sbjct: 261 TTSSRDEP-----SISNASEMESEWVEQDEPGVYITIRQLADGTRELRRVRFSRERFGEV 315
Query: 351 HARLWWEENRARIQEQYL 368
+A+ WWE+NR RIQ QYL
Sbjct: 316 NAKTWWEDNRERIQAQYL 333
>Medtr5g026970.1 | brevis RADIX-like protein | HC |
chr5:11177365-11173027 | 20130731
Length = 333
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 141/382 (36%), Positives = 207/382 (54%), Gaps = 64/382 (16%)
Query: 1 MLTCIACSKQLNNGSLQPEEEEEAVQ---TPSTKQAIKALTAQIKDMAVKASGAYXXXXX 57
ML CI C+KQ + E+ +E VQ TP+T++A K L+AQIKD+ +K G
Sbjct: 1 MLQCITCAKQTS------EDGDEQVQQRGTPTTREAPKNLSAQIKDIVLKFKGVCTKGST 54
Query: 58 XXXXXXXXXXXXYADSDVGSDSARFHMAYHRTGSS---NSTPRMWGKEMEARLKGLSSGE 114
A+S+V S+ +M GS+ + G + R G +SG
Sbjct: 55 SSYKRGLRSSA--ANSEVNSEVQCPYMGGVSLGSTPPWDLPVNFTGGRSDQRFIGGTSGN 112
Query: 115 GTPAS---VSGRTESVMLTEEDEPREWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFN 171
TP V E+V+ +E REW+A+VEPGV +TF+SLP GGNDLKRIRF+RE+F+
Sbjct: 113 QTPTVQEPVVAEPEAVV----EENREWVAEVEPGVDVTFLSLPDGGNDLKRIRFNREIFD 168
Query: 172 KWQAQRWWAENYDKVMELYNVQRFDQNAVPLPTPPRSEDESSRIESARDSPATPPLSKER 231
KWQA+ WW EN+D++ ELYNV+ F+ A+ P SEDE +R
Sbjct: 169 KWQARVWWGENFDRLRELYNVRSFNSQALSTALP--SEDE------------------QR 208
Query: 232 LPRHLHQPMGMG-----YSSSDSLDHHQRQPQPRYETSGLGSTPNLSTISVPKTERSSIE 286
+ G G + ++D + +Q P T G GS+ N ++
Sbjct: 209 EASYSMHETGSGSNVAAWENNDPMVGNQYF-NPSGFTMGEGSSSN-----------QNMH 256
Query: 287 GSVRTSSSGEEDRSGELSISNASEMETEWVEQDEPGVYITIRALPGGARELRRVRFSREK 346
++R+SS E +S SN+S+ ++EW+EQ EPG+++T+R P G ELRR++FSR++
Sbjct: 257 AALRSSSMNE------ISFSNSSDPDSEWIEQVEPGIFVTVRQYPDGNNELRRIKFSRQR 310
Query: 347 FGEVHARLWWEENRARIQEQYL 368
FG+ AR WW+ENR R++EQYL
Sbjct: 311 FGDAEARKWWDENRDRLREQYL 332
>Medtr5g026970.2 | brevis RADIX-like protein | HC |
chr5:11177292-11173029 | 20130731
Length = 255
Score = 185 bits (469), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 110/277 (39%), Positives = 160/277 (57%), Gaps = 50/277 (18%)
Query: 100 GKEMEARLKGLSSGEGTPAS---VSGRTESVMLTEEDEPREWIAQVEPGVLITFVSLPQG 156
G + R G +SG TP V E+V+ +E REW+A+VEPGV +TF+SLP G
Sbjct: 20 GGRSDQRFIGGTSGNQTPTVQEPVVAEPEAVV----EENREWVAEVEPGVDVTFLSLPDG 75
Query: 157 GNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFDQNAVPLPTPPRSEDESSRIE 216
GNDLKRIRF+RE+F+KWQA+ WW EN+D++ ELYNV+ F+ A+ P SEDE
Sbjct: 76 GNDLKRIRFNREIFDKWQARVWWGENFDRLRELYNVRSFNSQALSTALP--SEDE----- 128
Query: 217 SARDSPATPPLSKERLPRHLHQPMGMG-----YSSSDSLDHHQRQPQPRYETSGLGSTPN 271
+R + G G + ++D + +Q P T G GS+ N
Sbjct: 129 -------------QREASYSMHETGSGSNVAAWENNDPMVGNQYF-NPSGFTMGEGSSSN 174
Query: 272 LSTISVPKTERSSIEGSVRTSSSGEEDRSGELSISNASEMETEWVEQDEPGVYITIRALP 331
++ ++R+SS E +S SN+S+ ++EW+EQ EPG+++T+R P
Sbjct: 175 -----------QNMHAALRSSSMNE------ISFSNSSDPDSEWIEQVEPGIFVTVRQYP 217
Query: 332 GGARELRRVRFSREKFGEVHARLWWEENRARIQEQYL 368
G ELRR++FSR++FG+ AR WW+ENR R++EQYL
Sbjct: 218 DGNNELRRIKFSRQRFGDAEARKWWDENRDRLREQYL 254
>Medtr5g089900.1 | regulator of chromosome condensation (RCC1) family
protein | HC | chr5:39105074-39114126 | 20130731
Length = 1117
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 75/126 (59%), Gaps = 5/126 (3%)
Query: 242 MGYSSSDSLDHHQRQPQPRYETSGLGSTPNLSTISVPKTERSSIEGSVRTSSSGEEDRSG 301
+ +++ D L+ P+ S +T LS S + RS+ G + S S +R+G
Sbjct: 978 LSFAAIDRLNIQATSPEADLTGS---NTQLLSNGSSTVSNRST--GQNKQSQSDSTNRNG 1032
Query: 302 ELSISNASEMETEWVEQDEPGVYITIRALPGGARELRRVRFSREKFGEVHARLWWEENRA 361
+ + S ETEWVEQDEPGVYIT+ +LPGG +L+RVRFSR++F E A WW ENR
Sbjct: 1033 SRTKDSESRSETEWVEQDEPGVYITLTSLPGGVIDLKRVRFSRKRFSEKQAENWWAENRV 1092
Query: 362 RIQEQY 367
R+ EQY
Sbjct: 1093 RVYEQY 1098
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 98/197 (49%), Gaps = 37/197 (18%)
Query: 22 EEAVQTPSTKQAIKALTAQIKDMAVKASGAYXXXXXXXXXXXXXXXXXYADSDVGSDSAR 81
EE + + K+ IK+LTAQ+KDMA + + + GS+
Sbjct: 931 EETAKCKAAKEVIKSLTAQLKDMAERLP-----------VGTAKSVKSPSIASFGSNELS 979
Query: 82 FHMAYHRTGSSNSTPRMWGKEMEARLKG-----LSSGEGTPASVS------GRTESV--- 127
F A R ++P EA L G LS+G T ++ S +++S
Sbjct: 980 F-AAIDRLNIQATSP-------EADLTGSNTQLLSNGSSTVSNRSTGQNKQSQSDSTNRN 1031
Query: 128 -MLTEEDEPR---EWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENY 183
T++ E R EW+ Q EPGV IT SLP G DLKR+RFSR+ F++ QA+ WWAEN
Sbjct: 1032 GSRTKDSESRSETEWVEQDEPGVYITLTSLPGGVIDLKRVRFSRKRFSEKQAENWWAENR 1091
Query: 184 DKVMELYNVQRFDQNAV 200
+V E YNV+ D+++V
Sbjct: 1092 VRVYEQYNVRMVDKSSV 1108
>Medtr6g034795.1 | chromosome condensation regulator RCC1 repeat
protein | HC | chr6:12109737-12119303 | 20130731
Length = 1118
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 79/133 (59%), Gaps = 6/133 (4%)
Query: 235 HLHQPMGMGYSSSDSLDHHQRQPQPRYETSGLGSTPNLSTISVPKTERSSIEGSVRTSSS 294
+LHQ + G +S+ +H P + + G P+ S++S R S G+ R S
Sbjct: 966 NLHQQI-RGVVTSNGTSNH---PDVKLPSGGNVIQPSSSSLSDIVEGRDS--GNFRDDES 1019
Query: 295 GEEDRSGELSISNASEMETEWVEQDEPGVYITIRALPGGARELRRVRFSREKFGEVHARL 354
G + + L+ S+ ++++ EW+EQ EPGVYIT+ A+ G R+L+RVRFSR +FGE A
Sbjct: 1020 GVKSTNAALATSSNNQVDAEWIEQYEPGVYITLVAMHDGTRDLKRVRFSRRRFGENQAEN 1079
Query: 355 WWEENRARIQEQY 367
WW EN+ ++ E+Y
Sbjct: 1080 WWSENKDKVYEKY 1092
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 103/233 (44%), Gaps = 57/233 (24%)
Query: 22 EEAVQTPSTKQAIKALTAQIKDMAVK----ASGAYXXXXXXXXXXXXXXXXXYADSD--- 74
EE+ + + KQ IK+LTAQ+KD+A K A A Y D++
Sbjct: 871 EESTKCKAAKQVIKSLTAQLKDLAEKLPPEAYDAENIRPAYLPNGLESNGIHYPDTNGEQ 930
Query: 75 -------VGSDSARFHM---AYHRTGSSNSTPRMWGKEMEARLKGLSSGEGT-------- 116
GS A + ++RT + P +G + +++G+ + GT
Sbjct: 931 DLRAESISGSSLASIGLESSLFNRT--ARDLPGAYGTNLHQQIRGVVTSNGTSNHPDVKL 988
Query: 117 --------PAS------VSGR--------------TESVMLTEEDE--PREWIAQVEPGV 146
P+S V GR T + + T + EWI Q EPGV
Sbjct: 989 PSGGNVIQPSSSSLSDIVEGRDSGNFRDDESGVKSTNAALATSSNNQVDAEWIEQYEPGV 1048
Query: 147 LITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFDQNA 199
IT V++ G DLKR+RFSR F + QA+ WW+EN DKV E YNV+ D+++
Sbjct: 1049 YITLVAMHDGTRDLKRVRFSRRRFGENQAENWWSENKDKVYEKYNVRSVDKSS 1101
>Medtr1g099220.1 | chromosome condensation regulator RCC1 repeat
protein | HC | chr1:44778263-44766991 | 20130731
Length = 1121
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 267 GSTPNLSTISVPKTERSSIEGSVRTSSSGEEDRSGELSISNASEMETEWVEQDEPGVYIT 326
GS + SV T G+ R SG R+ L+ +N++++E EW+EQ EPGVYIT
Sbjct: 998 GSMIQATNSSVSDTFDGRNSGNFRDDESGSRSRNDVLA-ANSNQVEAEWIEQYEPGVYIT 1056
Query: 327 IRALPGGARELRRVRFSREKFGEVHARLWWEENRARIQEQY 367
+ A+ G R+LRRVRFSR +FGE A WW ENR R+ E+Y
Sbjct: 1057 LVAMRDGTRDLRRVRFSRRRFGENQAETWWSENRDRVYERY 1097
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 41/57 (71%)
Query: 137 EWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQ 193
EWI Q EPGV IT V++ G DL+R+RFSR F + QA+ WW+EN D+V E YNV+
Sbjct: 1044 EWIEQYEPGVYITLVAMRDGTRDLRRVRFSRRRFGENQAETWWSENRDRVYERYNVR 1100
>Medtr3g064560.1 | regulator of chromosome condensation (RCC1) family
protein | HC | chr3:29089374-29095433 | 20130731
Length = 1032
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 40/57 (70%)
Query: 311 METEWVEQDEPGVYITIRALPGGARELRRVRFSREKFGEVHARLWWEENRARIQEQY 367
++ EWVEQ E GVYIT+ P G + L+RVRFSR++F + A WWEEN+ ++ +Y
Sbjct: 971 LKVEWVEQYENGVYITLTKSPSGEKGLKRVRFSRKRFSQKEAERWWEENQTKVHHKY 1027
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 36/57 (63%)
Query: 137 EWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQ 193
EW+ Q E GV IT P G LKR+RFSR+ F++ +A+RWW EN KV Y ++
Sbjct: 974 EWVEQYENGVYITLTKSPSGEKGLKRVRFSRKRFSQKEAERWWEENQTKVHHKYEIE 1030
>Medtr7g072410.1 | regulator of chromosome condensation (RCC1) family
protein | HC | chr7:26894031-26888474 | 20130731
Length = 1108
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 283 SSIEGSVRTSSSGEEDRSGELSIS-NASEMETEWVEQDEPGVYITIRALPGGARELRRVR 341
SS R +S E+ S L+ S + E T+ V+Q EPGVY+T+ P G R + V+
Sbjct: 964 SSSNTEARVASQSSENDSRTLNPSRSVREGNTQVVDQFEPGVYVTLIVRPDGKRLFKSVK 1023
Query: 342 FSREKFGEVHARLWWEENRARIQEQY 367
FS+ KF E A WW N+ R+ +Y
Sbjct: 1024 FSKRKFREHQAEEWWTLNKDRVHARY 1049
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 10/96 (10%)
Query: 139 IAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFDQN 198
+ Q EPGV +T + P G K ++FS+ F + QA+ WW N D+V Y+ Q +
Sbjct: 998 VDQFEPGVYVTLIVRPDGKRLFKSVKFSKRKFREHQAEEWWTLNKDRVHARYSPQATNPE 1057
Query: 199 AVP----LPTPPRSEDESSRIESARDSPATPPLSKE 230
V P P ED + S+ +P PP ++E
Sbjct: 1058 NVASSSRTPPPANQED----VASSSSNP--PPANQE 1087
>Medtr4g029410.1 | regulator of chromosome condensation (RCC1) family
protein, putative | HC | chr4:10165501-10157053 |
20130731
Length = 1045
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 312 ETEWVEQDEPGVYITIRALPGGARELRRVRFSREKFGEVHARLWWEENRARIQEQYL 368
ET++ E+ + GVY + G + +RV+FS+ +F + A WW +N+ R+ +Y
Sbjct: 964 ETQFFEKFQSGVYALLTLRADGIKIFKRVKFSKRRFTDTQAEEWWRQNKGRVLRKYC 1020