Miyakogusa Predicted Gene

Lj3g3v2635570.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2635570.1 tr|Q7PWS6|Q7PWS6_ANOGA AGAP008869-PA OS=Anopheles
gambiae GN=AGAP008869 PE=4 SV=4,37.5,1e-18,seg,NULL; no
description,NULL; AAA,ATPase, AAA-type, core; CTF18, CHROMOSOME
TRANSMISSION FIDELITY F,CUFF.44322.1
         (351 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g047790.1 | chromosome transmission fidelity protein | HC ...   356   2e-98

>Medtr1g047790.1 | chromosome transmission fidelity protein | HC |
           chr1:18064972-18083135 | 20130731
          Length = 985

 Score =  356 bits (913), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 187/294 (63%), Positives = 219/294 (74%), Gaps = 20/294 (6%)

Query: 71  EKRAKVRVSL-EDSHSDDDEWLRFSPTPVPAEQPKSWKDGTLSRYASEIDGEFMPVTAPN 129
           EK  KVRV + ED+ +++++WLR  PT    E+ +  KD TLSR+ASEIDGE M VTAPN
Sbjct: 90  EKSEKVRVRVAEDAPAEEEDWLRPPPTSDTVEEVRFSKDKTLSRFASEIDGEVMTVTAPN 149

Query: 130 GDRVYAKLDRFLGDERATKLSCRENSSDLCLEPISNLFQKLEQETLDKTLQASLESQSVE 189
           GDRVY KLDR+ G++R  KL+CR +SSDL +EPIS L ++L+QE   KTL+AS ESQSV 
Sbjct: 150 GDRVYTKLDRYYGEDRVRKLNCRGDSSDLAVEPISVLLERLDQENFAKTLEASSESQSVV 209

Query: 190 DVTETQTVHEKLWVDKYAPKSFTELLSDEQTNREVLLWLKLWDSTVYGSEIRNTSDEVLS 249
           DV ET TVHEKLWVDKYAPKSFT+LLSDEQTNREVLLWLK WDSTV+GSEIR+TSD+VLS
Sbjct: 210 DVPETLTVHEKLWVDKYAPKSFTDLLSDEQTNREVLLWLKQWDSTVFGSEIRSTSDDVLS 269

Query: 250 ALKQHSSVTQNHKPLDSKFPR----------------KNRESK-WSSRS--YANSTSTDE 290
           ALK+HSS++   KPL S FPR                + R    WSS S  Y N  STDE
Sbjct: 270 ALKRHSSISHKPKPLASNFPRTKGGHNWSSNSSSNFSRTRGGHTWSSNSSRYTNFKSTDE 329

Query: 291 CDNSKTIQDAWNSKSRTIGPPEQKILLLCGPPGLGKTTLAHVAARHCGYDVLEV 344
             +S + QD  N+KSR  G PEQKILLLCGPPGLGKTTLAHVAARHCGY V+EV
Sbjct: 330 SGSSNSFQDTRNAKSRNTGAPEQKILLLCGPPGLGKTTLAHVAARHCGYHVVEV 383