Miyakogusa Predicted Gene

Lj3g3v2634540.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2634540.1 tr|Q5W796|Q5W796_ORYSJ Os05g0357600 protein
OS=Oryza sativa subsp. japonica GN=OJ1045_C06.7 PE=2
SV=,92.23,0,P-loop containing nucleoside triphosphate hydrolases,NULL;
TGS-like,TGS-like; GTP1_OBG,GTP1/OBG, con,CUFF.44325.1
         (399 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g020210.1 | developmentally regulated GTP-binding protein ...   736   0.0  
Medtr8g020210.2 | developmentally regulated GTP-binding protein ...   736   0.0  
Medtr3g094880.1 | developmentally regulated GTP-binding protein ...   416   e-116
Medtr2g019790.1 | Obg family GTPase CgtA | HC | chr2:6528744-652...    66   7e-11
Medtr2g019790.2 | Obg family GTPase CgtA | HC | chr2:6528707-652...    66   7e-11
Medtr1g023160.1 | GTP-binding protein Obg2, putative | HC | chr1...    59   1e-08
Medtr1g073010.1 | Obg family GTPase CgtA | HC | chr1:32424577-32...    58   2e-08

>Medtr8g020210.1 | developmentally regulated GTP-binding protein |
           HC | chr8:7102535-7108906 | 20130731
          Length = 399

 Score =  736 bits (1901), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/398 (91%), Positives = 377/398 (94%)

Query: 1   MGIIERIKEIEAEMARTQKNKATEYHLGQLKAKIAKLRTQXXXXXXXXXXXXXXFEVTKF 60
           MGIIE+IKEIEAEMARTQKNKATEYHLGQLKAKIAKLRTQ              FEVTKF
Sbjct: 1   MGIIEKIKEIEAEMARTQKNKATEYHLGQLKAKIAKLRTQLLEPPKGSSGGGDGFEVTKF 60

Query: 61  GHGRVALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIHYNDTKIQLLDLPGII 120
           GHGRV+LIGFPSVGKSTLLT+LTGTHSEAASYEFTTLTCIPGIIHYNDTKIQLLDLPGII
Sbjct: 61  GHGRVSLIGFPSVGKSTLLTLLTGTHSEAASYEFTTLTCIPGIIHYNDTKIQLLDLPGII 120

Query: 121 EGASEGKGRGRQVIAVAKSSDIVLMVLDASKSEGHRQILTKELEAVGLRLNQRPPQIYFK 180
           EGASEGKGRGRQVIAVAKSSDIVLMVLDASKSEGHRQILTKELEAVGLRLN+RPPQIYFK
Sbjct: 121 EGASEGKGRGRQVIAVAKSSDIVLMVLDASKSEGHRQILTKELEAVGLRLNKRPPQIYFK 180

Query: 181 KKKTGGISFNSTMPLTHVDEKLCYQILHEYKIHNAEILFREDATVDDLIDVIEGNRKYMK 240
           KKKTGGISFNSTMPLTHVDEKLCYQILHEYKIHNAEILFREDATVDD IDVIEGNRKYMK
Sbjct: 181 KKKTGGISFNSTMPLTHVDEKLCYQILHEYKIHNAEILFREDATVDDFIDVIEGNRKYMK 240

Query: 241 CVYVYNKIDVVGIDDVDRLARQPNSVVISCNLKLNLDRLLSRMWDEMGLVRVYTKPQGQQ 300
           CVYVYNKIDVVGIDDVDRL+RQPNS+VISCNLKLNLDRLL+RMWDEMGLVRVYTKPQGQQ
Sbjct: 241 CVYVYNKIDVVGIDDVDRLSRQPNSIVISCNLKLNLDRLLARMWDEMGLVRVYTKPQGQQ 300

Query: 301 PDFAEPVVLSADRGGCTVEDFCNHIHRSLVKDVKYVLVWGTSARHYPQHCGLAHYLNDED 360
           PDF +PVVLSADRGG +VEDFCNHIHRSLVKDVKYVLVWGTSARHYPQHCGL+H L DED
Sbjct: 301 PDFGDPVVLSADRGGSSVEDFCNHIHRSLVKDVKYVLVWGTSARHYPQHCGLSHVLCDED 360

Query: 361 VVQIVKKKERDEGGRGRFKSHSNAPARISDREKKAPLK 398
           VVQIVKKKE DEGGRGRFKSHS+APARI DR+KKAPLK
Sbjct: 361 VVQIVKKKETDEGGRGRFKSHSDAPARICDRQKKAPLK 398


>Medtr8g020210.2 | developmentally regulated GTP-binding protein |
           HC | chr8:7102535-7108906 | 20130731
          Length = 399

 Score =  736 bits (1901), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/398 (91%), Positives = 377/398 (94%)

Query: 1   MGIIERIKEIEAEMARTQKNKATEYHLGQLKAKIAKLRTQXXXXXXXXXXXXXXFEVTKF 60
           MGIIE+IKEIEAEMARTQKNKATEYHLGQLKAKIAKLRTQ              FEVTKF
Sbjct: 1   MGIIEKIKEIEAEMARTQKNKATEYHLGQLKAKIAKLRTQLLEPPKGSSGGGDGFEVTKF 60

Query: 61  GHGRVALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIHYNDTKIQLLDLPGII 120
           GHGRV+LIGFPSVGKSTLLT+LTGTHSEAASYEFTTLTCIPGIIHYNDTKIQLLDLPGII
Sbjct: 61  GHGRVSLIGFPSVGKSTLLTLLTGTHSEAASYEFTTLTCIPGIIHYNDTKIQLLDLPGII 120

Query: 121 EGASEGKGRGRQVIAVAKSSDIVLMVLDASKSEGHRQILTKELEAVGLRLNQRPPQIYFK 180
           EGASEGKGRGRQVIAVAKSSDIVLMVLDASKSEGHRQILTKELEAVGLRLN+RPPQIYFK
Sbjct: 121 EGASEGKGRGRQVIAVAKSSDIVLMVLDASKSEGHRQILTKELEAVGLRLNKRPPQIYFK 180

Query: 181 KKKTGGISFNSTMPLTHVDEKLCYQILHEYKIHNAEILFREDATVDDLIDVIEGNRKYMK 240
           KKKTGGISFNSTMPLTHVDEKLCYQILHEYKIHNAEILFREDATVDD IDVIEGNRKYMK
Sbjct: 181 KKKTGGISFNSTMPLTHVDEKLCYQILHEYKIHNAEILFREDATVDDFIDVIEGNRKYMK 240

Query: 241 CVYVYNKIDVVGIDDVDRLARQPNSVVISCNLKLNLDRLLSRMWDEMGLVRVYTKPQGQQ 300
           CVYVYNKIDVVGIDDVDRL+RQPNS+VISCNLKLNLDRLL+RMWDEMGLVRVYTKPQGQQ
Sbjct: 241 CVYVYNKIDVVGIDDVDRLSRQPNSIVISCNLKLNLDRLLARMWDEMGLVRVYTKPQGQQ 300

Query: 301 PDFAEPVVLSADRGGCTVEDFCNHIHRSLVKDVKYVLVWGTSARHYPQHCGLAHYLNDED 360
           PDF +PVVLSADRGG +VEDFCNHIHRSLVKDVKYVLVWGTSARHYPQHCGL+H L DED
Sbjct: 301 PDFGDPVVLSADRGGSSVEDFCNHIHRSLVKDVKYVLVWGTSARHYPQHCGLSHVLCDED 360

Query: 361 VVQIVKKKERDEGGRGRFKSHSNAPARISDREKKAPLK 398
           VVQIVKKKE DEGGRGRFKSHS+APARI DR+KKAPLK
Sbjct: 361 VVQIVKKKETDEGGRGRFKSHSDAPARICDRQKKAPLK 398


>Medtr3g094880.1 | developmentally regulated GTP-binding protein |
           HC | chr3:43301025-43311806 | 20130731
          Length = 368

 Score =  416 bits (1069), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 202/366 (55%), Positives = 266/366 (72%), Gaps = 3/366 (0%)

Query: 3   IIERIKEIEAEMARTQKNKATEYHLGQLKAKIAKLRTQXXX-XXXXXXXXXXXFEVTKFG 61
           ++++IK+IE EMA+TQKNKAT +HLG LKAK+AKLR +               F+VTK G
Sbjct: 4   VMQKIKDIEDEMAKTQKNKATAHHLGLLKAKLAKLRRELLTPTTKGGGGAGEGFDVTKSG 63

Query: 62  HGRVALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIHYNDTKIQLLDLPGIIE 121
             RV L+GFPSVGKSTLL  LTGT SE ASYEFTTLTCIPG+I Y   KIQLLDLPGIIE
Sbjct: 64  DARVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPGIIE 123

Query: 122 GASEGKGRGRQVIAVAKSSDIVLMVLDASKSEGHRQILTKELEAVGLRLNQRPPQIYFKK 181
           GA +GKGRGRQVI+ A++ + +L+VLDA K   H++++ KELE  G+RLN+ PP + F++
Sbjct: 124 GAKDGKGRGRQVISTARTCNCILIVLDAIKPITHKRLIEKELEGFGIRLNKEPPNLTFRR 183

Query: 182 KKTGGISFNSTMPLTHVDEKLCYQILHEYKIHNAEILFREDATVDDLIDVIEGNRKYMKC 241
           K+ GGI+F ST   TH+D      I  EY+IHNA+I  R DAT DDLIDVIEG+R Y  C
Sbjct: 184 KEKGGINFTSTATNTHLDLDTVKAICSEYRIHNADITLRYDATADDLIDVIEGSRVYTPC 243

Query: 242 VYVYNKIDVVGIDDVDRLARQPNSVVISCNLKLNLDRLLSRMWDEMGLVRVYTKPQGQQP 301
           +YV NKID + +++++ L + P+   +S +L+ NLD LL ++W+ + L R+YTKP+G  P
Sbjct: 244 IYVVNKIDQITLEELEILDKLPHYCPVSAHLEWNLDGLLDKVWEYLNLTRIYTKPKGMNP 303

Query: 302 DFAEPVVLSADRGGCTVEDFCNHIHRSLVKDVKYVLVWGTSARHYPQHCGLAHYLNDEDV 361
           D+ +PV+LS+ +   TVEDFC+ IH+ ++K  KY LVWG+SA+H PQ  G  H L DEDV
Sbjct: 304 DYEDPVILSSKKK--TVEDFCDRIHKDMLKQFKYALVWGSSAKHKPQRVGKEHELEDEDV 361

Query: 362 VQIVKK 367
           VQI+KK
Sbjct: 362 VQIIKK 367


>Medtr2g019790.1 | Obg family GTPase CgtA | HC |
           chr2:6528744-6523643 | 20130731
          Length = 617

 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 64/114 (56%), Gaps = 6/114 (5%)

Query: 65  VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIHYN-DTKIQLLDLPGIIEGA 123
           V ++G P+ GKSTLL++++    E A+Y FTTL    G++ ++ D+ + + DLPG++EGA
Sbjct: 321 VGIVGAPNAGKSTLLSVVSAAKPEVANYPFTTLLPNLGVVSFDYDSTMVVADLPGLLEGA 380

Query: 124 SEGKGRGRQVIAVAKSSDIVLMVLDASKSEGHRQILTKELEAVGLRLNQRPPQI 177
             G G G + +   +    ++ V+D S  +        E +AV L L    P++
Sbjct: 381 HRGFGLGHEFLRHTERCSALIHVVDGSSPQPDL-----EFDAVRLELKLFNPEL 429


>Medtr2g019790.2 | Obg family GTPase CgtA | HC |
           chr2:6528707-6523643 | 20130731
          Length = 617

 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 64/114 (56%), Gaps = 6/114 (5%)

Query: 65  VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIHYN-DTKIQLLDLPGIIEGA 123
           V ++G P+ GKSTLL++++    E A+Y FTTL    G++ ++ D+ + + DLPG++EGA
Sbjct: 321 VGIVGAPNAGKSTLLSVVSAAKPEVANYPFTTLLPNLGVVSFDYDSTMVVADLPGLLEGA 380

Query: 124 SEGKGRGRQVIAVAKSSDIVLMVLDASKSEGHRQILTKELEAVGLRLNQRPPQI 177
             G G G + +   +    ++ V+D S  +        E +AV L L    P++
Sbjct: 381 HRGFGLGHEFLRHTERCSALIHVVDGSSPQPDL-----EFDAVRLELKLFNPEL 429


>Medtr1g023160.1 | GTP-binding protein Obg2, putative | HC |
           chr1:7356764-7361982 | 20130731
          Length = 496

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 8/94 (8%)

Query: 65  VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIHYN--------DTKIQLLDL 116
           V LIG P+ GKSTLL  +T    + A Y FTTL    G +  +         ++  L DL
Sbjct: 272 VGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLDGDPNLGAGMYSSEATLADL 331

Query: 117 PGIIEGASEGKGRGRQVIAVAKSSDIVLMVLDAS 150
           PG+IEGA  GKG GR  +   + + +++ V+DAS
Sbjct: 332 PGLIEGAHLGKGLGRNFLRHLRRTRLLVHVVDAS 365


>Medtr1g073010.1 | Obg family GTPase CgtA | HC |
           chr1:32424577-32421281 | 20130731
          Length = 512

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 9/126 (7%)

Query: 65  VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIHYNDTKIQLLDLPGIIEGAS 124
           V+ +G P+ GKSTLL  ++        Y FTTL    G ++Y+D  I + D+PG+I+GA 
Sbjct: 327 VSFVGMPNAGKSTLLGAISRAKPAVGHYAFTTLRPNLGNLNYDDMSIIVADIPGLIKGAH 386

Query: 125 EGKGRGRQVIAVAKSSDIVLMVLD-ASKSEGHRQI--------LTKELEAVGLRLNQRPP 175
           + +G G   +   + + ++  V+D A+   G + I        L  ELE     L+ RP 
Sbjct: 387 QNRGLGHAFLRHIERTKVLAYVVDVAAALPGRKGISPWEQLKDLVLELEYHLEGLSNRPS 446

Query: 176 QIYFKK 181
            I   K
Sbjct: 447 LIVANK 452