Miyakogusa Predicted Gene

Lj3g3v2634530.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2634530.1 Non Characterized Hit- tr|A3AJ03|A3AJ03_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,62.16,7e-18,DUF1313,Protein of unknown function
DUF1313,CUFF.44318.1
         (114 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g020200.2 | early flowering protein | HC | chr8:7113610-71...   206   5e-54
Medtr8g020200.1 | early flowering protein | HC | chr8:7113056-71...   206   5e-54
Medtr2g041310.1 | early flowering protein | HC | chr2:18122682-1...   163   3e-41
Medtr4g125590.1 | early flowering protein | HC | chr4:52099665-5...   162   8e-41
Medtr3g070490.1 | early flowering protein | HC | chr3:31630253-3...    79   7e-16

>Medtr8g020200.2 | early flowering protein | HC |
           chr8:7113610-7111651 | 20130731
          Length = 114

 Score =  206 bits (523), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 101/113 (89%), Positives = 111/113 (98%)

Query: 1   MDGDIFGELGNTSQVDSRVMQVFQKSLLQAQDILNQNRVLINEINQNHESKMPDNLSRNV 60
           M+GDIFGELG+TSQVDSRV+ VFQKSL+QAQDILNQNR+LIN+INQNHES++PDNLSRNV
Sbjct: 1   MEGDIFGELGDTSQVDSRVLHVFQKSLVQAQDILNQNRLLINQINQNHESRIPDNLSRNV 60

Query: 61  GLIKELNSNIRRVVDLYADISSSFTKSQEASSEGDSSGTLKSDGKVNQKRIRS 113
            LIKELNSNIRRVVDLYAD+SSSFTKS+EASSEGDSSGTLKSDGKVNQKRIRS
Sbjct: 61  SLIKELNSNIRRVVDLYADLSSSFTKSREASSEGDSSGTLKSDGKVNQKRIRS 113


>Medtr8g020200.1 | early flowering protein | HC |
           chr8:7113056-7111741 | 20130731
          Length = 114

 Score =  206 bits (523), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 101/113 (89%), Positives = 111/113 (98%)

Query: 1   MDGDIFGELGNTSQVDSRVMQVFQKSLLQAQDILNQNRVLINEINQNHESKMPDNLSRNV 60
           M+GDIFGELG+TSQVDSRV+ VFQKSL+QAQDILNQNR+LIN+INQNHES++PDNLSRNV
Sbjct: 1   MEGDIFGELGDTSQVDSRVLHVFQKSLVQAQDILNQNRLLINQINQNHESRIPDNLSRNV 60

Query: 61  GLIKELNSNIRRVVDLYADISSSFTKSQEASSEGDSSGTLKSDGKVNQKRIRS 113
            LIKELNSNIRRVVDLYAD+SSSFTKS+EASSEGDSSGTLKSDGKVNQKRIRS
Sbjct: 61  SLIKELNSNIRRVVDLYADLSSSFTKSREASSEGDSSGTLKSDGKVNQKRIRS 113


>Medtr2g041310.1 | early flowering protein | HC |
           chr2:18122682-18125003 | 20130731
          Length = 114

 Score =  163 bits (412), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 78/112 (69%), Positives = 96/112 (85%)

Query: 1   MDGDIFGELGNTSQVDSRVMQVFQKSLLQAQDILNQNRVLINEINQNHESKMPDNLSRNV 60
           M+ D F  +GN +Q+D++++  FQKS +Q Q+IL+QNR+LINEINQNHESK+PDNLSRNV
Sbjct: 1   MEDDTFSGIGNGTQIDTKILGTFQKSFVQVQNILDQNRLLINEINQNHESKIPDNLSRNV 60

Query: 61  GLIKELNSNIRRVVDLYADISSSFTKSQEASSEGDSSGTLKSDGKVNQKRIR 112
           GLIKELN+NIRRVVDLYAD+SSSFTKS + +SEGDSSG +KSDGK   KR R
Sbjct: 61  GLIKELNNNIRRVVDLYADLSSSFTKSMDVTSEGDSSGAVKSDGKGGHKRHR 112


>Medtr4g125590.1 | early flowering protein | HC |
           chr4:52099665-52102501 | 20130731
          Length = 115

 Score =  162 bits (409), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 78/113 (69%), Positives = 97/113 (85%), Gaps = 1/113 (0%)

Query: 1   MDGDIFGELGN-TSQVDSRVMQVFQKSLLQAQDILNQNRVLINEINQNHESKMPDNLSRN 59
           M+GD +  LGN T Q+D +++Q FQK  +Q Q+IL+QNRVLINEINQNHES++PDNL++N
Sbjct: 1   MEGDTYSTLGNGTQQIDGKILQTFQKRFVQVQNILDQNRVLINEINQNHESRVPDNLNKN 60

Query: 60  VGLIKELNSNIRRVVDLYADISSSFTKSQEASSEGDSSGTLKSDGKVNQKRIR 112
           VGLIKELNSNIRRVVDLYAD+S+SFTKS + SSEGDSSG +KS+GK + KR R
Sbjct: 61  VGLIKELNSNIRRVVDLYADLSTSFTKSNDVSSEGDSSGAVKSEGKSSHKRHR 113


>Medtr3g070490.1 | early flowering protein | HC |
           chr3:31630253-31631053 | 20130731
          Length = 130

 Score = 79.3 bits (194), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 54/80 (67%)

Query: 6   FGELGNTSQVDSRVMQVFQKSLLQAQDILNQNRVLINEINQNHESKMPDNLSRNVGLIKE 65
           + ++ +    D    Q   KS  Q Q +L++NR +I ++N+N +S+MPDN+ +NVGLI+E
Sbjct: 36  YSDVEDAEDGDPEAWQTLNKSFRQVQSVLDRNRAIIQQVNENQQSRMPDNMVKNVGLIQE 95

Query: 66  LNSNIRRVVDLYADISSSFT 85
           LN NI +V  LY+D++S FT
Sbjct: 96  LNGNISKVASLYSDLNSDFT 115