Miyakogusa Predicted Gene
- Lj3g3v2612450.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2612450.1 Non Characterized Hit- tr|C5X8R2|C5X8R2_SORBI
Putative uncharacterized protein Sb02g002080
OS=Sorghu,35.14,0.00005,seg,NULL; AP2,AP2/ERF domain; AP2_ERF,AP2/ERF
domain; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NUL,CUFF.44312.1
(264 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g020510.1 | AP2 domain transcription factor | HC | chr8:72... 338 3e-93
Medtr1g017400.1 | AP2-like ethylene-responsive transcription fac... 140 1e-33
Medtr3g103460.1 | AP2-like ethylene-responsive transcription fac... 130 1e-30
Medtr7g080460.1 | AP2-like ethylene-responsive transcription fac... 105 5e-23
Medtr4g127930.1 | AP2-like ethylene-responsive transcription fac... 102 4e-22
Medtr2g098180.1 | AP2-like ethylene-responsive transcription fac... 102 5e-22
Medtr4g065370.1 | AP2-like ethylene-responsive transcription fac... 100 2e-21
Medtr5g031880.1 | AP2-like ethylene-responsive transcription fac... 99 4e-21
Medtr5g015070.1 | AP2 domain transcription factor, putative | HC... 90 2e-18
Medtr8g068510.1 | AP2-like ethylene-responsive transcription fac... 80 1e-15
Medtr2g460730.1 | AP2-type transcription factor | HC | chr2:2504... 70 2e-12
Medtr4g130270.1 | AP2-like ethylene-responsive transcription fac... 70 3e-12
Medtr4g007770.1 | AP2-type transcription factor | HC | chr4:1228... 68 9e-12
Medtr7g091390.1 | AP2-like ethylene-responsive transcription fac... 63 2e-10
Medtr8g468920.1 | AP2-like ethylene-responsive transcription fac... 62 6e-10
Medtr8g044040.1 | AP2 domain transcription factor | HC | chr8:16... 57 2e-08
Medtr8g044070.1 | AP2 domain transcription factor | HC | chr8:16... 57 2e-08
Medtr7g009410.1 | AP2 domain transcription factor | HC | chr7:20... 56 3e-08
Medtr6g011490.1 | AP2 domain transcription factor | HC | chr6:32... 51 1e-06
>Medtr8g020510.1 | AP2 domain transcription factor | HC |
chr8:7209112-7212535 | 20130731
Length = 574
Score = 338 bits (867), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 192/298 (64%), Positives = 208/298 (69%), Gaps = 49/298 (16%)
Query: 1 MSNWLGFSLTPHLRIDEEFGRENQDHXXXXXXXXX----------------HLSSMPLRS 44
MSNWLGFSLTPHLRIDEEFG ENQ+ HLS MPLRS
Sbjct: 1 MSNWLGFSLTPHLRIDEEFGTENQNQNQNHVAEGSEIGRNYVTPSSHPHPHHLSIMPLRS 60
Query: 45 DGSLCVSAA--PEEWRYENAITGGNSNDEGPKLEDFLGCYSNSSSLTETKVFCHDQNQNQ 102
DGSLCVS + P+EWRYENAIT GNSN+EGPKLEDFLGCYSN QNQN
Sbjct: 61 DGSLCVSDSFTPQEWRYENAITDGNSNEEGPKLEDFLGCYSN-------------QNQNS 107
Query: 103 T------KINVNVPPGFCTNST-EIETGENLTNPSSLYHSFHAYNE----NPHGLIPSNS 151
T KINVNV P FCTN+ EI+T ENLTN SL HSFHAYN+ N H LI NS
Sbjct: 108 TTTSTMSKINVNVSPSFCTNNNPEIDTRENLTN-QSLIHSFHAYNDHSNNNHHALIHDNS 166
Query: 152 IYNKPWLGQTQFADVKSSPGANGCNYQSLNLTMSPTVPNGV-----GAISTVQVNEDNRK 206
+Y K W+ QTQF+ + ++G +QSLNLTMSP V NGV AIS VQVNED RK
Sbjct: 167 MY-KSWMTQTQFSSEGKTTSSDGNGFQSLNLTMSPCVQNGVGGGVGSAISNVQVNEDPRK 225
Query: 207 RSIAKSQAREPVPRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGR 264
RS++KS AREPVPRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGR
Sbjct: 226 RSLSKSNAREPVPRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGR 283
>Medtr1g017400.1 | AP2-like ethylene-responsive transcription factor
| HC | chr1:4848969-4844540 | 20130731
Length = 660
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/267 (38%), Positives = 137/267 (51%), Gaps = 55/267 (20%)
Query: 37 LSSMPLRSDGSLCVSAAPEEWRYENAITGGNSN----DEGPKLEDFLGCYSNSSSLTETK 92
L MPL+SDGSLC+ E A+T S PKLEDFLG + T
Sbjct: 97 LPMMPLKSDGSLCI--------MEEALTRSQSQVMMPTSSPKLEDFLG-----GATMGTH 143
Query: 93 VFCHDQNQNQTKINVNVPPGFCTNSTEIETGENLTNPSSLYHSFHAYNENPHGL------ 146
++ ++ +T +++ + N+ + ET SSL HS + + HG+
Sbjct: 144 NHEYEGHERETMALLSLDSIYYNNNADHETNRE---HSSLDHSSYFSGFSCHGMYQNPLM 200
Query: 147 ----IPSNSIYN-------KPWLGQTQFADVKSSPGA----------NGC-NYQSLNLTM 184
SIY+ + + + V +S G+ NGC Q+L+L+M
Sbjct: 201 EEEQTKEESIYSFKNFVAPRDYSMEQHHHQVNNSVGSIGDDGSVGTVNGCGELQTLSLSM 260
Query: 185 SP-------TVPNGVGAISTVQVNEDNRKRSIAKSQAREPVPRKSIDTFGQRTSQYRGVT 237
SP TVPN + A T V + +KR AK ++P RK+I TFGQRTSQYRGVT
Sbjct: 261 SPGSQSSCVTVPNQISASGTDSVVVEAKKRGHAKVGQKQPAHRKTISTFGQRTSQYRGVT 320
Query: 238 RHRWTGRYEAHLWDNSCRKEGQTRKGR 264
RHRWTGRYEAHLWDNSC+KEGQTRKGR
Sbjct: 321 RHRWTGRYEAHLWDNSCKKEGQTRKGR 347
>Medtr3g103460.1 | AP2-like ethylene-responsive transcription factor
| HC | chr3:47751102-47755318 | 20130731
Length = 658
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 128/267 (47%), Gaps = 44/267 (16%)
Query: 37 LSSMPLRSDGSLCVSAAPEEWRYENAITGGNSNDEGPKLEDF-----LGCYSNSSSLTET 91
L+ MP++SDGSLC+ A R ++ + +S+ PKLEDF +G S +E
Sbjct: 84 LTVMPIKSDGSLCIMEALG--RSQSQVMVPSSS---PKLEDFLGGATMGSDEYGSHESEA 138
Query: 92 KVFCHD-------QNQNQTKINVNVPPGFCTNSTEIETGENLTNPSSLYHSFHA-----Y 139
D QN + + N + + S +T + F A
Sbjct: 139 MALSLDSIYYNNQQNADPHQANRDHSLDLLSESFRQQTSHPYYAALGFHGLFQAPLEVES 198
Query: 140 NENPHGLIPSNSIYNKPWLGQTQFADVK---------------SSPGANGCNYQSLNLTM 184
EN + + S S + W +Q + + QSL+L+M
Sbjct: 199 KENINHVDVSTSQMPQNWYPASQALEQQMGNHNGGVGVGGSSTVVGSVESGELQSLSLSM 258
Query: 185 SP-------TVPNGVGAISTVQVNEDNRKRSIAKSQAREPVPRKSIDTFGQRTSQYRGVT 237
SP TVP + T V + +KR AK ++P+ RKSIDTFGQRTSQYRGVT
Sbjct: 259 SPGSQSSCVTVPRQISPTGTESVTMEAKKRGAAKLGQKQPIHRKSIDTFGQRTSQYRGVT 318
Query: 238 RHRWTGRYEAHLWDNSCRKEGQTRKGR 264
RHRWTGRYEAHLWDNSC+KEGQTRKGR
Sbjct: 319 RHRWTGRYEAHLWDNSCKKEGQTRKGR 345
>Medtr7g080460.1 | AP2-like ethylene-responsive transcription factor
| HC | chr7:30621534-30617123 | 20130731
Length = 689
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 55/68 (80%), Gaps = 4/68 (5%)
Query: 197 TVQVNEDNRKRSIAKSQAREPVPRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRK 256
T V D+ + S+ +S VPRKS+DTFGQRTS YRGVTRHRWTGRYEAHLWDNSCR+
Sbjct: 231 TTAVVLDSNQTSVVES----AVPRKSVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRR 286
Query: 257 EGQTRKGR 264
EGQTRKGR
Sbjct: 287 EGQTRKGR 294
>Medtr4g127930.1 | AP2-like ethylene-responsive transcription factor
| HC | chr4:53237003-53232820 | 20130731
Length = 512
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 42/53 (79%), Positives = 50/53 (94%)
Query: 212 SQAREPVPRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGR 264
S+ ++P P+K++DTFGQRTS YRGVTRHRWTGRYEAHLWDNSCR+EGQ+RKGR
Sbjct: 142 SEPQKPSPKKTVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGR 194
>Medtr2g098180.1 | AP2-like ethylene-responsive transcription factor
| HC | chr2:41966348-41962851 | 20130731
Length = 525
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 126/274 (45%), Gaps = 88/274 (32%)
Query: 3 NWLGF--------SLTPHLRIDEEFGRENQDHXXXXXXXXXHLSSMPLRSDGSLCVSAAP 54
NWL F SL PHL+ NQ H H S L +D L
Sbjct: 5 NWLSFPLSPTHHPSLPPHLQ-------PNQSHH--------HFSLGTLVNDNMLQNPFQN 49
Query: 55 EEWRYENAITGGNSNDEGPKLEDFLGCYSNSSSLTETKVFCHDQ----NQNQTKINVNVP 110
+W N + ++++E PK+ DFLG S+ S+ E+ + +++ N + + +P
Sbjct: 50 HDW---NLMNSSHNSNEVPKVADFLGV-SSKSTENESDLAAYNEMNSSNHHSLDNYLFMP 105
Query: 111 PGFCTNSTEIETGENLTNPSSLYHSFHAYNENPHGLIPSNSIYNKPWLGQTQFADVKSSP 170
P NS+ + +++ Y ENP+
Sbjct: 106 P--VQNSSATSS-----------NNYDQYEENPNN------------------------- 127
Query: 171 GANGCNYQSLNLTMSPTVPNGVGAISTVQVNEDNRKRSIAKSQAREPVPRKSIDTFGQRT 230
N QSL L+M G+ +T DN +I ++ A PR+++DTFGQRT
Sbjct: 128 -----NLQSLTLSM--------GSGTTKDSTCDN---NIVEAAA---TPRRALDTFGQRT 168
Query: 231 SQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGR 264
S YRGVTRHRWTGRYEAHLWDN+CR+EGQ+RKGR
Sbjct: 169 SIYRGVTRHRWTGRYEAHLWDNTCRREGQSRKGR 202
>Medtr4g065370.1 | AP2-like ethylene-responsive transcription factor
| HC | chr4:24564307-24560917 | 20130731
Length = 546
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 65/93 (69%), Gaps = 11/93 (11%)
Query: 172 ANGCNYQSLNLTMSPTVPNGVGAISTVQVNEDNRKRSIAKSQAREPVPRKSIDTFGQRTS 231
A+ N QSL L+M G G ST + + +N ++ + VP+++ +TFGQRTS
Sbjct: 117 ASNSNLQSLTLSM------GSGKDSTCETSGENSTNTVEVA-----VPKRTSETFGQRTS 165
Query: 232 QYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGR 264
YRGVT+HRWTGRYEAHLWDNSCR+EGQ+RKGR
Sbjct: 166 IYRGVTKHRWTGRYEAHLWDNSCRREGQSRKGR 198
>Medtr5g031880.1 | AP2-like ethylene-responsive transcription factor
| HC | chr5:13684967-13680655 | 20130731
Length = 514
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%), Gaps = 3/76 (3%)
Query: 189 PNGVGAISTVQVNEDNRKRSIAKSQAREPVPRKSIDTFGQRTSQYRGVTRHRWTGRYEAH 248
NG ++ Q +E+N ++A A +K +DTFGQRTS YRGVTRHRWTGRYEAH
Sbjct: 187 ANGTLSLGVAQSSEENAIVAVA---ADSDSSKKIVDTFGQRTSIYRGVTRHRWTGRYEAH 243
Query: 249 LWDNSCRKEGQTRKGR 264
LWDNSCR+EGQ RKGR
Sbjct: 244 LWDNSCRREGQARKGR 259
>Medtr5g015070.1 | AP2 domain transcription factor, putative | HC |
chr5:5179958-5176273 | 20130731
Length = 544
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 37/40 (92%), Positives = 39/40 (97%)
Query: 225 TFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGR 264
TFGQRTSQYRGVTRHRWTGRYEAHLWDNSC+KEGQ RKG+
Sbjct: 245 TFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQARKGK 284
>Medtr8g068510.1 | AP2-like ethylene-responsive transcription factor
| LC | chr8:28591359-28586114 | 20130731
Length = 399
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 32/43 (74%), Positives = 38/43 (88%)
Query: 222 SIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGR 264
++ + G RTS YRGVTRHRWTGR+EAHLWDNSC++EGQ RKGR
Sbjct: 124 TVHSAGHRTSAYRGVTRHRWTGRFEAHLWDNSCKREGQKRKGR 166
>Medtr2g460730.1 | AP2-type transcription factor | HC |
chr2:25049516-25052612 | 20130731
Length = 363
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 10/73 (13%)
Query: 192 VGAISTVQVNEDNRKRSIAKSQAREPVPRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWD 251
+ A +TV V DN+ + + R VPR D+ QR+S YRGVTRHRWTGRYEAHLWD
Sbjct: 20 LKATNTVVV--DNKVK-----RTRRSVPR---DSPIQRSSIYRGVTRHRWTGRYEAHLWD 69
Query: 252 NSCRKEGQTRKGR 264
+C E Q +KGR
Sbjct: 70 KNCWNESQNKKGR 82
>Medtr4g130270.1 | AP2-like ethylene-responsive transcription factor
| HC | chr4:54266443-54269143 | 20130731
Length = 359
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 38/52 (73%), Gaps = 3/52 (5%)
Query: 213 QAREPVPRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGR 264
+ R+ VPR S QR+S YRGVTRHRWTGRYEAHLWD +C E Q +KGR
Sbjct: 34 RTRKSVPRTSPP---QRSSIYRGVTRHRWTGRYEAHLWDKNCWNESQNKKGR 82
>Medtr4g007770.1 | AP2-type transcription factor | HC |
chr4:1228729-1234955 | 20130731
Length = 324
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 32/37 (86%)
Query: 228 QRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGR 264
QR+S YRGVTRHRWTGRYEAHLWD +C E Q++KGR
Sbjct: 35 QRSSVYRGVTRHRWTGRYEAHLWDKNCWNESQSKKGR 71
>Medtr7g091390.1 | AP2-like ethylene-responsive transcription factor
| HC | chr7:36113167-36109176 | 20130731
Length = 414
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 36/51 (70%)
Query: 214 AREPVPRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGR 264
A+E + + G+R+S YRGVTRHRWTGRYEAHLWD S + Q +KG+
Sbjct: 42 AKERISKMPPCAAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGK 92
>Medtr8g468920.1 | AP2-like ethylene-responsive transcription factor
| HC | chr8:24991304-24988727 | 20130731
Length = 400
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 38/53 (71%)
Query: 212 SQAREPVPRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGR 264
S+ ++PV +S T +R+S++RGV+RHRWTGRYEAHLWD Q +KG+
Sbjct: 52 SEIQQPVSGQSTATTVKRSSRFRGVSRHRWTGRYEAHLWDKGTWNPTQKKKGK 104
>Medtr8g044040.1 | AP2 domain transcription factor | HC |
chr8:16858718-16855707 | 20130731
Length = 387
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 29/37 (78%)
Query: 228 QRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGR 264
+R+S YRGVTRHRWTGR+EAHLWD + Q +KG+
Sbjct: 55 KRSSIYRGVTRHRWTGRFEAHLWDKGSWNDIQKKKGK 91
>Medtr8g044070.1 | AP2 domain transcription factor | HC |
chr8:16870371-16864525 | 20130731
Length = 417
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 30/37 (81%)
Query: 228 QRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGR 264
+R+S YRGVTRHRWTGR+EAHLWD + + Q +KG+
Sbjct: 54 RRSSIYRGVTRHRWTGRFEAHLWDKTSWNKIQNKKGK 90
>Medtr7g009410.1 | AP2 domain transcription factor | HC |
chr7:2050515-2052629 | 20130731
Length = 392
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 35/55 (63%)
Query: 210 AKSQAREPVPRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGR 264
A A++ V S +R+S++RGV+RHRWTGR+EAHLWD Q +KG+
Sbjct: 46 ANKMAQKQVGENSTTNTSKRSSRFRGVSRHRWTGRFEAHLWDKLSWNTTQKKKGK 100
>Medtr6g011490.1 | AP2 domain transcription factor | HC |
chr6:3271820-3269777 | 20130731
Length = 371
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 24/32 (75%)
Query: 233 YRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGR 264
+RGV+RHRWTGRYEAHLWD Q +KG+
Sbjct: 65 FRGVSRHRWTGRYEAHLWDKLSWNMTQKKKGK 96