Miyakogusa Predicted Gene

Lj3g3v2577240.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2577240.1 Non Characterized Hit- tr|I1LJL3|I1LJL3_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,56.58,2e-16,PREDICTED
PROTEIN (FRAGMENT),NULL; GAG-POL-RELATED
RETROTRANSPOSON,NULL,CUFF.44302.1
         (153 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g093120.1 | SPFH domain/band 7 family protein | LC | chr3:...    64   4e-11
Medtr3g452820.1 | cysteine-rich RLK (receptor-like kinase) prote...    57   1e-08
Medtr7g026095.1 | DnaK family protein | LC | chr7:8638860-864077...    56   1e-08
Medtr4g079363.1 | hypothetical protein | HC | chr4:30665843-3066...    52   2e-07

>Medtr3g093120.1 | SPFH domain/band 7 family protein | LC |
           chr3:42570339-42574091 | 20130731
          Length = 534

 Score = 64.3 bits (155), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 33/68 (48%), Positives = 44/68 (64%), Gaps = 2/68 (2%)

Query: 11  SGDPLPAPTIYRTLLGRLIYL--TRPDISYAVGSLGQFLASLTTLHFQEALRILRYLKES 68
            G+ L  P  YR L+GRLIYL  TRP++SY+V  L QF+      H+  ALR++RYLK +
Sbjct: 303 QGEFLENPERYRRLVGRLIYLCFTRPELSYSVHILSQFMQQPREDHWTAALRVVRYLKGN 362

Query: 69  LGSGLFCD 76
            G G+F D
Sbjct: 363 PGQGIFLD 370


>Medtr3g452820.1 | cysteine-rich RLK (receptor-like kinase)
          protein, putative | LC | chr3:19408629-19407615 |
          20130731
          Length = 187

 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 4/82 (4%)

Query: 1  MDSIVKLHKTSGDPLPAPTIYRTLLGRLIYL--TRPDISYAVGSLGQFLASLTTLHFQEA 58
          MD+ VKL       L     Y+ L+G+LIYL  TRPDIS+ V ++ QF+ S T  H    
Sbjct: 1  MDATVKLGTLDNGTLVDKGRYQRLVGKLIYLSHTRPDISFVVCTMSQFMNSPTEEHMDAI 60

Query: 59 LRILRYLKESLGSGLFCDISYA 80
           RI++YL+  +  GL  D ++A
Sbjct: 61 YRIVKYLE--MTPGLSTDTNWA 80


>Medtr7g026095.1 | DnaK family protein | LC | chr7:8638860-8640776
          | 20130731
          Length = 347

 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 38/55 (69%), Gaps = 2/55 (3%)

Query: 22 RTLLGRLIYL--TRPDISYAVGSLGQFLASLTTLHFQEALRILRYLKESLGSGLF 74
          R L+GRL+YL  TRP+I++AV  + QF++    +H++ A RIL+YLK     GLF
Sbjct: 27 RRLVGRLLYLNITRPEIAFAVQQISQFVSKPKQVHYKAATRILQYLKSCPAKGLF 81



 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 5/82 (6%)

Query: 55  FQEALRILRYLKESLGSGLFCDI-----SYAVGSLGQFLASLTTLHFHEALRILRYLKES 109
           F + + IL++ +  +G  L+ +I     ++AV  + QF++    +H+  A RIL+YLK  
Sbjct: 16  FTKVIIILKFNRRLVGRLLYLNITRPEIAFAVQQISQFVSKPKQVHYKAATRILQYLKSC 75

Query: 110 LGSGLFFPTKPSLKLTSFIDSD 131
              GLF+ +   L L+ F DSD
Sbjct: 76  PAKGLFYSSSADLSLSGFADSD 97


>Medtr4g079363.1 | hypothetical protein | HC |
          chr4:30665843-30666627 | 20130731
          Length = 213

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 6/70 (8%)

Query: 1  MDSIVKLHKTSGDPLPAPTIYRTLLGRLIYLT--RPDISYAVGSLGQFLASLTTLHFQEA 58
          MD  VKL  + G+PL  P  Y    G+L YLT  RPDI++AV  + Q L +    H+   
Sbjct: 22 MDPNVKLLPSQGEPLKDPGRY----GKLNYLTVSRPDITFAVSVVSQSLNAPCDDHWNAV 77

Query: 59 LRILRYLKES 68
          +RIL+Y+K +
Sbjct: 78 IRILKYMKNA 87