Miyakogusa Predicted Gene

Lj3g3v2576770.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2576770.1 Non Characterized Hit- tr|K4CE63|K4CE63_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,48.89,0.000000000000008,G-gamma,G-protein gamma-like domain;
coiled-coil,NULL; seg,NULL,CUFF.44287.1
         (138 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g021170.1 | hypothetical protein | LC | chr8:7542560-75400...   168   1e-42
Medtr8g021170.2 | hypothetical protein | LC | chr8:7542560-75400...   133   5e-32
Medtr2g042200.1 | GGL domain protein | HC | chr2:18422927-184197...    83   9e-17

>Medtr8g021170.1 | hypothetical protein | LC | chr8:7542560-7540059
           | 20130731
          Length = 154

 Score =  168 bits (426), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 82/102 (80%), Positives = 91/102 (89%), Gaps = 1/102 (0%)

Query: 6   MSPKSPLPGFVDFHGKRKQMVKIQVLEREIGVLQEELKSLEGLHPASRCCKELDAFVGSI 65
           M PKSPLPGFVDFHGKRKQMVKIQVLE+EIG+LQEELKSLEGLHPASRCC ELDAFVGSI
Sbjct: 18  MCPKSPLPGFVDFHGKRKQMVKIQVLEKEIGLLQEELKSLEGLHPASRCCIELDAFVGSI 77

Query: 66  SDPFTPIRKESDTESHHFRKQICSVPWICCSSSCLLQKKMAK 107
           SDPFTP RK + ++SH+F K+I S+PWICCS SC   KK+AK
Sbjct: 78  SDPFTPTRKHTISKSHYFGKKI-SLPWICCSYSCFPHKKIAK 118


>Medtr8g021170.2 | hypothetical protein | LC |
          chr8:7542560-7540059 | 20130731
          Length = 101

 Score =  133 bits (335), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 63/71 (88%), Positives = 66/71 (92%)

Query: 6  MSPKSPLPGFVDFHGKRKQMVKIQVLEREIGVLQEELKSLEGLHPASRCCKELDAFVGSI 65
          M PKSPLPGFVDFHGKRKQMVKIQVLE+EIG+LQEELKSLEGLHPASRCC ELDAFVGSI
Sbjct: 18 MCPKSPLPGFVDFHGKRKQMVKIQVLEKEIGLLQEELKSLEGLHPASRCCIELDAFVGSI 77

Query: 66 SDPFTPIRKES 76
          SDPFTP  + S
Sbjct: 78 SDPFTPTYESS 88


>Medtr2g042200.1 | GGL domain protein | HC |
          chr2:18422927-18419772 | 20130731
          Length = 238

 Score = 82.8 bits (203), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 39/70 (55%), Positives = 52/70 (74%), Gaps = 1/70 (1%)

Query: 7  SPKSPLPGFVDFHGKRKQMVKIQVLEREIGVLQEELKSLEGLHPASRCCKELDAFVGSIS 66
          SPK+P P + D +GKR++M K+Q+LEREI  L+EELKS EG  PAS+CCKE+  FV + S
Sbjct: 20 SPKAP-PEYPDLYGKRREMAKVQMLEREISFLEEELKSSEGFQPASKCCKEIADFVMANS 78

Query: 67 DPFTPIRKES 76
          DP  P  K++
Sbjct: 79 DPLLPTTKKN 88