Miyakogusa Predicted Gene

Lj3g3v2576600.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2576600.1 Non Characterized Hit- tr|J3LPM8|J3LPM8_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB03G3,39.39,1e-16,seg,NULL; coiled-coil,NULL,CUFF.44261.1
         (263 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g021237.1 | hypothetical protein | HC | chr8:7629440-76324...   365   e-101
Medtr2g042670.1 | hypothetical protein | LC | chr2:18610647-1861...    86   3e-17

>Medtr8g021237.1 | hypothetical protein | HC | chr8:7629440-7632401
           | 20130731
          Length = 262

 Score =  365 bits (937), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 187/264 (70%), Positives = 201/264 (76%), Gaps = 3/264 (1%)

Query: 1   MKFLSWMQNKLGGKQENRKSNTNAAPPACQAKQEPREEFSDWPHGFLSIGTFGKKDEIKX 60
           MKF +WMQNKLGGKQENRKSNT+ +     AK EPREEFSDWPH  L+IGTFG  +EI  
Sbjct: 1   MKFFNWMQNKLGGKQENRKSNTSTS--TTYAKPEPREEFSDWPHSLLAIGTFGNNNEITQ 58

Query: 61  XXXXXXXXXXXPSSSEEIADFTPEEIGKLQKELTRLLRRKPNVEKEISELPLDRFLNCPS 120
                      PSSSEE+ DFTPEEIGKLQKELTRLLRRKPNVEKEISELPLDRFLNCPS
Sbjct: 59  NIENQNTQQEDPSSSEEVPDFTPEEIGKLQKELTRLLRRKPNVEKEISELPLDRFLNCPS 118

Query: 121 SLEVDRRISNALCXXXXXXXXXX-XXTLSVILDRCKDVCAEXXXXXXXXXXXXXXXXXMF 179
           SLEVDRRISNALC             TLSVILD+CKD+CAE                 MF
Sbjct: 119 SLEVDRRISNALCSESGGDKDEDIEKTLSVILDKCKDICAEKSKKSIGKKSISFLLKKMF 178

Query: 180 VCRSGFAPTPSLRDTLQESRMEKLLRTMLHKRIYTQNSSRASSMKKCLEDKKLIRNRNED 239
           VCRSGFAPTPSLRDTLQESRMEKLLRTMLHK++YTQN+SRA  +KKCLE+KK I+ RNED
Sbjct: 179 VCRSGFAPTPSLRDTLQESRMEKLLRTMLHKKLYTQNNSRAPVLKKCLENKKSIKKRNED 238

Query: 240 EPEERKDEGCKWVKTDSEYIVLEI 263
           E EER DEG KWVKTDSEYIVLEI
Sbjct: 239 EAEERIDEGSKWVKTDSEYIVLEI 262


>Medtr2g042670.1 | hypothetical protein | LC |
           chr2:18610647-18613272 | 20130731
          Length = 237

 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 114/279 (40%), Gaps = 58/279 (20%)

Query: 1   MKFLSWMQNKLGGKQENRKSNTNAAPPACQAKQEPREEFSDWPHGFLSIGTFGKKDEIKX 60
           M    WMQN+L G     K ++ +A       +  ++EFSDW H  L+IGT G  +  + 
Sbjct: 1   MNIFKWMQNRLNGTNGKMKPSSISATHH-MLNETYKQEFSDWDHAILAIGTLGNNNLNEN 59

Query: 61  XXXXXXXXXXXPSSSEEIADFTPEEIGKLQKELTRLLRRKPNVEKEISELPLDRFLNCPS 120
                       S  +   +F+ EE+G  Q EL      K N+E+  +  P +  +    
Sbjct: 60  SNKSIDEEDSH-SFQDFTHEFSFEEVGNFQNEL------KMNLEESGNFYPSNNLICNRG 112

Query: 121 SLEVDRRISNALCXXXXXXXXXXXXTLSVILDRCKDVCAEXXXXXXXXXXXXXXXXXMFV 180
              +D+   N +             +LS +L +                        +FV
Sbjct: 113 RKSLDKSNKNEVSNQ----------SLSFLLKK------------------------IFV 138

Query: 181 CRSGFAPTPSLRDTLQ-ESRMEKLLRTMLHKRIYTQNSSRASSMKKCLEDKK-------- 231
           C     PT   +D L  ESRMEK+LR +LHK+I+   S   + + K LE+          
Sbjct: 139 CGGELPPTSVFKDPLSTESRMEKILRAILHKKIHPHGSCSTTFVNKYLENNSKPEYDYED 198

Query: 232 -------LIRNRNEDEPEERKDEGCKWVKTDSEYIVLEI 263
                        E+      ++GCKWVKT+SEYIVLEI
Sbjct: 199 EDEDEDEYEYEYEEELKNSVVEKGCKWVKTNSEYIVLEI 237