Miyakogusa Predicted Gene

Lj3g3v2576520.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2576520.1 Non Characterized Hit- tr|B9T3B1|B9T3B1_RICCO
Serine/threonine-protein kinase PBS1, putative
OS=Rici,46.88,0.0000000000002, ,CUFF.44255.1
         (91 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g021350.1 | receptor-like kinase, putative | HC | chr8:766...   114   3e-26
Medtr4g124990.1 | LRR receptor-like kinase | HC | chr4:51844574-...    55   2e-08
Medtr2g042710.1 | LRR receptor-like kinase | HC | chr2:18629734-...    52   2e-07

>Medtr8g021350.1 | receptor-like kinase, putative | HC |
           chr8:7667205-7664932 | 20130731
          Length = 727

 Score =  114 bits (284), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 62/95 (65%), Positives = 70/95 (73%), Gaps = 7/95 (7%)

Query: 1   MGEMEKLLHIGAACTESNPQKRLDMAEAVRRIEEIKGKG---GQESRTIEVLPSPTDGYA 57
           + EM++L+HIGAACTESNPQ RLDM EAVRRIEEIK  G    QE RTIEVLP   D   
Sbjct: 636 LSEMKQLVHIGAACTESNPQNRLDMMEAVRRIEEIKTNGVDQVQELRTIEVLPGFVD--- 692

Query: 58  ESQMFDNQGHGV-QSQRRHESNSFGSQDKLEFGIS 91
            SQ  DNQGH V QS +RH ++SFGS+D  EFGIS
Sbjct: 693 SSQACDNQGHVVDQSNKRHGTSSFGSKDNFEFGIS 727


>Medtr4g124990.1 | LRR receptor-like kinase | HC |
           chr4:51844574-51846577 | 20130731
          Length = 627

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/36 (63%), Positives = 31/36 (86%)

Query: 1   MGEMEKLLHIGAACTESNPQKRLDMAEAVRRIEEIK 36
           +  M +LL IGAACTESNP++RL+M EA+RRIEE++
Sbjct: 591 INHMLQLLQIGAACTESNPEQRLNMKEAIRRIEELQ 626


>Medtr2g042710.1 | LRR receptor-like kinase | HC |
           chr2:18629734-18627108 | 20130731
          Length = 630

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/31 (74%), Positives = 27/31 (87%)

Query: 4   MEKLLHIGAACTESNPQKRLDMAEAVRRIEE 34
           M +LL IGAACTESNP++RL M EA+RRIEE
Sbjct: 597 MLQLLLIGAACTESNPEQRLHMKEAIRRIEE 627