Miyakogusa Predicted Gene

Lj3g3v2576220.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2576220.1 Non Characterized Hit- tr|G7L8C1|G7L8C1_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,53.61,0.00000000002,no description,DNA-binding SAP; no
description,NULL; seg,NULL; CCCH zinc finger,NULL; SAP
domain,NUL,CUFF.44233.1
         (497 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g022240.1 | zinc finger CCCH domain protein, putative | HC...   422   e-118
Medtr5g017820.1 | zinc finger CCCH domain protein | HC | chr5:65...   223   3e-58
Medtr8g022220.1 | hypothetical protein | HC | chr8:7848136-78485...    76   6e-14

>Medtr8g022240.1 | zinc finger CCCH domain protein, putative | HC |
           chr8:7853778-7856391 | 20130731
          Length = 396

 Score =  422 bits (1085), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 239/420 (56%), Positives = 272/420 (64%), Gaps = 61/420 (14%)

Query: 93  AGLLEKLKVDECKLYLRKNGLRLTGNKATLIQRIKEHLEIVNGEGEKKYPPSSFVLNCKG 152
           AGL+EKLKVDECK+YL+K+GLRLTGNK TLIQRIKEH EI+NG GE KYPP SFVLNCKG
Sbjct: 17  AGLVEKLKVDECKMYLKKSGLRLTGNKDTLIQRIKEHQEIINGGGENKYPPHSFVLNCKG 76

Query: 153 DACTGDVVLFEQNVYEMFSIASRSATGPPCGKRTVAGRIVKESYGAAKQQHTFTIEVLWS 212
           DACTGDVVLFEQNVYEMF+IASRS  GPPCGKR VAG IVKESYGAAKQQHTFTIEVLWS
Sbjct: 77  DACTGDVVLFEQNVYEMFNIASRSGGGPPCGKRIVAGSIVKESYGAAKQQHTFTIEVLWS 136

Query: 213 KGEKPLRPLYPLLIKGRNLYRLKTLRQKWEDEGKRQQILMEKHSRGFVARADREVRVQXX 272
           KGEKPL PL+PLLIKGRNLYRLKTLRQKWEDEGKRQ++LMEKHSRG VARADRE R+Q  
Sbjct: 137 KGEKPLPPLHPLLIKGRNLYRLKTLRQKWEDEGKRQKLLMEKHSRGSVARADREARIQEK 196

Query: 273 XXXXXXXXXXXXXXDSVRNQCQSHSHIVVPRYQTQE-TDVSMNSEKAEFPSQNSGLSDHA 331
                         DS +NQ QSHS +   + Q QE T V +N +K EFPSQ+S LS   
Sbjct: 197 EMRKSMKENRISKKDSAKNQFQSHSTMARSQNQPQETTTVFINPKKTEFPSQHSALS--- 253

Query: 332 TKQTSAIISKP----------------TMGSDQLGYSGKTPFTVNHMYNQQSLKSSADCM 375
              T AI++KP                 MGSDQL  SGK+ F  N+ Y            
Sbjct: 254 ---TPAIVNKPAAVTEQRVQPTYSRTVVMGSDQLRNSGKSSFIANNYY------------ 298

Query: 376 STFNRGAERSANYNRNDFHSRDNRTTIEKRSTFGRGAELSANYNRNDFHSRENRTTIEKR 435
                           D+H RDN T     ST  R     A  NR   + R+  T+    
Sbjct: 299 ---------------ADYHYRDNPT-----STAERYNAFIAETNRRASYQRKPLTSANHF 338

Query: 436 HPSIAERNGFTERTYRREPLANANHFHPLTPNRESFRQGQLCRYYSRGRCYFGDNCKYLH 495
            P  A  N F  R+       NANH H    NRES++Q Q CR+++RGRC++GDNCK+LH
Sbjct: 339 VPRSANANHFVPRS------ENANHMHTSISNRESYQQKQFCRHFARGRCHYGDNCKFLH 392


>Medtr5g017820.1 | zinc finger CCCH domain protein | HC |
           chr5:6587856-6584215 | 20130731
          Length = 447

 Score =  223 bits (569), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 111/193 (57%), Positives = 136/193 (70%), Gaps = 6/193 (3%)

Query: 80  DDDDFEIVQKTIN----AGLLEKLKVDECKLYLRKNGLRLTGNKATLIQRIKEHLEIVNG 135
           D DD  + +K ++       ++ LK++ECK YLRK+GLRLTGN+A  I RIKEH  + +G
Sbjct: 66  DVDDESLSEKVVSLLQGGKDIDSLKLNECKAYLRKHGLRLTGNRAVCIARIKEHWRLKHG 125

Query: 136 EGEKKYPPSSFVLNCKGDACTGDVVLFEQNVYEMFSIASRSATGPPCGKRTVAGRIVKES 195
            G   YP SSF +NC GD C GDVVLF Q VYE FS  +R   G   G RTVAGR+VKES
Sbjct: 126 SGYTLYPRSSFNINCTGDVCMGDVVLFRQKVYEKFSKGARH--GRVRGSRTVAGRVVKES 183

Query: 196 YGAAKQQHTFTIEVLWSKGEKPLRPLYPLLIKGRNLYRLKTLRQKWEDEGKRQQILMEKH 255
           YGAAKQQHTFT+EVLWS G + L PL PLL+KGRNLY++KT RQKW++E  R ++L EKH
Sbjct: 184 YGAAKQQHTFTVEVLWSSGVRKLPPLTPLLVKGRNLYKMKTYRQKWKNEADRVKVLSEKH 243

Query: 256 SRGFVARADREVR 268
            RG  AR  R +R
Sbjct: 244 RRGAAARFVRGLR 256


>Medtr8g022220.1 | hypothetical protein | HC |
          chr8:7848136-7848528 | 20130731
          Length = 101

 Score = 76.3 bits (186), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 52/97 (53%), Positives = 64/97 (65%), Gaps = 9/97 (9%)

Query: 1  MATQMEEE-EMHQITSNDDSEGSSYLGSEFDDSEGDPDFEILEETQISFSNLSVTSKAKA 59
          MAT+ +   E+H+I +  +SEGS    SE DDSE DPDF++LEET  SFSNLS+ +KAK 
Sbjct: 1  MATKQDSPMELHEIIT--ESEGSDPY-SECDDSEEDPDFDMLEETHRSFSNLSIKNKAKK 57

Query: 60 RSVKGKGLATTENDPQV-----PSPDDDDFEIVQKTI 91
          R V  KGLA  E + +V     PS DDD FE VQK I
Sbjct: 58 RIVDDKGLAGIEMNSKVLEMNAPSLDDDGFEKVQKII 94