Miyakogusa Predicted Gene

Lj3g3v2575990.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2575990.1 tr|G7KAU4|G7KAU4_MEDTR CCAAT/enhancer-binding
protein zeta OS=Medicago truncatula GN=MTR_5g019130
PE,70.53,0,CCAAT-BINDING FACTOR-RELATED,NULL; ARM
repeat,Armadillo-type fold; no description,Armadillo-like
hel,CUFF.44217.1
         (641 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g019130.1 | CCAAT-binding factor | HC | chr5:7224760-72338...   898   0.0  
Medtr4g119670.1 | CCAAT-binding factor | HC | chr4:49603372-4959...   897   0.0  

>Medtr5g019130.1 | CCAAT-binding factor | HC | chr5:7224760-7233813
           | 20130731
          Length = 1026

 Score =  898 bits (2320), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 457/584 (78%), Positives = 505/584 (86%), Gaps = 20/584 (3%)

Query: 2   AKTNSTKPSQPTEGDVDTLKSDIASFASQLGLSTSQS-YSGFNDVDFRKTKPNT------ 54
           AK+ S KP   TE D++ LKS++ASFAS LGLSTSQ+  SGFNDVDFRKTKP        
Sbjct: 3   AKSKSDKPLTNTE-DINLLKSEVASFASSLGLSTSQTNSSGFNDVDFRKTKPKKQQPQQQ 61

Query: 55  ---EKATPQNTQKPKNDT----NRPHEHXXXXXXXXXXXXXXXXXXXXXXDDANKDKGF- 106
              EK TPQN QKP N T    N+PHE+                      +DANK+KG+ 
Sbjct: 62  KTPEKVTPQNNQKPNNKTFGKSNQPHENSKLKKPEPKPKPPVLSLN----NDANKEKGYY 117

Query: 107 NNFKSLPKLPLMKASVLGVWFEEAVELEAKVIGEGKKAEIRNVGEWKSLVQKKKELGQRL 166
           N FK+LPKLPLMKAS LGVWFE+A ELE KVIGEGKK +++N+GEWK  V+KK+ LG+RL
Sbjct: 118 NKFKNLPKLPLMKASELGVWFEDAGELEGKVIGEGKKVDVKNLGEWKGFVEKKRVLGERL 177

Query: 167 MAQYAQDYEATRGKSSDIKMLITTQRSGTAADKVSAFSVLVGDNPIANLRALDALLGMVT 226
           MAQ+AQDYE+TRG+SSDIKMLI+TQRSGTAADKVSAFSVLVGDNP+ANLR+LDALLGMVT
Sbjct: 178 MAQFAQDYESTRGRSSDIKMLISTQRSGTAADKVSAFSVLVGDNPVANLRSLDALLGMVT 237

Query: 227 SKVGKRHALTGFEALQELFIASLLPDRKLKTLIQRPLNHITETKDGYSLLLFWYWEECLK 286
           SKVGKRHAL+GFEALQELFIASLLPDRKLKTLIQRPLNHI ETKDG+SLLLFWYWEECLK
Sbjct: 238 SKVGKRHALSGFEALQELFIASLLPDRKLKTLIQRPLNHIPETKDGHSLLLFWYWEECLK 297

Query: 287 QRYERFVVALEEASRDMLPALKSKALKAIYMLLSRKSEQERKLLSALVNKLGDPDTKAAS 346
           QRYERFVVALEEASRDMLPALK+K+LK IY+LLSRKSEQER+LLSALVNKLGDPD KAAS
Sbjct: 298 QRYERFVVALEEASRDMLPALKNKSLKTIYVLLSRKSEQERRLLSALVNKLGDPDNKAAS 357

Query: 347 NADYHLTNLLSDHPIMKAVVIEEVDSFLFRPHLGPRSQYHTVNFLSQIRLSNKGDGPKVA 406
           NADYHL+NLLS HP MKAVV+ EVDSFLFRPHLGPR QYH VNFLSQ+RL+NKGDGPKVA
Sbjct: 358 NADYHLSNLLSQHPNMKAVVVNEVDSFLFRPHLGPRGQYHAVNFLSQLRLTNKGDGPKVA 417

Query: 407 KRLIDVYFALFKVMITKASSNGKSDKSGKPNPKEKKSNELSESHAELDSRLLSALLTGVN 466
           KRLIDVYFALFKV+IT  S+N   DKSGK N KEKK+ E SE HAE+DSRLLSALLTGVN
Sbjct: 418 KRLIDVYFALFKVLITGPSNNQTVDKSGKENAKEKKTEEFSELHAEMDSRLLSALLTGVN 477

Query: 467 RAFPFVASIEADEIVDVQTPILFQLVHSKNFNVGVQALMLLDKISAKNQIASDRFYRALY 526
           RAFPFV+S EAD+IVDVQTP+LFQLVHSKNFNVGVQALMLLDKIS+KNQIASDRFYRALY
Sbjct: 478 RAFPFVSSDEADDIVDVQTPVLFQLVHSKNFNVGVQALMLLDKISSKNQIASDRFYRALY 537

Query: 527 SKLLLPAAMNTSKAEMFIALLLRAMKRDINIKRVAAFSKRLLQV 570
           SKLLLPAAMNTSKAEMFIAL+LRAMKRD+N+KRVAAFSKRLLQ+
Sbjct: 538 SKLLLPAAMNTSKAEMFIALILRAMKRDVNLKRVAAFSKRLLQI 581


>Medtr4g119670.1 | CCAAT-binding factor | HC |
           chr4:49603372-49594166 | 20130731
          Length = 1032

 Score =  897 bits (2319), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 456/583 (78%), Positives = 504/583 (86%), Gaps = 19/583 (3%)

Query: 2   AKTNSTKPSQPTEGDVDTLKSDIASFASQLGLSTSQS-YSGFNDVDFRKTKPNT------ 54
           AK+ S KP  P   D++ LKS++ASFAS LGLSTSQ+  SGFNDVDFRKTKP        
Sbjct: 3   AKSKSDKP-LPNIEDINLLKSEVASFASSLGLSTSQTDSSGFNDVDFRKTKPKKQQQQQK 61

Query: 55  --EKATPQNTQKPKNDT----NRPHEHXXXXXXXXXXXXXXXXXXXXXXDDANKDKGF-N 107
             EKATPQNTQKPKN T    N PHE+                      +DANK KG+ N
Sbjct: 62  TPEKATPQNTQKPKNKTFSKNNEPHENSKSKKPEPKPKPPVLSLD----NDANKGKGYYN 117

Query: 108 NFKSLPKLPLMKASVLGVWFEEAVELEAKVIGEGKKAEIRNVGEWKSLVQKKKELGQRLM 167
            FK+LPKLPLMKAS LGVWFE+A ELE KVIGEGKK E++N+GEWK   +KK+ELG+RLM
Sbjct: 118 KFKNLPKLPLMKASELGVWFEDAGELEGKVIGEGKKVEMKNLGEWKGFAEKKRELGERLM 177

Query: 168 AQYAQDYEATRGKSSDIKMLITTQRSGTAADKVSAFSVLVGDNPIANLRALDALLGMVTS 227
           AQ++QDYE+TRG+SSDIKMLI+TQRSGTAADKVSAFSVLVGDNP+ANLR+LDALLGMVTS
Sbjct: 178 AQFSQDYESTRGRSSDIKMLISTQRSGTAADKVSAFSVLVGDNPVANLRSLDALLGMVTS 237

Query: 228 KVGKRHALTGFEALQELFIASLLPDRKLKTLIQRPLNHITETKDGYSLLLFWYWEECLKQ 287
           KVGKRHAL+GFEALQELFIASLLPDRKLKTLIQRPLNHI ETKDG+SLLLFWYWEECLKQ
Sbjct: 238 KVGKRHALSGFEALQELFIASLLPDRKLKTLIQRPLNHIPETKDGHSLLLFWYWEECLKQ 297

Query: 288 RYERFVVALEEASRDMLPALKSKALKAIYMLLSRKSEQERKLLSALVNKLGDPDTKAASN 347
           RYERFVV+LEEASRDMLPALK+K+LK IY+LLSRKSEQER+LLSALVNKLGDPD KAASN
Sbjct: 298 RYERFVVSLEEASRDMLPALKNKSLKTIYVLLSRKSEQERRLLSALVNKLGDPDNKAASN 357

Query: 348 ADYHLTNLLSDHPIMKAVVIEEVDSFLFRPHLGPRSQYHTVNFLSQIRLSNKGDGPKVAK 407
           ADYHL+NLLS HP MKAVV+ EVDSFLFRPHLGPR QYH VNFLSQ+RL+NKGDGPKVAK
Sbjct: 358 ADYHLSNLLSQHPNMKAVVVNEVDSFLFRPHLGPRGQYHAVNFLSQLRLTNKGDGPKVAK 417

Query: 408 RLIDVYFALFKVMITKASSNGKSDKSGKPNPKEKKSNELSESHAELDSRLLSALLTGVNR 467
           RLIDVYFALFKV+IT  S++   DKS K N KEKK  E SESHAE+DSRLLSALLTGVNR
Sbjct: 418 RLIDVYFALFKVLITGPSNSQTVDKSSKENSKEKKPEEFSESHAEMDSRLLSALLTGVNR 477

Query: 468 AFPFVASIEADEIVDVQTPILFQLVHSKNFNVGVQALMLLDKISAKNQIASDRFYRALYS 527
           AFPFV+S EAD+I+DVQTP+LFQLVHSKNFNVGVQALMLLDKIS+KNQIASDRFYRALYS
Sbjct: 478 AFPFVSSDEADDIIDVQTPVLFQLVHSKNFNVGVQALMLLDKISSKNQIASDRFYRALYS 537

Query: 528 KLLLPAAMNTSKAEMFIALLLRAMKRDINIKRVAAFSKRLLQV 570
           KLLLPAAMNTSKAEMFIAL+LRAMKRD+N+KRVAAFSKRLLQ+
Sbjct: 538 KLLLPAAMNTSKAEMFIALILRAMKRDVNLKRVAAFSKRLLQI 580