Miyakogusa Predicted Gene

Lj3g3v2575910.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2575910.2 Non Characterized Hit- tr|D8R5Y8|D8R5Y8_SELML
Putative uncharacterized protein OS=Selaginella
moelle,43.82,0.000000000000007,39S RIBOSOMAL PROTEIN L43,NULL;
L51_S25_CI-B8,Ribosomal protein/NADH dehydrogenase domain;
Thioredox,CUFF.44201.2
         (90 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g022770.2 | ribosomal protein L51/S25/CI-B8 domain protein...   170   3e-43
Medtr8g022770.3 | ribosomal protein L51/S25/CI-B8 domain protein...   170   3e-43
Medtr8g022770.1 | ribosomal protein L51/S25/CI-B8 domain protein...   169   7e-43

>Medtr8g022770.2 | ribosomal protein L51/S25/CI-B8 domain protein |
           HC | chr8:8087309-8090173 | 20130731
          Length = 109

 Score =  170 bits (430), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 79/90 (87%), Positives = 83/90 (92%)

Query: 1   MESHLPEFKEKNPQLEVVTEMIRGQHPHLKGFYENKNQRVVCVKNLDPEDILLQATRLRN 60
           MESHLP FKE NPQLEV TEMIRGQHPHLK FY+N N RVVCVKN+DPE+ILL ATRLRN
Sbjct: 20  MESHLPAFKEANPQLEVDTEMIRGQHPHLKAFYKNHNDRVVCVKNMDPEEILLHATRLRN 79

Query: 61  ALGRKVIKLRTRHVTKHPSVQGTWTTAVKY 90
           ALGRKVIKLRTRHVTKHPSVQGTWTTA+KY
Sbjct: 80  ALGRKVIKLRTRHVTKHPSVQGTWTTALKY 109


>Medtr8g022770.3 | ribosomal protein L51/S25/CI-B8 domain protein |
           HC | chr8:8087309-8090173 | 20130731
          Length = 109

 Score =  170 bits (430), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 79/90 (87%), Positives = 83/90 (92%)

Query: 1   MESHLPEFKEKNPQLEVVTEMIRGQHPHLKGFYENKNQRVVCVKNLDPEDILLQATRLRN 60
           MESHLP FKE NPQLEV TEMIRGQHPHLK FY+N N RVVCVKN+DPE+ILL ATRLRN
Sbjct: 20  MESHLPAFKEANPQLEVDTEMIRGQHPHLKAFYKNHNDRVVCVKNMDPEEILLHATRLRN 79

Query: 61  ALGRKVIKLRTRHVTKHPSVQGTWTTAVKY 90
           ALGRKVIKLRTRHVTKHPSVQGTWTTA+KY
Sbjct: 80  ALGRKVIKLRTRHVTKHPSVQGTWTTALKY 109


>Medtr8g022770.1 | ribosomal protein L51/S25/CI-B8 domain protein |
           HC | chr8:8087307-8090173 | 20130731
          Length = 119

 Score =  169 bits (427), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 79/90 (87%), Positives = 83/90 (92%)

Query: 1   MESHLPEFKEKNPQLEVVTEMIRGQHPHLKGFYENKNQRVVCVKNLDPEDILLQATRLRN 60
           MESHLP FKE NPQLEV TEMIRGQHPHLK FY+N N RVVCVKN+DPE+ILL ATRLRN
Sbjct: 30  MESHLPAFKEANPQLEVDTEMIRGQHPHLKAFYKNHNDRVVCVKNMDPEEILLHATRLRN 89

Query: 61  ALGRKVIKLRTRHVTKHPSVQGTWTTAVKY 90
           ALGRKVIKLRTRHVTKHPSVQGTWTTA+KY
Sbjct: 90  ALGRKVIKLRTRHVTKHPSVQGTWTTALKY 119