Miyakogusa Predicted Gene

Lj3g3v2542370.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2542370.2 tr|Q9MAH6|Q9MAH6_ARATH F12M16.15 OS=Arabidopsis
thaliana GN=At1g53250 PE=4 SV=1,42.19,3e-17,coiled-coil,NULL;
seg,NULL,CUFF.44157.2
         (526 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g117530.1 | NUMOD3 motif protein | HC | chr7:48689940-4868...   359   4e-99
Medtr7g117530.2 | NUMOD3 motif protein | HC | chr7:48689904-4868...   280   3e-75
Medtr7g117530.3 | NUMOD3 motif protein | HC | chr7:48689940-4868...   264   2e-70
Medtr8g464010.1 | hypothetical protein | HC | chr8:22600722-2259...    89   1e-17

>Medtr7g117530.1 | NUMOD3 motif protein | HC |
           chr7:48689940-48685784 | 20130731
          Length = 557

 Score =  359 bits (921), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 226/512 (44%), Positives = 300/512 (58%), Gaps = 51/512 (9%)

Query: 58  FLVKACAT--TTLE--PKRVAGEEGEVLGSK-MLLESCYEDSE--GLDEREKLRRMRISK 110
           FLVKA AT  T +E  PK       E L     +L   Y+D +   LDE EKLRR+RISK
Sbjct: 50  FLVKAVATAATIIEQPPKFNNNHLEEPLNPHPFMLHHHYDDDDERPLDESEKLRRLRISK 109

Query: 111 ANKGNTPWNKGRKLSKHSAETLRKIKERTRLAMQSPKVKMKLVNPRNAHSAERKQKIAAG 170
           ANKGNTPWNKGRK   HS ETL+KI+ERTR+AMQ+PKVKMKL N  +A + E K KI+ G
Sbjct: 110 ANKGNTPWNKGRK---HSPETLQKIRERTRIAMQNPKVKMKLTNLGHAQTTETKMKISVG 166

Query: 171 VKMRWQRRREKMAVQETCCLEWQNLIAQASREGYVDQKELQWNXXXXXXXXXXXXXXXXX 230
           V+  W+ RR +  VQE+CC EWQNLIA+ASR+G+V Q+ELQWN                 
Sbjct: 167 VRKLWEMRRGRKMVQESCCFEWQNLIAEASRQGFVGQEELQWNSYVTLDEQLKQEWLVSV 226

Query: 231 XQRKQMPRAPGSKTTPWTSGQRRKVAEAIS---VDLEYRRKGYTTKAKYHDIEGAEMKPR 287
            +RKQM R P S   P +  QRRK+AEAI+    D +YR +  +  AKYH     E KPR
Sbjct: 227 EERKQMARTPVSNRAPKSPEQRRKIAEAIAAKWADPDYRERVCSAIAKYH--HSTERKPR 284

Query: 288 RRPSDDGQ-STRSNTVMEKDPANDISVESRTRILNLISSGNAEFPAFKDHLESPKLDMMK 346
            RPS   Q + +   + ++D    I ++S ++I+  I     + PA+KD L + KL+M+K
Sbjct: 285 TRPSYSAQPTKKKKPITKRDSDTSIVIKSASKIVKPIQLRKRKSPAYKDPLVNSKLEMIK 344

Query: 347 SVKAQRGVAETKLNKXXXXXXXXXXXXXXXXXXXXXTEMKSPFAQASLMESRKLIAEAIQ 406
           +++AQR   +T+  +                        KSP AQ+SL+E+RKLIAEAIQ
Sbjct: 345 NIRAQRASVDTRQTQAIQQARLLIAEAEKAAKALEVAAAKSPIAQSSLIETRKLIAEAIQ 404

Query: 407 SLQSIDTKGITASNVPSVALAMANEENDTEFEVLSQSHMLPINGKKMLSSSDYNKFSEDL 466
           SL+SIDT+ I   +VPSV+ +  N+EN++ F+V + S M  +NG   LS S Y KFSED 
Sbjct: 405 SLESIDTQKIDDCSVPSVSWSKVNQENESAFDVRNPSEMAQVNGHTTLSPSFY-KFSEDF 463

Query: 467 ------------------DKCA---------------SDQQMETEQDQSSEYKTDPSPTV 493
                             + CA               S QQ ETEQD+SSE +TD SPTV
Sbjct: 464 GELSLERPVNGVPELHLTNGCASLPFSLNSQINQDSQSKQQRETEQDESSEDETDHSPTV 523

Query: 494 LGVQSIKNETQLKLPAVVSKKWVRGRLVELKQ 525
           +G+QS+++ET L    + +KKWVRGRLVE+ +
Sbjct: 524 MGIQSLEDET-LSSSPIATKKWVRGRLVEVSE 554


>Medtr7g117530.2 | NUMOD3 motif protein | HC |
           chr7:48689904-48685841 | 20130731
          Length = 419

 Score =  280 bits (715), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 173/420 (41%), Positives = 239/420 (56%), Gaps = 41/420 (9%)

Query: 143 MQSPKVKMKLVNPRNAHSAERKQKIAAGVKMRWQRRREKMAVQETCCLEWQNLIAQASRE 202
           MQ+PKVKMKL N  +A + E K KI+ GV+  W+ RR +  VQE+CC EWQNLIA+ASR+
Sbjct: 1   MQNPKVKMKLTNLGHAQTTETKMKISVGVRKLWEMRRGRKMVQESCCFEWQNLIAEASRQ 60

Query: 203 GYVDQKELQWNXXXXXXXXXXXXXXXXXXQRKQMPRAPGSKTTPWTSGQRRKVAEAIS-- 260
           G+V Q+ELQWN                  +RKQM R P S   P +  QRRK+AEAI+  
Sbjct: 61  GFVGQEELQWNSYVTLDEQLKQEWLVSVEERKQMARTPVSNRAPKSPEQRRKIAEAIAAK 120

Query: 261 -VDLEYRRKGYTTKAKYHDIEGAEMKPRRRPSDDGQ-STRSNTVMEKDPANDISVESRTR 318
             D +YR +  +  AKYH     E KPR RPS   Q + +   + ++D    I ++S ++
Sbjct: 121 WADPDYRERVCSAIAKYH--HSTERKPRTRPSYSAQPTKKKKPITKRDSDTSIVIKSASK 178

Query: 319 ILNLISSGNAEFPAFKDHLESPKLDMMKSVKAQRGVAETKLNKXXXXXXXXXXXXXXXXX 378
           I+  I     + PA+KD L + KL+M+K+++AQR   +T+  +                 
Sbjct: 179 IVKPIQLRKRKSPAYKDPLVNSKLEMIKNIRAQRASVDTRQTQAIQQARLLIAEAEKAAK 238

Query: 379 XXXXTEMKSPFAQASLMESRKLIAEAIQSLQSIDTKGITASNVPSVALAMANEENDTEFE 438
                  KSP AQ+SL+E+RKLIAEAIQSL+SIDT+ I   +VPSV+ +  N+EN++ F+
Sbjct: 239 ALEVAAAKSPIAQSSLIETRKLIAEAIQSLESIDTQKIDDCSVPSVSWSKVNQENESAFD 298

Query: 439 VLSQSHMLPINGKKMLSSSDYNKFSEDL------------------DKCA---------- 470
           V + S M  +NG   LS S Y KFSED                   + CA          
Sbjct: 299 VRNPSEMAQVNGHTTLSPSFY-KFSEDFGELSLERPVNGVPELHLTNGCASLPFSLNSQI 357

Query: 471 -----SDQQMETEQDQSSEYKTDPSPTVLGVQSIKNETQLKLPAVVSKKWVRGRLVELKQ 525
                S QQ ETEQD+SSE +TD SPTV+G+QS+++ET L    + +KKWVRGRLVE+ +
Sbjct: 358 NQDSQSKQQRETEQDESSEDETDHSPTVMGIQSLEDET-LSSSPIATKKWVRGRLVEVSE 416


>Medtr7g117530.3 | NUMOD3 motif protein | HC |
           chr7:48689940-48685841 | 20130731
          Length = 423

 Score =  264 bits (674), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 164/404 (40%), Positives = 227/404 (56%), Gaps = 41/404 (10%)

Query: 159 HSAERKQKIAAGVKMRWQRRREKMAVQETCCLEWQNLIAQASREGYVDQKELQWNXXXXX 218
           HS E K KI+ GV+  W+ RR +  VQE+CC EWQNLIA+ASR+G+V Q+ELQWN     
Sbjct: 21  HSTETKMKISVGVRKLWEMRRGRKMVQESCCFEWQNLIAEASRQGFVGQEELQWNSYVTL 80

Query: 219 XXXXXXXXXXXXXQRKQMPRAPGSKTTPWTSGQRRKVAEAIS---VDLEYRRKGYTTKAK 275
                        +RKQM R P S   P +  QRRK+AEAI+    D +YR +  +  AK
Sbjct: 81  DEQLKQEWLVSVEERKQMARTPVSNRAPKSPEQRRKIAEAIAAKWADPDYRERVCSAIAK 140

Query: 276 YHDIEGAEMKPRRRPSDDGQ-STRSNTVMEKDPANDISVESRTRILNLISSGNAEFPAFK 334
           YH     E KPR RPS   Q + +   + ++D    I ++S ++I+  I     + PA+K
Sbjct: 141 YH--HSTERKPRTRPSYSAQPTKKKKPITKRDSDTSIVIKSASKIVKPIQLRKRKSPAYK 198

Query: 335 DHLESPKLDMMKSVKAQRGVAETKLNKXXXXXXXXXXXXXXXXXXXXXTEMKSPFAQASL 394
           D L + KL+M+K+++AQR   +T+  +                        KSP AQ+SL
Sbjct: 199 DPLVNSKLEMIKNIRAQRASVDTRQTQAIQQARLLIAEAEKAAKALEVAAAKSPIAQSSL 258

Query: 395 MESRKLIAEAIQSLQSIDTKGITASNVPSVALAMANEENDTEFEVLSQSHMLPINGKKML 454
           +E+RKLIAEAIQSL+SIDT+ I   +VPSV+ +  N+EN++ F+V + S M  +NG   L
Sbjct: 259 IETRKLIAEAIQSLESIDTQKIDDCSVPSVSWSKVNQENESAFDVRNPSEMAQVNGHTTL 318

Query: 455 SSSDYNKFSEDL------------------DKCA---------------SDQQMETEQDQ 481
           S S Y KFSED                   + CA               S QQ ETEQD+
Sbjct: 319 SPSFY-KFSEDFGELSLERPVNGVPELHLTNGCASLPFSLNSQINQDSQSKQQRETEQDE 377

Query: 482 SSEYKTDPSPTVLGVQSIKNETQLKLPAVVSKKWVRGRLVELKQ 525
           SSE +TD SPTV+G+QS+++ET L    + +KKWVRGRLVE+ +
Sbjct: 378 SSEDETDHSPTVMGIQSLEDET-LSSSPIATKKWVRGRLVEVSE 420


>Medtr8g464010.1 | hypothetical protein | HC |
           chr8:22600722-22596106 | 20130731
          Length = 402

 Score = 89.0 bits (219), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 73/121 (60%), Gaps = 3/121 (2%)

Query: 93  DSEGLDEREKLRRMRISKANKGNTPWNKGRKLSKHSAETLRKIKERTRLAMQSPKVKMKL 152
           DS   +++E++RRMRI  ANKG  PWNKGR+   H+AET  +I+ RT  A++ PKVK K+
Sbjct: 75  DSLKSNDKERMRRMRIGLANKGRVPWNKGRQ---HTAETRERIRMRTLEALKDPKVKKKM 131

Query: 153 VNPRNAHSAERKQKIAAGVKMRWQRRREKMAVQETCCLEWQNLIAQASREGYVDQKELQW 212
                 HS + K+KI+  ++  W+ R +     E   L W+  IA A+++G   Q EL W
Sbjct: 132 AEHPRCHSDQIKEKISYSLRRVWEERLKSKRAGEQFFLLWEQNIANAAKKGGSGQDELDW 191

Query: 213 N 213
           +
Sbjct: 192 D 192