Miyakogusa Predicted Gene
- Lj3g3v2531240.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2531240.1 Non Characterized Hit- tr|I1MK92|I1MK92_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.42528
PE,87.89,0,seg,NULL; SUBFAMILY NOT NAMED,NULL;
NULP1-RELATED,Transcription factor 25; Tcf25,Transcription
facto,CUFF.44145.1
(353 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g023750.1 | transcription factor-like protein | HC | chr8:... 578 e-165
>Medtr8g023750.1 | transcription factor-like protein | HC |
chr8:8628425-8633545 | 20130731
Length = 638
Score = 578 bits (1489), Expect = e-165, Method: Compositional matrix adjust.
Identities = 280/334 (83%), Positives = 297/334 (88%), Gaps = 1/334 (0%)
Query: 1 MAEYFKVLGEQQMSADSIARCLYALECAWNPMFTPLQGNCQLKYGHDTNKPIFTALFTHM 60
MAEYFKV+GEQQMS D+IARCLYALECAW+P FTPLQGNCQLKY HDTNKPIFTALFTHM
Sbjct: 288 MAEYFKVVGEQQMSGDTIARCLYALECAWHPTFTPLQGNCQLKYKHDTNKPIFTALFTHM 347
Query: 61 KNLDRRGCHRSALEVCKLLLSLDADDPMGAIFCMDYFALRSEEYAWLEKFSEDYKSDNSI 120
KNLDRRGCHRSALEVCKLLLSLD+DDPMGAIFC+DYF+LRSEEYAWLEKFSE YKSD+SI
Sbjct: 348 KNLDRRGCHRSALEVCKLLLSLDSDDPMGAIFCIDYFSLRSEEYAWLEKFSEAYKSDSSI 407
Query: 121 WLFPNFSYSLAICRFYLEREASKDACIDSDKASSSDLMKQALMLHPSVIKKLVTKVPLKE 180
WL PNFS+SLAICRFYLER AS+DAC+DS K+SSSDLM QALMLHPSVIKKLVTKVPLK+
Sbjct: 408 WLLPNFSFSLAICRFYLERAASEDACVDSKKSSSSDLMTQALMLHPSVIKKLVTKVPLKD 467
Query: 181 RIWTDILKHTFFLSDQTGSPSQDHLISIYVERNYLIWRLPDLQKLLSGAAKLVIETLESN 240
R WTDILKH FF SDQTG PSQDHLI+IYVERNYLIWRLPDLQKLL GAAK V+ETLESN
Sbjct: 468 RAWTDILKHAFFRSDQTGIPSQDHLINIYVERNYLIWRLPDLQKLLIGAAKQVMETLESN 527
Query: 241 KSELTDWACVRKEVFSSEKNEYGHXXXXXXXXXXXXIPPENLQQFMGVPGMREAMQDENQ 300
KSE+ DW+CVRKE FSSEKNEYGH IP ENLQQFMG+P EAM DENQ
Sbjct: 528 KSEVNDWSCVRKEAFSSEKNEYGHLLVSDFSDSVTAIPQENLQQFMGIPRAGEAMLDENQ 587
Query: 301 FANLPGNGHAPPREVANRNALAVLFESMLPWVTY 334
FAN GNGHA PR VANRNALAVLFESMLPWVTY
Sbjct: 588 FANQQGNGHA-PRGVANRNALAVLFESMLPWVTY 620