Miyakogusa Predicted Gene

Lj3g3v2517860.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2517860.2 Non Characterized Hit- tr|A5BUV6|A5BUV6_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,36.97,2e-18,SUBFAMILY NOT NAMED,NULL; BED FINGER-RELATED,NULL;
C2H2 and C2HC zinc fingers,NULL; Hermes dimerisat,CUFF.44128.2
         (239 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g027800.1 | AC transposase, putative | LC | chr6:9753196-9...    78   6e-15
Medtr7g106390.1 | hypothetical protein | LC | chr7:43304641-4330...    74   1e-13
Medtr4g107900.1 | hypothetical protein | LC | chr4:44722346-4472...    74   1e-13
Medtr5g023055.1 | hypothetical protein | LC | chr5:9162851-91631...    68   7e-12
Medtr4g120840.1 | hypothetical protein | HC | chr4:50046505-5004...    67   1e-11

>Medtr6g027800.1 | AC transposase, putative | LC |
           chr6:9753196-9753852 | 20130731
          Length = 113

 Score = 78.2 bits (191), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 6/108 (5%)

Query: 119 NKGTLHGYMPKISEDGLGGTNSVG---YNLEDCRRVLAEFVICDEMSFKVVEGRGFCKMI 175
           N GTL    P   EDG G ++++    +++ +CR+ LA  +I DE+ FK VEG  F   +
Sbjct: 8   NAGTLQ---PLKKEDGKGTSSTLAADNFDVAECRKALARMIIVDELPFKFVEGEKFRYFM 64

Query: 176 NRLEPRFTVPSRVTVARDCYQHFLDEKKKLKSWFINSRIRVCTTTDCW 223
           + ++PRF +PSR+  A+DC+    DEK KL+S F   +       + W
Sbjct: 65  SVVQPRFPIPSRIAAAKDCWDILTDEKHKLRSLFERVKAGFEDGREVW 112


>Medtr7g106390.1 | hypothetical protein | LC |
           chr7:43304641-43305804 | 20130731
          Length = 181

 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 54/84 (64%), Gaps = 1/84 (1%)

Query: 127 MPKISEDGLGGT-NSVGYNLEDCRRVLAEFVICDEMSFKVVEGRGFCKMINRLEPRFTVP 185
           + K  E G G T + V +++E CR+ LA+ +I DE+ FK +EG  F   ++ ++PRF +P
Sbjct: 94  LKKEDETGTGSTLSGVHFDVEACRKALAKMIIVDELPFKFLEGEEFRYFVSVVQPRFPIP 153

Query: 186 SRVTVARDCYQHFLDEKKKLKSWF 209
           SR++VA DC+     EK KL+S F
Sbjct: 154 SRISVAIDCWDILTKEKHKLRSMF 177


>Medtr4g107900.1 | hypothetical protein | LC |
           chr4:44722346-44721183 | 20130731
          Length = 181

 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 36/84 (42%), Positives = 54/84 (64%), Gaps = 1/84 (1%)

Query: 127 MPKISEDGLGGTNS-VGYNLEDCRRVLAEFVICDEMSFKVVEGRGFCKMINRLEPRFTVP 185
           + K  E G G T S V +++E CR+ LA+ +I DE+ FK +EG  F   ++ ++PRF +P
Sbjct: 94  LKKEDETGTGSTLSGVHFDVEACRKALAKMIIVDELPFKFLEGEEFRYFVSVVQPRFPIP 153

Query: 186 SRVTVARDCYQHFLDEKKKLKSWF 209
           SR++VA DC+     EK KL+S F
Sbjct: 154 SRISVAIDCWDILTKEKHKLRSMF 177


>Medtr5g023055.1 | hypothetical protein | LC | chr5:9162851-9163177
           | 20130731
          Length = 108

 Score = 68.2 bits (165), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 3/66 (4%)

Query: 132 EDGLGGTN---SVGYNLEDCRRVLAEFVICDEMSFKVVEGRGFCKMINRLEPRFTVPSRV 188
           EDG G ++   SV +++E CR+ L   +I DE+ FK +EG  FC  ++  +PRF +PSR+
Sbjct: 43  EDGTGTSSTLSSVHFDVEVCRKALVRMIIVDELPFKFLEGEEFCYFMSVGQPRFPIPSRI 102

Query: 189 TVARDC 194
           +VARDC
Sbjct: 103 SVARDC 108


>Medtr4g120840.1 | hypothetical protein | HC |
           chr4:50046505-50047138 | 20130731
          Length = 109

 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/78 (42%), Positives = 48/78 (61%)

Query: 152 LAEFVICDEMSFKVVEGRGFCKMINRLEPRFTVPSRVTVARDCYQHFLDEKKKLKSWFIN 211
           +A  VI  ++ F VVE   F ++   L+P + +PSR TVARDC++ F DEK KL ++F +
Sbjct: 22  IARLVILSKLPFSVVESDRFNRLCKLLQPLWNIPSRRTVARDCFRMFRDEKFKLIAYFKS 81

Query: 212 SRIRVCTTTDCWTSCQNF 229
              ++  T   WTS QNF
Sbjct: 82  DCSKLALTPKVWTSIQNF 99