Miyakogusa Predicted Gene

Lj3g3v2515230.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2515230.2 tr|B2CP02|B2CP02_LOTJA Granule bound starch
synthase Ib OS=Lotus japonicus PE=2 SV=1,100,0,seg,NULL;
Glyco_transf_5,Starch synthase, catalytic domain;
UDP-Glycosyltransferase/glycogen phospho,CUFF.44105.2
         (273 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g024340.2 | granule bound starch synthase | HC | chr8:8933...   481   e-136
Medtr8g024340.1 | granule bound starch synthase | HC | chr8:8933...   481   e-136
Medtr1g078000.2 | granule bound starch synthase I, putative | HC...   446   e-126
Medtr1g078000.1 | granule bound starch synthase I, putative | HC...   446   e-126
Medtr6g012380.1 | granule bound starch synthase | HC | chr6:3736...   154   9e-38
Medtr3g091570.1 | starch synthase 2/amyloplastic protein | HC | ...   148   4e-36
Medtr3g091570.2 | starch synthase 2/amyloplastic protein | HC | ...   132   3e-31
Medtr4g094595.1 | starch synthase IV | HC | chr4:38325533-383339...    53   4e-07

>Medtr8g024340.2 | granule bound starch synthase | HC |
           chr8:8933201-8938403 | 20130731
          Length = 616

 Score =  481 bits (1237), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 224/273 (82%), Positives = 242/273 (88%)

Query: 1   MNLIFLGTEVGPWSKTXXXXXXXXXXXXXXXXXXHRVMTIAPRYDQYKDAWDTSVTIEVK 60
           MNLIF+GTEVGPWSKT                  HRVMTI+PRYDQYKDAWDTSVT+EVK
Sbjct: 90  MNLIFVGTEVGPWSKTGGLGDVLGGLPPVLAANGHRVMTISPRYDQYKDAWDTSVTVEVK 149

Query: 61  VGDKTEKVGFFHCHKRGVDRVFVDHPIFLEKVWGKSGTKLYGPTAGEDYQDNQLRFSLFC 120
           VGD+ EKV FFHC KRGVDRVFVDHPIFLEKVWGK+GTK+YGP  G+DYQDNQLRFSLFC
Sbjct: 150 VGDRKEKVRFFHCFKRGVDRVFVDHPIFLEKVWGKTGTKIYGPATGDDYQDNQLRFSLFC 209

Query: 121 QAALEAPRVLNLTSNKYFSGPYGEDVIFIANDWHTALIPCYLKSMYQSIGIYKNARVVYC 180
           QAALEA RVLNLTSNKYFSGPYGEDVIFIANDWHTALI CYLKSMYQ  GI++NA+VV+C
Sbjct: 210 QAALEAARVLNLTSNKYFSGPYGEDVIFIANDWHTALISCYLKSMYQPNGIFRNAKVVFC 269

Query: 181 IHNIAYQGRFAFADFQLLNLPDQFKSSFDFLDGHVKPVIGRKTNWMKAGILESDLVLTVS 240
           IHNIAYQGRFAFAD+ LLNLPDQFKSSFDF+DG+VKPV+GRK NWMKAGILES  VLTVS
Sbjct: 270 IHNIAYQGRFAFADYSLLNLPDQFKSSFDFIDGYVKPVVGRKINWMKAGILESHRVLTVS 329

Query: 241 PYYAEELVSGPDKGVELDNIIRRTGITGIVNGM 273
           PYYA+ELVSGPDKGVELDNI+RRTG+TGIVNGM
Sbjct: 330 PYYAQELVSGPDKGVELDNILRRTGVTGIVNGM 362


>Medtr8g024340.1 | granule bound starch synthase | HC |
           chr8:8933201-8938399 | 20130731
          Length = 616

 Score =  481 bits (1237), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 224/273 (82%), Positives = 242/273 (88%)

Query: 1   MNLIFLGTEVGPWSKTXXXXXXXXXXXXXXXXXXHRVMTIAPRYDQYKDAWDTSVTIEVK 60
           MNLIF+GTEVGPWSKT                  HRVMTI+PRYDQYKDAWDTSVT+EVK
Sbjct: 90  MNLIFVGTEVGPWSKTGGLGDVLGGLPPVLAANGHRVMTISPRYDQYKDAWDTSVTVEVK 149

Query: 61  VGDKTEKVGFFHCHKRGVDRVFVDHPIFLEKVWGKSGTKLYGPTAGEDYQDNQLRFSLFC 120
           VGD+ EKV FFHC KRGVDRVFVDHPIFLEKVWGK+GTK+YGP  G+DYQDNQLRFSLFC
Sbjct: 150 VGDRKEKVRFFHCFKRGVDRVFVDHPIFLEKVWGKTGTKIYGPATGDDYQDNQLRFSLFC 209

Query: 121 QAALEAPRVLNLTSNKYFSGPYGEDVIFIANDWHTALIPCYLKSMYQSIGIYKNARVVYC 180
           QAALEA RVLNLTSNKYFSGPYGEDVIFIANDWHTALI CYLKSMYQ  GI++NA+VV+C
Sbjct: 210 QAALEAARVLNLTSNKYFSGPYGEDVIFIANDWHTALISCYLKSMYQPNGIFRNAKVVFC 269

Query: 181 IHNIAYQGRFAFADFQLLNLPDQFKSSFDFLDGHVKPVIGRKTNWMKAGILESDLVLTVS 240
           IHNIAYQGRFAFAD+ LLNLPDQFKSSFDF+DG+VKPV+GRK NWMKAGILES  VLTVS
Sbjct: 270 IHNIAYQGRFAFADYSLLNLPDQFKSSFDFIDGYVKPVVGRKINWMKAGILESHRVLTVS 329

Query: 241 PYYAEELVSGPDKGVELDNIIRRTGITGIVNGM 273
           PYYA+ELVSGPDKGVELDNI+RRTG+TGIVNGM
Sbjct: 330 PYYAQELVSGPDKGVELDNILRRTGVTGIVNGM 362


>Medtr1g078000.2 | granule bound starch synthase I, putative | HC |
           chr1:34876696-34871897 | 20130731
          Length = 608

 Score =  446 bits (1148), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 203/273 (74%), Positives = 233/273 (85%)

Query: 1   MNLIFLGTEVGPWSKTXXXXXXXXXXXXXXXXXXHRVMTIAPRYDQYKDAWDTSVTIEVK 60
           MNL+F+G EVGPWSKT                  HRVMT++PRYDQYKDAWDT V++E+K
Sbjct: 82  MNLVFVGAEVGPWSKTGGLGDVLGGLPPVLAGNGHRVMTVSPRYDQYKDAWDTDVSVELK 141

Query: 61  VGDKTEKVGFFHCHKRGVDRVFVDHPIFLEKVWGKSGTKLYGPTAGEDYQDNQLRFSLFC 120
           VGD+ E V FFHC+KRGVDRVFVDHP+FLEKVWGK+ +KLYGP  G DY+DNQLRFSL C
Sbjct: 142 VGDRIETVRFFHCYKRGVDRVFVDHPLFLEKVWGKTESKLYGPKTGTDYKDNQLRFSLLC 201

Query: 121 QAALEAPRVLNLTSNKYFSGPYGEDVIFIANDWHTALIPCYLKSMYQSIGIYKNARVVYC 180
           QAALEAPRVLNL+S+KYFSGPYGEDV+F+ANDWHTAL+PCYLKS+Y+S G+YKNA+V +C
Sbjct: 202 QAALEAPRVLNLSSSKYFSGPYGEDVVFVANDWHTALLPCYLKSLYKSRGLYKNAKVAFC 261

Query: 181 IHNIAYQGRFAFADFQLLNLPDQFKSSFDFLDGHVKPVIGRKTNWMKAGILESDLVLTVS 240
           IHNIAYQGR AF+DF LLNLPD+F+SSFDF+DG+  PV GRK NWMKAGILESD V TVS
Sbjct: 262 IHNIAYQGRHAFSDFALLNLPDEFRSSFDFIDGYTTPVKGRKINWMKAGILESDRVFTVS 321

Query: 241 PYYAEELVSGPDKGVELDNIIRRTGITGIVNGM 273
           P+YAEELVSG D+GVELDNIIR TGITGIVNGM
Sbjct: 322 PHYAEELVSGEDRGVELDNIIRSTGITGIVNGM 354


>Medtr1g078000.1 | granule bound starch synthase I, putative | HC |
           chr1:34876958-34871801 | 20130731
          Length = 608

 Score =  446 bits (1148), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 203/273 (74%), Positives = 233/273 (85%)

Query: 1   MNLIFLGTEVGPWSKTXXXXXXXXXXXXXXXXXXHRVMTIAPRYDQYKDAWDTSVTIEVK 60
           MNL+F+G EVGPWSKT                  HRVMT++PRYDQYKDAWDT V++E+K
Sbjct: 82  MNLVFVGAEVGPWSKTGGLGDVLGGLPPVLAGNGHRVMTVSPRYDQYKDAWDTDVSVELK 141

Query: 61  VGDKTEKVGFFHCHKRGVDRVFVDHPIFLEKVWGKSGTKLYGPTAGEDYQDNQLRFSLFC 120
           VGD+ E V FFHC+KRGVDRVFVDHP+FLEKVWGK+ +KLYGP  G DY+DNQLRFSL C
Sbjct: 142 VGDRIETVRFFHCYKRGVDRVFVDHPLFLEKVWGKTESKLYGPKTGTDYKDNQLRFSLLC 201

Query: 121 QAALEAPRVLNLTSNKYFSGPYGEDVIFIANDWHTALIPCYLKSMYQSIGIYKNARVVYC 180
           QAALEAPRVLNL+S+KYFSGPYGEDV+F+ANDWHTAL+PCYLKS+Y+S G+YKNA+V +C
Sbjct: 202 QAALEAPRVLNLSSSKYFSGPYGEDVVFVANDWHTALLPCYLKSLYKSRGLYKNAKVAFC 261

Query: 181 IHNIAYQGRFAFADFQLLNLPDQFKSSFDFLDGHVKPVIGRKTNWMKAGILESDLVLTVS 240
           IHNIAYQGR AF+DF LLNLPD+F+SSFDF+DG+  PV GRK NWMKAGILESD V TVS
Sbjct: 262 IHNIAYQGRHAFSDFALLNLPDEFRSSFDFIDGYTTPVKGRKINWMKAGILESDRVFTVS 321

Query: 241 PYYAEELVSGPDKGVELDNIIRRTGITGIVNGM 273
           P+YAEELVSG D+GVELDNIIR TGITGIVNGM
Sbjct: 322 PHYAEELVSGEDRGVELDNIIRSTGITGIVNGM 354


>Medtr6g012380.1 | granule bound starch synthase | HC |
           chr6:3736016-3743000 | 20130731
          Length = 758

 Score =  154 bits (389), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 101/275 (36%), Positives = 135/275 (49%), Gaps = 20/275 (7%)

Query: 1   MNLIFLGTEVGPWSKTXXXXXXXXXXXXXXXXXXHRVMTIAPRYDQYKDAWDTSVTIEVK 60
           MN+I +  E  PWSKT                  HRVM +AP Y  Y +A D  V    K
Sbjct: 267 MNIILVAAECAPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEAQDIGVRKRYK 326

Query: 61  VGDKTEKVGFFHCHKRGVDRVFVDHPIFLEKVWGKSGTKLYGPTAGEDYQDNQLRFSLFC 120
           V  +  +V +F  +  GVD VF+D PIF           L     G +  D   R +LFC
Sbjct: 327 VAGQDMEVTYFQTYIDGVDFVFIDSPIF---------QHLESNIYGGNRVDILRRMALFC 377

Query: 121 QAALEAPRVLNLTSNKYFSGPYGEDVIFIANDWHTALIPCYLKSMYQSIGIYKNARVVYC 180
           +AA+E P  +      Y  G    +++FIANDWHTAL+P YLK+ Y+  G+    R V  
Sbjct: 378 KAAVEVPWHVPCGGVCYGDG----NLVFIANDWHTALLPVYLKAYYRDHGLMNYTRSVLV 433

Query: 181 IHNIAYQGRFAFADFQLLNLPDQFKSSFDFLDGHVKPVIGRKTNWMKAGILESDLVLTVS 240
           IHNIA+QGR    DF +++LP  +   F   D    PV G   N   AG+  +D ++TVS
Sbjct: 434 IHNIAHQGRGPLDDFNIVDLPGNYIDLFRMYD----PVGGEHFNIFAAGLKTADRIVTVS 489

Query: 241 PYYAEELVSGPDKGVELDNIIRRTG--ITGIVNGM 273
             YA EL +  + G  L+ II        GIVNG+
Sbjct: 490 HGYAWELKTS-EGGWGLNGIINENDWKFRGIVNGV 523


>Medtr3g091570.1 | starch synthase 2/amyloplastic protein | HC |
           chr3:41674619-41682385 | 20130731
          Length = 655

 Score =  148 bits (374), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 101/289 (34%), Positives = 147/289 (50%), Gaps = 34/289 (11%)

Query: 2   NLIFLGTEVGPWSKTXXXXXXXXXXXXXXXXXXHRVMTIAPRY-------DQYKDAWDTS 54
           N++F+ +E  P+SKT                  HRVM I+PRY        ++  A D  
Sbjct: 142 NIVFVTSEAAPYSKTGGLADVCGSLPIALAGRGHRVMVISPRYIHGTAADSKFSGAVDLG 201

Query: 55  VTIEVKVGDKTEKVGFFHCHKRGVDRVFVDHPIFLEKVWGKSGTKLYGPTAGEDYQDNQL 114
             I V      ++VGFFH ++ GVD VFVDHP F      + G   YG   G  ++DNQ 
Sbjct: 202 SPINVFCFGGAQEVGFFHEYREGVDWVFVDHPSF-----HRPGNP-YGDKHGT-FKDNQF 254

Query: 115 RFSLFCQAALEAPRVLNLTSNKYFSGPYGEDVIFIANDWHTALIPCYLKSMYQSIGIYKN 174
           RF+L   AA EAP VL L     F+  YGE  +F+ NDWH +L+   L S Y+  G+YK+
Sbjct: 255 RFTLLSHAACEAPLVLPLGG---FT--YGEKCLFLVNDWHASLVSVLLASKYRPYGVYKD 309

Query: 175 ARVVYCIHNIAYQGRFAFADFQLLNLPDQFKSSFDFLDGHVKPV--------IGRKTNWM 226
           AR +  IHNIA+QG      +  L LP ++  +     G V P          G   N++
Sbjct: 310 ARSILVIHNIAHQGVEPAITYSNLGLPQEWYGAL----GWVFPTWARTHALDTGEAVNFL 365

Query: 227 KAGILESDLVLTVSPYYAEELVSGPDKGVELDNII--RRTGITGIVNGM 273
           K  I+ +D ++TVS  Y+ E+ +  + G  L  I+  R++ ++GI NG+
Sbjct: 366 KGAIVTADRIVTVSKGYSWEITT-TEGGFGLQEILRDRKSILSGITNGI 413


>Medtr3g091570.2 | starch synthase 2/amyloplastic protein | HC |
           chr3:41675577-41682385 | 20130731
          Length = 478

 Score =  132 bits (332), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 90/253 (35%), Positives = 130/253 (51%), Gaps = 34/253 (13%)

Query: 38  MTIAPRY-------DQYKDAWDTSVTIEVKVGDKTEKVGFFHCHKRGVDRVFVDHPIFLE 90
           M I+PRY        ++  A D    I V      ++VGFFH ++ GVD VFVDHP F  
Sbjct: 1   MVISPRYIHGTAADSKFSGAVDLGSPINVFCFGGAQEVGFFHEYREGVDWVFVDHPSF-- 58

Query: 91  KVWGKSGTKLYGPTAGEDYQDNQLRFSLFCQAALEAPRVLNLTSNKYFSGPYGEDVIFIA 150
               + G   YG   G  ++DNQ RF+L   AA EAP VL L    Y     GE  +F+ 
Sbjct: 59  ---HRPGNP-YGDKHGT-FKDNQFRFTLLSHAACEAPLVLPLGGFTY-----GEKCLFLV 108

Query: 151 NDWHTALIPCYLKSMYQSIGIYKNARVVYCIHNIAYQGRFAFADFQLLNLPDQFKSSFDF 210
           NDWH +L+   L S Y+  G+YK+AR +  IHNIA+QG      +  L LP ++  +   
Sbjct: 109 NDWHASLVSVLLASKYRPYGVYKDARSILVIHNIAHQGVEPAITYSNLGLPQEWYGAL-- 166

Query: 211 LDGHVKPV--------IGRKTNWMKAGILESDLVLTVSPYYAEELVSGPDKGVELDNII- 261
             G V P          G   N++K  I+ +D ++TVS  Y+ E+ +  + G  L  I+ 
Sbjct: 167 --GWVFPTWARTHALDTGEAVNFLKGAIVTADRIVTVSKGYSWEITT-TEGGFGLQEILR 223

Query: 262 -RRTGITGIVNGM 273
            R++ ++GI NG+
Sbjct: 224 DRKSILSGITNGI 236


>Medtr4g094595.1 | starch synthase IV | HC | chr4:38325533-38333942
           | 20130731
          Length = 988

 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 76/172 (44%), Gaps = 30/172 (17%)

Query: 110 QDNQLRFSLFCQAALEAPRVLNLTSNKYFSGPYGEDVIFIANDWHTALIPCYLKSMYQSI 169
           +D+  RFS F + ALE                   D+I   +DW TA +      +Y   
Sbjct: 596 RDDFRRFSYFSRVALEF----------LLQAGKKPDIIH-CHDWQTAFVAPLYWDIYAPK 644

Query: 170 GIYKNARVVYCIHNIAYQGRFAFADFQL-------LNLPDQFKSSFDFLDGHVKPVIGRK 222
           G+  +AR+ +  HN  YQG  A ++ +        LN PD+ + +      H       +
Sbjct: 645 GL-NSARICFTCHNFEYQGTAAASELESCGLDSHHLNRPDRMQDN----SAH------DR 693

Query: 223 TNWMKAGILESDLVLTVSPYYAEELVSGP-DKGVELDNIIRRTGITGIVNGM 273
            N +K G++ S++V TVSP YA+E+ +    KG+            G++NG+
Sbjct: 694 VNSVKGGVVYSNIVTTVSPTYAQEVRTAEGGKGLHSTLSTHSKKFIGVLNGI 745