Miyakogusa Predicted Gene

Lj3g3v2494160.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2494160.1 Non Characterized Hit- tr|I1LTS9|I1LTS9_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,77.42,2e-18,SUBFAMILY
NOT NAMED,NULL; CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE,NULL;
seg,NULL,CUFF.44096.1
         (129 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g085065.1 | Serine/Threonine kinase family protein | HC | ...    88   2e-18
Medtr7g033640.1 | Serine/Threonine kinase family protein | HC | ...    49   1e-06
Medtr8g006870.1 | Serine/Threonine kinase family protein | HC | ...    48   2e-06

>Medtr2g085065.1 | Serine/Threonine kinase family protein | HC |
           chr2:36104614-36110668 | 20130731
          Length = 464

 Score = 88.2 bits (217), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/63 (73%), Positives = 50/63 (79%), Gaps = 1/63 (1%)

Query: 12  PQCHIIPSDLRFSRHLNFGDIHSVYLAELNE-GVLPVMFAAKVMDKKELTSQSKESRAKT 70
           P   I+PSDLRFS  L  GDI SVYLAELN+ G +P MFAAKVMDKKEL S+SKE RAKT
Sbjct: 82  PSRRILPSDLRFSHRLGSGDISSVYLAELNDDGKIPAMFAAKVMDKKELVSRSKEGRAKT 141

Query: 71  ERE 73
           ERE
Sbjct: 142 ERE 144


>Medtr7g033640.1 | Serine/Threonine kinase family protein | HC |
           chr7:12237155-12233226 | 20130731
          Length = 618

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 34/53 (64%), Gaps = 2/53 (3%)

Query: 21  LRFSRHLNFGDIHSVYLAELNEGVLPVMFAAKVMDKKELTSQSKESRAKTERE 73
            R  + L  GDI SVYLAEL+       FA KVM+K EL+S+ K  RA+TERE
Sbjct: 234 FRLLKKLGCGDIGSVYLAELSS--TRTCFAMKVMNKTELSSRKKLPRAQTERE 284


>Medtr8g006870.1 | Serine/Threonine kinase family protein | HC |
           chr8:1038334-1034175 | 20130731
          Length = 771

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/55 (50%), Positives = 34/55 (61%), Gaps = 2/55 (3%)

Query: 19  SDLRFSRHLNFGDIHSVYLAELNEGVLPVMFAAKVMDKKELTSQSKESRAKTERE 73
           S  R  + L  GDI SVYL+EL+       FA KVMDK  L S+ K +RA+TERE
Sbjct: 370 SHFRLLKRLGCGDIGSVYLSELSG--TRCYFAMKVMDKASLASRKKLTRAQTERE 422