Miyakogusa Predicted Gene

Lj3g3v2479900.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2479900.1 Non Characterized Hit- tr|A5BGU5|A5BGU5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,34,1e-16,seg,NULL,CUFF.44082.1
         (205 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g027100.1 | hypothetical protein | HC | chr8:9463815-94609...   201   3e-52

>Medtr8g027100.1 | hypothetical protein | HC | chr8:9463815-9460922
           | 20130731
          Length = 276

 Score =  201 bits (512), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 122/205 (59%), Positives = 146/205 (71%), Gaps = 32/205 (15%)

Query: 1   MKIFNWVHKRFH-NNALKDGFASNIKKTEP-VMNKDSQALLKQVALTDLLGGWKDGILTI 58
           MKIFNWVHKRFH NN L DGFASN+KK EP + N D+QALLKQVALTD+LG WKDGILTI
Sbjct: 1   MKIFNWVHKRFHPNNTLNDGFASNMKKNEPSINNTDNQALLKQVALTDMLGDWKDGILTI 60

Query: 59  GTLGYDPLKSINHNKEYFALEAEHNGQGEGDQVEHNDEENCYNAEHEE-NPLMHTTF-EH 116
           GTLGYDPLKS+N++KEYFALEAE   +     V+ +D EN Y+ E EE NPL++ TF E+
Sbjct: 61  GTLGYDPLKSMNNHKEYFALEAE---KQHDIVVDDDDVENFYDVEQEELNPLINNTFDEN 117

Query: 117 KFEDVVCENHDA---NASSKEE-VVRTFSXXXXXXXXXXXXXXXSNEIVEVPLVITNEVM 172
            FE V+CENHD    +A  +EE ++R F                  EIVEVP +I +E+M
Sbjct: 118 NFEVVICENHDVVDDDARKEEEMIIRNFK-----------------EIVEVPPMICHEIM 160

Query: 173 ESNNVETDQKKMKGERITLADLFLA 197
           E+N+VE DQKK    RITLADLFLA
Sbjct: 161 EANDVEADQKK----RITLADLFLA 181