Miyakogusa Predicted Gene

Lj3g3v2477630.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2477630.1 Non Characterized Hit- tr|Q3AX41|Q3AX41_SYNS9
Putative uncharacterized protein OS=Synechococcus sp. ,32.29,1e-18,no
description,FMN-binding split barrel; PPOX_FMN_cyano: PPOX class
probable FMN-dependent ,Pyridoxa,CUFF.44056.1
         (196 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g027365.1 | pyridoxamine 5'-phosphate oxidase family prote...   360   e-100

>Medtr8g027365.1 | pyridoxamine 5'-phosphate oxidase family protein
           | HC | chr8:9645371-9651432 | 20130731
          Length = 196

 Score =  360 bits (925), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 170/196 (86%), Positives = 181/196 (92%)

Query: 1   MGSVPWKQLLLNALESNAHLKHSSYMQLATVGTNGKPSNRTVVFRGFQDNTDNIQINTDA 60
           MGS+ WKQLLLNALESN HLKH SYMQLATVGTNGKPSNRTVVFRGFQDNTDNI INTD 
Sbjct: 1   MGSIAWKQLLLNALESNTHLKHVSYMQLATVGTNGKPSNRTVVFRGFQDNTDNILINTDT 60

Query: 61  RTRKIEGLKVCSSAEICWYFTDSWEQFRINGNVDIIDGSNPDPLKLQQREKSWFASSLRS 120
           RTRKIE LK+CSSAEICWYFTDSWEQFRING+VDIIDG+NPDPLKLQQREKSWFASSLRS
Sbjct: 61  RTRKIEELKLCSSAEICWYFTDSWEQFRINGHVDIIDGTNPDPLKLQQREKSWFASSLRS 120

Query: 121 RSQYMCPNPGLPCLNEQAQPEISLDPSTGPVDAFCLLILEPDGVDYLNLKNNQRLAFKSR 180
           RSQY+ PNPGLPCLNEQAQ EI LDPS GPVDAFCLL+LEPD VDYLNLK+NQRL F+S 
Sbjct: 121 RSQYLWPNPGLPCLNEQAQIEIMLDPSVGPVDAFCLLVLEPDQVDYLNLKSNQRLTFRSS 180

Query: 181 VGDAAKKSWVMERVNP 196
           + DAA KSW++ERVNP
Sbjct: 181 LTDAANKSWIVERVNP 196