Miyakogusa Predicted Gene
- Lj3g3v2455430.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2455430.1 Non Characterized Hit- tr|F6I6F2|F6I6F2_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,72.82,0,Importin-beta N-terminal domain,Importin-beta, N-terminal;
IMPORTIN-ALPHA RE-EXPORTER (CHROMOSOME SE,CUFF.44050.1
(975 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g027450.1 | importin-alpha re-exporter, putative | HC | ch... 1657 0.0
Medtr6g051660.1 | importin-alpha re-exporter, putative | HC | ch... 1039 0.0
Medtr7g021500.1 | importin-like protein | HC | chr7:6806490-6819... 78 4e-14
Medtr7g021500.2 | importin-like protein | HC | chr7:6806438-6819... 78 4e-14
Medtr0010s0220.1 | importin 9 | HC | scaffold0010:167238-146197 ... 67 9e-11
Medtr1g116957.1 | importin-like protein | HC | chr1:52882908-528... 62 2e-09
>Medtr8g027450.1 | importin-alpha re-exporter, putative | HC |
chr8:9753702-9749040 | 20130731
Length = 969
Score = 1657 bits (4292), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 807/976 (82%), Positives = 886/976 (90%), Gaps = 8/976 (0%)
Query: 1 MKWNPQTLQFLSECFLHTLSPAPEPRRRAESSLADAAAQPNFALAVIRLVAEPSIDEQIR 60
M+WN QTLQFLSECFLHTLSP PEPRR AESSL+ A++QPNFALAV+RLVAEPSI +QIR
Sbjct: 1 MEWNQQTLQFLSECFLHTLSPLPEPRRHAESSLSSASSQPNFALAVLRLVAEPSISDQIR 60
Query: 61 QPAAVTFKNHLRLRWSTDDAPILEPEKEQIKTLIVPLMLSATPKIQAQLSEALAIISNHD 120
Q AAV FKNHLRLRWS +D PIL+ EKEQIKTLIVPLMLSAT KIQ+QLSEALAII NHD
Sbjct: 61 QAAAVNFKNHLRLRWSAEDNPILDSEKEQIKTLIVPLMLSATNKIQSQLSEALAIIGNHD 120
Query: 121 FPKSWPQLLPELISSLQTASQASDYASINGILRTANSIFKKFRFQYKTNDLLLDLKTCLD 180
FPKSWP LLPEL++SLQ SQ SDYASINGIL TANSIFKKFRFQYKTNDLLLDLK CLD
Sbjct: 121 FPKSWPSLLPELVASLQKGSQTSDYASINGILSTANSIFKKFRFQYKTNDLLLDLKYCLD 180
Query: 181 NFARPLLEIFLKTASLIDXXXXXXXXXXX-XLRPLFESQRLCCRIFYSLNFQELPEFFED 239
NFA PLLEIFLKTASL+D L+PLFESQ+LCCRIF+SLNFQELPEFFED
Sbjct: 181 NFAAPLLEIFLKTASLVDAAAAQQPPPPPETLKPLFESQKLCCRIFFSLNFQELPEFFED 240
Query: 240 HMGEWMNQFRKYLTTSYPALEGSGPDGVALVDDLRAAVCENINLYMEKNEEEFQGFLNDF 299
HM EWM +FRKYLTTSYP+LEGS DG+ALVD+LRAAVCENINLYMEKNEEEF+ FLNDF
Sbjct: 241 HMNEWMGEFRKYLTTSYPSLEGSS-DGLALVDELRAAVCENINLYMEKNEEEFKVFLNDF 299
Query: 300 ALAVWTLLGNVSQSSSRDRLAITAIRFLTTVSTSVHHALFAGDGVIPQICQGIVIPNVRL 359
ALAVWTLLGNVSQS+SRD+LA+TAI+FLTTVSTSVHH+LFA DG+IPQICQGIVIPNVRL
Sbjct: 300 ALAVWTLLGNVSQSTSRDQLAVTAIKFLTTVSTSVHHSLFAADGIIPQICQGIVIPNVRL 359
Query: 360 REDDEELFEMNYIEFIRRDMEGSDLDTRRRIACELLKGIATHYGDAVRSIVSAQIQSLLS 419
REDDEELFEMN+IE+IRRDMEGSDLDTRRRIACELLKGIAT YGDAVRSIVSAQ+QSLLS
Sbjct: 360 REDDEELFEMNHIEYIRRDMEGSDLDTRRRIACELLKGIATRYGDAVRSIVSAQVQSLLS 419
Query: 420 SFNANPVANWKDKDCAIYLVVSLATKKAGTSYVSTELVDVPSFFEAVIVPELVIAPEQQR 479
SFNANPVANWKDKDCAIYLVVSL+TKKA T YVST+LVDV SFFE+VIVPEL Q+
Sbjct: 420 SFNANPVANWKDKDCAIYLVVSLSTKKAATGYVSTDLVDVQSFFESVIVPEL-----QKA 474
Query: 480 DVNKHPMLKAGALKFFTMFRTQISKHVALKFFPNLVNFLAAESNVVHSYAASCIEKLLLV 539
DVN++PMLKAGALKFFTMFR+QISK VAL+F P+LV FLAAESNVVHSYAASCIEKLL+V
Sbjct: 475 DVNEYPMLKAGALKFFTMFRSQISKEVALRFLPDLVRFLAAESNVVHSYAASCIEKLLIV 534
Query: 540 KDEGGRARYTSADINPFFEMLMINLFGTFKLPESEENQYVMKCIMRVLGVADITVDVARF 599
KDEGGR RY SADI P F MLM NLF FKLPESEENQYVMKCIMRVLGVADI +DVAR
Sbjct: 535 KDEGGRLRYGSADIAPVFSMLMNNLFSAFKLPESEENQYVMKCIMRVLGVADIQLDVARI 594
Query: 600 CIEGLASLLSEVCKNPKNPIFNHYLFESVAILVRRACERDSSLVSVFETSLFPRLQIILS 659
CIEGL S+LSEVC+NPKNP FNHYLFESVA LV+RA ERD +LVSVFETSLFPRL+IILS
Sbjct: 595 CIEGLGSILSEVCRNPKNPTFNHYLFESVAGLVKRASERDPTLVSVFETSLFPRLEIILS 654
Query: 660 NDVTEFFPYTFQLLAQLVELNRPPIPPLYMQIFEILLSPESWKRASNVPALVRLLQAFLQ 719
NDVTEFFPY FQLL+ LVELNRPPIPP+YMQIFEILLSP+SWKR+++VPALVRLLQAFLQ
Sbjct: 655 NDVTEFFPYAFQLLSLLVELNRPPIPPIYMQIFEILLSPDSWKRSASVPALVRLLQAFLQ 714
Query: 720 KAPNQICQGDRLTKVLGIFDTLIQASSTSEQGFYVLNTVIESLEYDAIKPYISHIWAALF 779
KAPN+I QGDRLTKVLGIFDTLIQASSTS+QGFYVLNTVIESL+YD I PY+SHIWAA+F
Sbjct: 715 KAPNEISQGDRLTKVLGIFDTLIQASSTSDQGFYVLNTVIESLQYDVITPYVSHIWAAIF 774
Query: 780 RELQRRRTSVKLIKSLLIFMSLFLIKHGTSNVVDTMNSVQPGIFTMILNQFWIPNLKLIT 839
RELQR+R SVKL+KSLLIF SLFL+KHG++N+V+TMN+VQP IF+ IL QFWIPNLKLIT
Sbjct: 775 RELQRKR-SVKLLKSLLIFSSLFLVKHGSANLVNTMNAVQPDIFSAILTQFWIPNLKLIT 833
Query: 840 GAIELKLTAVASTRLICESPVLLDPAASASWGKMVDSIVTLLSRPEEDRVEEELDMPDIA 899
G IELKLTAVASTRLICESPVLLDPAASASWGKMVDSIVTLLSR E+DRVEEE DMPDIA
Sbjct: 834 GTIELKLTAVASTRLICESPVLLDPAASASWGKMVDSIVTLLSRQEQDRVEEEPDMPDIA 893
Query: 900 ENVGYTATFVRLYNAGKKEEDPLKDIADPRQFFVASLSQLSTVSPGRYPKVISENVDPAN 959
ENVGYTATFV+LYNAG+ +EDPL DI DPR+FFV+SL+QL PGR+P+VI+ NVDP N
Sbjct: 894 ENVGYTATFVQLYNAGRNQEDPLPDINDPREFFVSSLAQLCAQFPGRFPQVITANVDPVN 953
Query: 960 QSALVQLCNTYNHSIV 975
Q+AL+QLC TYN ++V
Sbjct: 954 QTALLQLCTTYNRALV 969
>Medtr6g051660.1 | importin-alpha re-exporter, putative | HC |
chr6:17986950-17989220 | 20130731
Length = 756
Score = 1039 bits (2687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/736 (71%), Positives = 585/736 (79%), Gaps = 7/736 (0%)
Query: 1 MKWNPQTLQFLSECFLHTLSPAPEPRRRAESSLADAAAQPNFALAVIRLVAEPSIDEQIR 60
M+WNPQT+++L +CFL T+SP E R R ES L++AA NF L ++RLVAEPSID QIR
Sbjct: 1 MEWNPQTVEYLCQCFLQTVSPERESRCRTESHLSEAANHYNFGLFILRLVAEPSIDNQIR 60
Query: 61 QPAAVTFKNHLRLRWSTDDAPILEPEKEQIKTLIVPLMLSATPKIQAQLSEALAIISNHD 120
AAV+FKNHL+LRW + D PILE EKE IKTLIV LMLSAT KIQ+QLSEALAII +HD
Sbjct: 61 LAAAVSFKNHLQLRWLSKDNPILESEKEHIKTLIVSLMLSATAKIQSQLSEALAIIGDHD 120
Query: 121 FPKSWPQLLPELISSLQTASQASDYASINGILRTANSIFKKFRFQYKTNDLLLDLKTCLD 180
FP+ WP LLPELIS+L +SQASDY SINGIL T NSIF+KF KTN LL DLK CLD
Sbjct: 121 FPEYWPSLLPELISNLHKSSQASDYVSINGILTTVNSIFRKFCVNCKTNYLLDDLKYCLD 180
Query: 181 NFARPLLEIFLKTASLIDXXXXXXXXXXXXL-RPLFESQRLCCRIFYSLNFQELPEFFED 239
NFA PLLEIFLKTASLID + RPLFESQ+LCC IF+SLN QELPEFFED
Sbjct: 181 NFAAPLLEIFLKTASLIDAAAVAVPAPAAAIIRPLFESQKLCCWIFHSLNSQELPEFFED 240
Query: 240 HMGEWMNQFRKYLTTSYPALEGSGPDGVALVDDLRAAVCENINLYMEKNEEEFQGFLNDF 299
HM EWM +F KYLT SYP LEG GPDG+ALVD+LR AVCENINLYM K EEEF+ L+ F
Sbjct: 241 HMKEWMTEFGKYLTNSYPFLEGCGPDGLALVDELRVAVCENINLYMVKYEEEFKEHLSGF 300
Query: 300 ALAVWTLLGNVSQSSSRDRLAITAIRFLTTVSTSVHHALFAGDGVIPQICQGIVIPNVRL 359
A VW LL NVSQSS RD+LA+TAI+FLTTVSTSVHHALFA D I ICQGIVIPNV L
Sbjct: 301 AQDVWNLLRNVSQSSGRDQLAVTAIKFLTTVSTSVHHALFAADATILLICQGIVIPNVML 360
Query: 360 REDDEELFEMNYIEFIRRDMEGSDLDTRRRIACELLKGIATHYGDAVRSIVSAQIQSLLS 419
REDDEE FEM+ +E+IR+DMEGSDLDTRRRIAC+LLKGIA HYG AVR IVS QIQSLLS
Sbjct: 361 REDDEEQFEMDPMEYIRKDMEGSDLDTRRRIACDLLKGIAMHYGHAVRQIVSTQIQSLLS 420
Query: 420 SFNANPVANWKDKDCAIYLVVSLATKKAGTSYVSTELVDVPSFFEAVIVPELVIAPEQQR 479
SF NPV NW+ KDCAIYLV+SL+TK AGT YVS LVD SFFE VIVPEL Q
Sbjct: 421 SFAENPVKNWRHKDCAIYLVISLSTKIAGTGYVSIGLVDFQSFFEFVIVPEL-----QSL 475
Query: 480 DVNKHPMLKAGALKFFTMFRTQISKHVALKFFPNLVNFLAAESNVVHSYAASCIEKLLLV 539
DVN + MLKAGALK+FTMF +QISK VAL +LV F+ AESNVVHSYAA CIEKL+LV
Sbjct: 476 DVNGYSMLKAGALKYFTMFLSQISKDVALMILGDLVRFINAESNVVHSYAAICIEKLVLV 535
Query: 540 KDEGGRARYTSADINPFFEMLMINLFGTFKLPESEENQYVMKCIMRVLGVADITVD-VAR 598
K+EGGR Y+SADI P F ML+ NLFGT K ES+ENQYVMKCI+ VLGV DI +D A
Sbjct: 536 KEEGGRQCYSSADIAPIFPMLLNNLFGTLKNAESDENQYVMKCILTVLGVEDIPLDHYAL 595
Query: 599 FCIEGLASLLSEVCKNPKNPIFNHYLFESVAILVRRACERDSSLVSVFETSLFPRLQIIL 658
CIEGL SLLSEV KNP+NPIFN YLFESVAILV+R ERD SLVSVFET LFPR IIL
Sbjct: 596 ICIEGLGSLLSEVSKNPRNPIFNQYLFESVAILVKRGSERDPSLVSVFETRLFPRFDIIL 655
Query: 659 SNDVTEFFPYTFQLLAQLVELNRPPIPPLYMQIFEILLSPESWKRASNVPALVRLLQAFL 718
N VTEF PYTFQLLA LV LNRPPIPP+YMQIFE +LSP WK ++N+PAL+RLLQ FL
Sbjct: 656 KNGVTEFLPYTFQLLALLVGLNRPPIPPIYMQIFECVLSPHFWKSSANIPALLRLLQVFL 715
Query: 719 QKAPNQICQGDRLTKV 734
QKAPN+I Q + L K+
Sbjct: 716 QKAPNEISQVNELNKL 731
>Medtr7g021500.1 | importin-like protein | HC | chr7:6806490-6819824
| 20130731
Length = 1033
Score = 78.2 bits (191), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 113/253 (44%), Gaps = 26/253 (10%)
Query: 18 TLSPAPEPRRRAESSLADAAAQPNFALAVIRLVAEPSIDEQIRQPAAVTFKNHLRLRWST 77
LSP P+ R+ AE +L P + +++++ + + D +RQ A++ FKN + WS
Sbjct: 13 ALSPNPDERKAAEQNLNQFQFAPQHLVRLLQIIVDNNCDMGVRQVASIHFKNFVAKNWSP 72
Query: 78 D---DAPILEPEKEQIKTLIVPLMLSATPKIQAQLSEALAIISNHDFPKSWPQLLPELIS 134
D IL+ +K+ ++ I+ + P ++ QL E L I + D+P+ WP+LL +
Sbjct: 73 DSETQQQILQSDKDLVRDHILMFVTQVPPLLRVQLGECLKTIIHADYPEQWPRLLDWVKH 132
Query: 135 SLQTASQASDYASINGILRTANSIFKKFRFQYKTNDLLLDLKTCLDNFARPLLEIFLKTA 194
+LQ + G L + +K+ F K+++ + +D LL IF +
Sbjct: 133 NLQD-------QQVYGALFVLRILSRKYEF--KSDEERTPVYRIVDETFPHLLNIFSRLV 183
Query: 195 SLIDXXXXXXXXXXXXLRPLFESQRLCCRIFYSLNFQELPEFFEDH--MGEWMNQFRKYL 252
+++ +L C+IF+S + E+P+ D WM F L
Sbjct: 184 QIVNPSLEIADLI-----------KLICKIFWSSIYLEIPKLLFDQNIFNAWMILFLNVL 232
Query: 253 TTSYPALEGSGPD 265
P+ EG D
Sbjct: 233 ERPVPS-EGEPVD 244
>Medtr7g021500.2 | importin-like protein | HC | chr7:6806438-6819834
| 20130731
Length = 1032
Score = 78.2 bits (191), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 113/253 (44%), Gaps = 26/253 (10%)
Query: 18 TLSPAPEPRRRAESSLADAAAQPNFALAVIRLVAEPSIDEQIRQPAAVTFKNHLRLRWST 77
LSP P+ R+ AE +L P + +++++ + + D +RQ A++ FKN + WS
Sbjct: 13 ALSPNPDERKAAEQNLNQFQFAPQHLVRLLQIIVDNNCDMGVRQVASIHFKNFVAKNWSP 72
Query: 78 D---DAPILEPEKEQIKTLIVPLMLSATPKIQAQLSEALAIISNHDFPKSWPQLLPELIS 134
D IL+ +K+ ++ I+ + P ++ QL E L I + D+P+ WP+LL +
Sbjct: 73 DSETQQQILQSDKDLVRDHILMFVTQVPPLLRVQLGECLKTIIHADYPEQWPRLLDWVKH 132
Query: 135 SLQTASQASDYASINGILRTANSIFKKFRFQYKTNDLLLDLKTCLDNFARPLLEIFLKTA 194
+LQ + G L + +K+ F K+++ + +D LL IF +
Sbjct: 133 NLQD-------QQVYGALFVLRILSRKYEF--KSDEERTPVYRIVDETFPHLLNIFSRLV 183
Query: 195 SLIDXXXXXXXXXXXXLRPLFESQRLCCRIFYSLNFQELPEFFEDH--MGEWMNQFRKYL 252
+++ +L C+IF+S + E+P+ D WM F L
Sbjct: 184 QIVNPSLEIADLI-----------KLICKIFWSSIYLEIPKLLFDQNIFNAWMILFLNVL 232
Query: 253 TTSYPALEGSGPD 265
P+ EG D
Sbjct: 233 ERPVPS-EGEPVD 244
>Medtr0010s0220.1 | importin 9 | HC | scaffold0010:167238-146197 |
20130731
Length = 1025
Score = 67.0 bits (162), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 11/151 (7%)
Query: 6 QTLQFLSECFLHTLSPAPEPRRRAESSLADAAAQPNFALAVIRLVAEPSIDEQIRQPAAV 65
Q Q+L C TL P E R AE+SL A+ Q F A+ +++A I +RQ AAV
Sbjct: 7 QDQQWLLSCLSATLDPNHEIRSFAEASLHQASHQSGFGTALSKVIANKDIAVGLRQLAAV 66
Query: 66 TFKNHLRLRWSTDDAPILEP-----EKEQIKTLIVPLMLSATPKIQAQLSEALAIISNHD 120
K ++ W + P EKE I+ +++ + KI + A+A I+ +D
Sbjct: 67 LLKQLVKKHWQEGEESFEPPVVSADEKEIIRRMLLLTLDDPHRKICTAIGMAVASIAVYD 126
Query: 121 FPKSWPQLLPELISSLQTASQASDYASINGI 151
+P+ WP LLP L++ + + + ++NG+
Sbjct: 127 WPELWPDLLPFLLNLINSQT------NLNGV 151
>Medtr1g116957.1 | importin-like protein | HC |
chr1:52882908-52894678 | 20130731
Length = 1027
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 113/260 (43%), Gaps = 42/260 (16%)
Query: 18 TLSPAPEPRRRAESSLADAAAQPNFALAVIRLVAEPSIDEQIRQPAAVTFKNHLRLRWST 77
TLSP P R+ AE L + PN +++++ + D +RQ AA+ FKN + WS+
Sbjct: 11 TLSPNPNERKAAEQRLDEIQYAPNHLPTILQIIVQLDSDISLRQVAAIHFKNFIAKNWSS 70
Query: 78 DDAPILEPEKEQIKTLIVPLMLSATPKIQAQLSEALAIISNHDFPKSWPQLLPELISSLQ 137
I +K+ ++ I+ + ++ QL E L I + D+P P LL + +L
Sbjct: 71 TAHSISFADKDFVRNHILLFLPQLPSLLRVQLGECLKTILHSDYPDHCPNLLDWIKHNLH 130
Query: 138 TASQASDYASINGILRTANSIFKKFRFQYKTND-------LLLDLKTCLDNFARPLLEI- 189
Q Y+++ +LR + ++++K+++ ++ + L N LL+I
Sbjct: 131 --DQQHLYSAL-FVLRILS-----IKYEFKSDEDRTPAYHIIQETFPHLLNIFNTLLQIP 182
Query: 190 --FLKTASLIDXXXXXXXXXXXXLRPLFESQRLCCRIFYSLNFQELPEFFEDH--MGEWM 245
++ A LI +L C+IF+S + E+P+ D WM
Sbjct: 183 NPSIQVADLI---------------------KLICKIFWSSIYLEIPKLLFDLNVFSAWM 221
Query: 246 NQFRKYLTTSYPALEGSGPD 265
F L P LEG D
Sbjct: 222 VLFLNVLERPVP-LEGQPVD 240