Miyakogusa Predicted Gene

Lj3g3v2437560.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2437560.1 Non Characterized Hit- tr|K4CSX9|K4CSX9_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,36.65,3e-18,seg,NULL; Rhodanese/Cell cycle control
phosphatase,Rhodanese-like domain; CHITINASE,NULL; no
descrip,CUFF.43999.1
         (456 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g027835.1 | thylakoid rhodanese-like protein | HC | chr8:1...   601   e-172
Medtr7g080890.1 | rhodanese/cell cycle control phosphatase super...    99   1e-20
Medtr8g011220.1 | hypothetical protein | HC | chr8:2937060-29362...    62   1e-09

>Medtr8g027835.1 | thylakoid rhodanese-like protein | HC |
           chr8:10166016-10171090 | 20130731
          Length = 482

 Score =  601 bits (1549), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 327/479 (68%), Positives = 352/479 (73%), Gaps = 42/479 (8%)

Query: 1   MEALNAAGLTPLSVLSDARKQPRKFSSHPTISACKVSNFSTSTTKKRTFQECLSTGLHGG 60
           MEALN+  LTPLSVLSD  K       HPT  +CK SNFSTS  KK+  +E LS     G
Sbjct: 1   MEALNSTILTPLSVLSDRTKH-----KHPTKFSCKASNFSTSINKKQNLREFLSKNFQKG 55

Query: 61  LILAASVVNSG---IAKALTYEEALGQSMNPKISNSGDFDANGFVESVASFAGENXXXXX 117
           L LAASVVN      A ALTYEEALGQS  P  S  GD D NGFV+SV  FA EN     
Sbjct: 56  LFLAASVVNVNNGEFANALTYEEALGQS--PSASGGGDIDVNGFVDSVIGFATENPVILA 113

Query: 118 XXXXXXXXXXXXSQVLKKPKAWGVESAKNAYVKLGADGSAQLLDIRAPVEIRQVGTPDVG 177
                       SQ+LKKPKAWGVESAKNAY KLGADG+AQLLDIR   EIRQVG P+VG
Sbjct: 114 GGVAILAVPLVLSQILKKPKAWGVESAKNAYAKLGADGNAQLLDIRGLAEIRQVGGPNVG 173

Query: 178 GLKKKPVAIAYKGDDKPGFLKKLSLKFKEPENTTLFVLDKFDGNSELVAELVTLNGFKAA 237
           GLKKK VA+ YKGDDKP FLKKLSLKFKEPENTTLF+LDKFDGNSELVAELVTLNGFK+A
Sbjct: 174 GLKKKAVAVTYKGDDKPVFLKKLSLKFKEPENTTLFILDKFDGNSELVAELVTLNGFKSA 233

Query: 238 YAIKDGAEGPRGWTNSGLPWIAPKKALSLDFGNLTDVINDALGDTSDGLPVTLGIVAATG 297
           YAIKDGAEGP+GW NSGLPW+ PKKALSLDFG+LTD INDA+G+ SDGL VTLGI AATG
Sbjct: 234 YAIKDGAEGPQGWQNSGLPWVEPKKALSLDFGSLTDTINDAIGE-SDGLAVTLGIAAATG 292

Query: 298 LGLLAFSEIETILQLVGSAALVQFASKKLLFAEDRKKTLQQVDEFLTTKVAPKELADEIK 357
           LG+LAFSE+ETILQLVGSAA+VQFASKKLLFAEDRKKTL+QV+EFL TKVAPKEL DEIK
Sbjct: 293 LGVLAFSEVETILQLVGSAAIVQFASKKLLFAEDRKKTLKQVNEFLNTKVAPKELVDEIK 352

Query: 358 QIGKALLPTSTNDKALPAPTEQSPALATAESTVQIAEAAPDTVSEPKVDVVA-------- 409
            IGKALLPTSTNDKALPAPTE  P LATA  TV  AEA P+ V E KV+  A        
Sbjct: 353 DIGKALLPTSTNDKALPAPTENIPELATAGGTVLKAEATPEIVPETKVEAAAEATPEIVP 412

Query: 410 -----------------------ASLAPEINSVPKTEDKAEPVPKQPKSLSPYPYYPDF 445
                                  A  APEINSVPKTE +AE +P QPK LSPYPYYPDF
Sbjct: 413 ETKVEAAAEATPEIVSETKVEASAEPAPEINSVPKTETEAESIPVQPKPLSPYPYYPDF 471


>Medtr7g080890.1 | rhodanese/cell cycle control phosphatase
           superfamily protein, putative | HC |
           chr7:30811415-30815919 | 20130731
          Length = 355

 Score = 98.6 bits (244), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 49/114 (42%), Positives = 72/114 (63%)

Query: 137 KAWGVESAKNAYVKLGADGSAQLLDIRAPVEIRQVGTPDVGGLKKKPVAIAYKGDDKPGF 196
           + +   SA +A+ KL  +  +QLLDIR    ++ +G+P +  + K+ V   +   ++ GF
Sbjct: 141 RKYKFVSAIDAFRKLRDEADSQLLDIRDRKNVKFLGSPSLKMVNKEVVQFEFVEGNEDGF 200

Query: 197 LKKLSLKFKEPENTTLFVLDKFDGNSELVAELVTLNGFKAAYAIKDGAEGPRGW 250
           +KK+  +FK+  NT +FVLD FDGNS  VAEL+  NGFK AYAIK G  G +GW
Sbjct: 201 VKKVLERFKDASNTAVFVLDSFDGNSMKVAELLFKNGFKEAYAIKGGVRGQQGW 254


>Medtr8g011220.1 | hypothetical protein | HC | chr8:2937060-2936298
           | 20130731
          Length = 60

 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/78 (50%), Positives = 47/78 (60%), Gaps = 22/78 (28%)

Query: 252 NSGLP-WIAPKKALSLDFGNLTD-VINDALGDTSDGLPVTLGIVAATGLGLLAFSEIETI 309
           N+ LP WI P +A SL+F NLT  VIN A+ D                     +++IETI
Sbjct: 1   NTYLPSWIQPNQAFSLEFANLTIIVINSAIRDN--------------------YNDIETI 40

Query: 310 LQLVGSAALVQFASKKLL 327
           L+LVGSAALVQFASKKLL
Sbjct: 41  LKLVGSAALVQFASKKLL 58