Miyakogusa Predicted Gene

Lj3g3v2416350.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2416350.2 tr|G7K9G0|G7K9G0_MEDTR Guanine nucleotide-binding
protein alpha-2 subunit OS=Medicago truncatula
GN=,38.71,0.0000000002,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.43990.2
         (280 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g117150.1 | extra-large G-like protein | HC | chr7:4838557...   390   e-109
Medtr0024s0020.1 | extra-large G-like protein | HC | scaffold002...   382   e-106
Medtr5g018510.2 | extra-large GTP-binding protein | HC | chr5:69...    71   9e-13
Medtr5g018510.1 | extra-large GTP-binding protein | HC | chr5:69...    71   9e-13
Medtr8g079010.1 | extra-large GTP-binding protein | HC | chr8:33...    68   1e-11
Medtr5g027970.2 | extra-large GTP-binding protein | HC | chr5:11...    57   3e-08
Medtr5g027970.1 | extra-large GTP-binding protein | HC | chr5:11...    57   3e-08
Medtr5g027970.3 | extra-large GTP-binding protein | HC | chr5:11...    56   5e-08
Medtr5g027970.4 | extra-large GTP-binding protein | HC | chr5:11...    56   5e-08
Medtr1g034300.2 | extra-large GTP-binding protein | HC | chr1:12...    49   4e-06
Medtr1g034300.1 | extra-large GTP-binding protein | HC | chr1:12...    49   4e-06
Medtr6g071360.1 | extra-large GTP-binding protein | HC | chr6:26...    49   4e-06

>Medtr7g117150.1 | extra-large G-like protein | HC |
           chr7:48385575-48389728 | 20130731
          Length = 891

 Score =  390 bits (1002), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 206/283 (72%), Positives = 228/283 (80%), Gaps = 4/283 (1%)

Query: 1   MQKFHSSSHSTSEDVNSPEVLIAPGEVTKSVHQPIEAXXXXXXXXXXXQENVDCSSNIYH 60
           MQ FHSSS STSED NS E +IAP E  KS+H+P              QE VD  SN   
Sbjct: 594 MQSFHSSSPSTSEDENSSEAMIAPREALKSIHRPTTDSLSPPSGSSPLQEYVD-HSNSNR 652

Query: 61  AVNRFGKGNRSSRLDQEKAKIEKNTSRQNSLKQVVLASEMDVHDYSNIGVSQVSRDASQE 120
           AVNRFGKGNRSSR +QEKAK+EK  SRQNSLK+  +A+EMDVHDYSN GVSQ SRDAS+E
Sbjct: 653 AVNRFGKGNRSSRSEQEKAKLEKIASRQNSLKETAVATEMDVHDYSNTGVSQDSRDASRE 712

Query: 121 HDH---NKGGESFFANIIKKGFWDFSQSNKIDDPEKCNVTVNGRPISDHAIKKAEKLAGP 177
           HDH   NKGGESFFANIIKK F DFS+SN+ DD  K NVTVNG+P+SD  +KK EKLAGP
Sbjct: 713 HDHPRSNKGGESFFANIIKKSFRDFSRSNQNDDCGKINVTVNGKPLSDRVVKKTEKLAGP 772

Query: 178 IQPGNYWYDFRAGFWGVMGEPCLGIIPSHIEEFNYPMPDKCAAGNTGVFVNGRELHKKDL 237
           IQPGNYWYDFRAGFWGV+G PCLGIIP  IEEFN+ +P+KC+ GNTGVFVNGRELH+KDL
Sbjct: 773 IQPGNYWYDFRAGFWGVIGGPCLGIIPPFIEEFNHCLPEKCSGGNTGVFVNGRELHQKDL 832

Query: 238 DLLSRRGLPNNRDRSYIIEISGRVLDEDTGEELDSLGKLAPTL 280
           DLLS RGLP +RDRSYIIEISGRVLDEDTGEELD LGKLAPT+
Sbjct: 833 DLLSGRGLPPDRDRSYIIEISGRVLDEDTGEELDCLGKLAPTV 875


>Medtr0024s0020.1 | extra-large G-like protein | HC |
           scaffold0024:7470-1740 | 20130731
          Length = 914

 Score =  382 bits (981), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 201/283 (71%), Positives = 226/283 (79%), Gaps = 5/283 (1%)

Query: 1   MQKFHSSSHSTSEDVNSPEVLIAPGEVTKSVHQPIEAXXXXXXXXXXXQENVDCSSNIYH 60
           MQ FHSSS S SED N PEV+ APGE  KS+ QP +            QE +D SS+  H
Sbjct: 617 MQSFHSSSQSISEDENIPEVMTAPGEAAKSI-QPTKTSVSPPAGSPL-QEYLDYSSSNNH 674

Query: 61  AVNRFGKGNRSSRLDQEKAKIEKNTSRQNSLKQVVLASEMDVHDYSNIGVSQVSRDASQE 120
           AVNR GKGN+S R + EK K+EKNTSRQNSLK+VVLASEMDVHDYSN G+SQ   DASQE
Sbjct: 675 AVNRLGKGNQSGRSEPEKVKLEKNTSRQNSLKEVVLASEMDVHDYSNSGISQDYCDASQE 734

Query: 121 HDH---NKGGESFFANIIKKGFWDFSQSNKIDDPEKCNVTVNGRPISDHAIKKAEKLAGP 177
           HDH   NKGGESFFANI KKG    SQ++K+DD EKC VTVNG+P+SD  +KKAEK+AGP
Sbjct: 735 HDHAGSNKGGESFFANIFKKGSRGSSQADKVDDREKCIVTVNGQPLSDRVVKKAEKIAGP 794

Query: 178 IQPGNYWYDFRAGFWGVMGEPCLGIIPSHIEEFNYPMPDKCAAGNTGVFVNGRELHKKDL 237
           IQPGNYWYD RAGFWGV+G PCLGIIP  IEEFN+P+PDKCA GNTGV VNGRELH+KDL
Sbjct: 795 IQPGNYWYDSRAGFWGVIGGPCLGIIPPFIEEFNHPIPDKCAGGNTGVIVNGRELHQKDL 854

Query: 238 DLLSRRGLPNNRDRSYIIEISGRVLDEDTGEELDSLGKLAPTL 280
           DLL RRGLPN+ DRSYI+EI+GRVLD DTGEELD LGKLAPT+
Sbjct: 855 DLLIRRGLPNDSDRSYIVEITGRVLDVDTGEELDGLGKLAPTV 897


>Medtr5g018510.2 | extra-large GTP-binding protein | HC |
           chr5:6910402-6904444 | 20130731
          Length = 908

 Score = 71.2 bits (173), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 60/107 (56%), Gaps = 7/107 (6%)

Query: 142 FSQSNKIDDPEKCNVTVNGRPISDHAIKKAEKLAGP---IQPGNYWYDFRAGFWGVMGEP 198
           F ++N++     C   VNG+P+S   +   +  + P   ++PGNYWYD  +GFWG  G+ 
Sbjct: 321 FCEANQLPPNYIC---VNGKPLSYEELVTLQNCSNPPKKLKPGNYWYDKVSGFWGKEGQK 377

Query: 199 CLGIIPSHIEEFNYPMPDKCAAGNTGVFVNGRELHKKDLDLLSRRGL 245
              II +H+     P+    + GNT VFVNGRE+ K +L +L   G+
Sbjct: 378 PSSIISAHL-NVGSPIQPDASNGNTQVFVNGREITKVELRMLQLAGV 423


>Medtr5g018510.1 | extra-large GTP-binding protein | HC |
           chr5:6910566-6904338 | 20130731
          Length = 907

 Score = 71.2 bits (173), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 60/107 (56%), Gaps = 7/107 (6%)

Query: 142 FSQSNKIDDPEKCNVTVNGRPISDHAIKKAEKLAGP---IQPGNYWYDFRAGFWGVMGEP 198
           F ++N++     C   VNG+P+S   +   +  + P   ++PGNYWYD  +GFWG  G+ 
Sbjct: 321 FCEANQLPPNYIC---VNGKPLSYEELVTLQNCSNPPKKLKPGNYWYDKVSGFWGKEGQK 377

Query: 199 CLGIIPSHIEEFNYPMPDKCAAGNTGVFVNGRELHKKDLDLLSRRGL 245
              II +H+     P+    + GNT VFVNGRE+ K +L +L   G+
Sbjct: 378 PSSIISAHL-NVGSPIQPDASNGNTQVFVNGREITKVELRMLQLAGV 423


>Medtr8g079010.1 | extra-large GTP-binding protein | HC |
           chr8:33696030-33701682 | 20130731
          Length = 786

 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 4/93 (4%)

Query: 156 VTVNGRPISDHAIKKAEKLAGP---IQPGNYWYDFRAGFWGVMGEPCLGIIPSHIEEFNY 212
           V VNG+ +S   +   +  + P   ++PGNYWYD  +GFWG  G+    II  H+     
Sbjct: 210 VCVNGKSLSFEELVTLQNCSNPPKKLKPGNYWYDKVSGFWGKEGQKPCSIITPHL-NVGG 268

Query: 213 PMPDKCAAGNTGVFVNGRELHKKDLDLLSRRGL 245
           P+    + GNT VF+NGRE+ K +L +L   G+
Sbjct: 269 PITQDASNGNTQVFINGREITKVELRMLQLAGV 301


>Medtr5g027970.2 | extra-large GTP-binding protein | HC |
           chr5:11688213-11683023 | 20130731
          Length = 839

 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 1/87 (1%)

Query: 178 IQPGNYWYDFRAGFWGVMGEPCLGIIPSHIEEFNYPMPDKCAAGNTGVFVNGRELHKKDL 237
           ++PG YWYD  +G WG  GE    II S++  F+  +    + GNT V++NGRE+ K +L
Sbjct: 287 LKPGRYWYDKESGLWGKEGEKPDRIISSNL-NFSGKLSTDASNGNTEVYINGREITKLEL 345

Query: 238 DLLSRRGLPNNRDRSYIIEISGRVLDE 264
            +L    +   RD  + +   GR  +E
Sbjct: 346 RVLRLANVQCPRDTHFWVYDDGRYEEE 372


>Medtr5g027970.1 | extra-large GTP-binding protein | HC |
           chr5:11688958-11683023 | 20130731
          Length = 839

 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 1/87 (1%)

Query: 178 IQPGNYWYDFRAGFWGVMGEPCLGIIPSHIEEFNYPMPDKCAAGNTGVFVNGRELHKKDL 237
           ++PG YWYD  +G WG  GE    II S++  F+  +    + GNT V++NGRE+ K +L
Sbjct: 287 LKPGRYWYDKESGLWGKEGEKPDRIISSNL-NFSGKLSTDASNGNTEVYINGREITKLEL 345

Query: 238 DLLSRRGLPNNRDRSYIIEISGRVLDE 264
            +L    +   RD  + +   GR  +E
Sbjct: 346 RVLRLANVQCPRDTHFWVYDDGRYEEE 372


>Medtr5g027970.3 | extra-large GTP-binding protein | HC |
           chr5:11688958-11683023 | 20130731
          Length = 605

 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 1/87 (1%)

Query: 178 IQPGNYWYDFRAGFWGVMGEPCLGIIPSHIEEFNYPMPDKCAAGNTGVFVNGRELHKKDL 237
           ++PG YWYD  +G WG  GE    II S++  F+  +    + GNT V++NGRE+ K +L
Sbjct: 287 LKPGRYWYDKESGLWGKEGEKPDRIISSNL-NFSGKLSTDASNGNTEVYINGREITKLEL 345

Query: 238 DLLSRRGLPNNRDRSYIIEISGRVLDE 264
            +L    +   RD  + +   GR  +E
Sbjct: 346 RVLRLANVQCPRDTHFWVYDDGRYEEE 372


>Medtr5g027970.4 | extra-large GTP-binding protein | HC |
           chr5:11688213-11683023 | 20130731
          Length = 605

 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 1/87 (1%)

Query: 178 IQPGNYWYDFRAGFWGVMGEPCLGIIPSHIEEFNYPMPDKCAAGNTGVFVNGRELHKKDL 237
           ++PG YWYD  +G WG  GE    II S++  F+  +    + GNT V++NGRE+ K +L
Sbjct: 287 LKPGRYWYDKESGLWGKEGEKPDRIISSNL-NFSGKLSTDASNGNTEVYINGREITKLEL 345

Query: 238 DLLSRRGLPNNRDRSYIIEISGRVLDE 264
            +L    +   RD  + +   GR  +E
Sbjct: 346 RVLRLANVQCPRDTHFWVYDDGRYEEE 372


>Medtr1g034300.2 | extra-large GTP-binding protein | HC |
           chr1:12480364-12475421 | 20130731
          Length = 871

 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 13/111 (11%)

Query: 142 FSQSNKIDDPEKCNVTVNGRPISDHAIKKAEKLAGP---IQPGNYWYDFRAGFWGVMGE- 197
           F ++N+I  P +  V VN  P++   +        P   ++PG+YWYD  +GFWG  G+ 
Sbjct: 290 FCEANQI--PPRL-VQVNLNPLNREELMVLLNCKNPPKELKPGSYWYDKASGFWGKEGQA 346

Query: 198 PCLGIIPSHIEEFNY--PMPDKCAAGNTGVFVNGRELHKKDLDLLSRRGLP 246
           PC  I P    + N    +    + GNT + +N RE+ K +  +L   G+P
Sbjct: 347 PCDIISP----QLNVGGRLQRNASNGNTNITINDREITKNERRILKLAGVP 393


>Medtr1g034300.1 | extra-large GTP-binding protein | HC |
           chr1:12480347-12475421 | 20130731
          Length = 870

 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 13/111 (11%)

Query: 142 FSQSNKIDDPEKCNVTVNGRPISDHAIKKAEKLAGP---IQPGNYWYDFRAGFWGVMGE- 197
           F ++N+I  P +  V VN  P++   +        P   ++PG+YWYD  +GFWG  G+ 
Sbjct: 290 FCEANQI--PPRL-VQVNLNPLNREELMVLLNCKNPPKELKPGSYWYDKASGFWGKEGQA 346

Query: 198 PCLGIIPSHIEEFNY--PMPDKCAAGNTGVFVNGRELHKKDLDLLSRRGLP 246
           PC  I P    + N    +    + GNT + +N RE+ K +  +L   G+P
Sbjct: 347 PCDIISP----QLNVGGRLQRNASNGNTNITINDREITKNERRILKLAGVP 393


>Medtr6g071360.1 | extra-large GTP-binding protein | HC |
           chr6:26415368-26406087 | 20130731
          Length = 878

 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 9/117 (7%)

Query: 156 VTVNGRPISDHAIKKAEKLAGP---IQPGNYWYDFRAGFWGVM-----GEPCLGIIPSHI 207
           + VNGR +    + +    + P   ++PG YWYD  +G WG +     GE    II S +
Sbjct: 301 LVVNGRQLRQEELAEILGCSIPPQKLKPGRYWYDKDSGLWGKVLGFQEGEKPDKIISSKL 360

Query: 208 EEFNYPMPDKCAAGNTGVFVNGRELHKKDLDLLSRRGLPNNRDRSYIIEISGRVLDE 264
                 +  + + GNT V++NGRE+ K +L +L    +   RD  + +   G   +E
Sbjct: 361 -NIGGKLQQEASNGNTRVYMNGREITKIELRMLKLANVQCPRDTHFWVYDDGSYEEE 416