Miyakogusa Predicted Gene
- Lj3g3v2416350.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2416350.1 Non Characterized Hit- tr|I1KHX6|I1KHX6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.17213
PE,60.79,0,seg,NULL; coiled-coil,NULL; DUF3133,Protein of unknown
function DUF3133; SUBFAMILY NOT NAMED,NULL; F,CUFF.43990.1
(840 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr0024s0020.1 | extra-large G-like protein | HC | scaffold002... 957 0.0
Medtr7g117150.1 | extra-large G-like protein | HC | chr7:4838557... 889 0.0
Medtr5g068060.1 | DUF3133 family protein | HC | chr5:28782503-28... 67 9e-11
Medtr5g068060.2 | DUF3133 family protein | HC | chr5:28782470-28... 67 9e-11
Medtr5g068060.4 | DUF3133 family protein | HC | chr5:28782503-28... 67 9e-11
Medtr5g068060.3 | DUF3133 family protein | HC | chr5:28782492-28... 67 9e-11
Medtr3g093780.1 | DUF3133 family protein | HC | chr3:42847107-42... 63 1e-09
Medtr5g018510.2 | extra-large GTP-binding protein | HC | chr5:69... 60 9e-09
Medtr5g018510.1 | extra-large GTP-binding protein | HC | chr5:69... 60 9e-09
Medtr8g079010.1 | extra-large GTP-binding protein | HC | chr8:33... 57 9e-08
>Medtr0024s0020.1 | extra-large G-like protein | HC |
scaffold0024:7470-1740 | 20130731
Length = 914
Score = 957 bits (2474), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/861 (60%), Positives = 601/861 (69%), Gaps = 29/861 (3%)
Query: 1 MEDSGKLRLVGCPNCQNLLPELADYSVYKCGGCGAVLRAGLNGYGNG-SLWEISDEXXXX 59
MEDS KLRLV CP CQN+L E A YS+Y+CGGCGAVLR +N SLWE SDE
Sbjct: 1 MEDSAKLRLVRCPKCQNVLHEQASYSIYQCGGCGAVLRGKVNNGNGNGSLWEASDEGQGG 60
Query: 60 XXXXXXXXXXXXXVVDLSDNSDIDVXXXX--------XXXXXXXXXHVRILNHFEDGDEE 111
V LSDNSD+DV RILN +EDG E+
Sbjct: 61 GVSAKLGSSFRKDVGFLSDNSDVDVKSNAGFSREDQRDSGRLNKERRERILNRYEDGREK 120
Query: 112 GVLENGFDVNRNQDRWGKSLGKEQQEHNSRMGGSKFXXXXX-----XXXXXXXFWRKPSA 166
GV NG+DVN+++D GK++ +EQ E ++GGS F F R PSA
Sbjct: 121 GVPGNGYDVNKSRDEGGKAIRREQHESKFQVGGSNFPRRMSNWPNEERIDMEGFQRYPSA 180
Query: 167 DMEGVRFSNLNYPDEXXXXXXXXXXXXXXEQWRDYKDMDGVSKVQHLEQDRADLLRKLEE 226
D+EGVRFSNLN+P+E EQW +Y+DMDG+S+V+HLEQDRA+LLRKL+E
Sbjct: 181 DIEGVRFSNLNFPNEGTSRFSYNHG----EQWSNYEDMDGMSRVRHLEQDRAELLRKLDE 236
Query: 227 LSMHLNKSSEMVNKPKEKVLPDGKVVPPGPYNGPDAWFRDGPSGLN-RTSRQFIDPNKHM 285
LS L+ SSEMVN PKEK PD K+VPP P GPD F DGPSG + TSRQF PNKH+
Sbjct: 237 LSKQLSNSSEMVNNPKEKGHPDSKMVPPDPRGGPDTRFPDGPSGSDWTTSRQFFGPNKHL 296
Query: 286 ANSPDFNYYHDPYAYNTNGHERAMFD-FHPSIPNPVFIPGYGVPFMSPMMRGPHPLPHQF 344
A P +Y+HDPY Y T+GHE AM + F S+ NP + PGYG PF S M RGPH QF
Sbjct: 297 AGPPYSSYHHDPYGY-TSGHEMAMHNNFQSSMNNPNYFPGYGDPFGSQMSRGPHLSSRQF 355
Query: 345 RQQPIHPYFPGHYAD-GPDSYGPYAHRAMPHPHSCSCFHCYENKRRGSVPAPPAGVINSR 403
QQP+HPYFPG Y D GPDSY Y H PH SCSCFHCY NK RGS+P PPA +NSR
Sbjct: 356 TQQPMHPYFPGRYTDTGPDSYEQYTHNPTPHLPSCSCFHCYNNKIRGSMPVPPATFLNSR 415
Query: 404 FARGTNDPMVYHHEIPGAVGPQIHNSRTSIPAVGFQEKQLHTRRPGDFNSEMGGFVRNSP 463
F +NDPM+Y +EIP AV +HNSRT +P +EKQLHTR DF+SE GGFV
Sbjct: 416 FPHTSNDPMLYRNEIPAAVSQHVHNSRTGVPVANSREKQLHTRLVSDFDSERGGFVTGRS 475
Query: 464 RKVMPAS-RRPCHPIAGGSPFITCYNCFELLQLPKKALVMGKNHQQKVKCGACSTEINFS 522
+KVM AS + CHPIAGGSPFITC+NCFELLQLPKK L KN +QK++CGACS++IN S
Sbjct: 476 QKVMSASGSQRCHPIAGGSPFITCHNCFELLQLPKKVLAKVKNRKQKMRCGACSSDINVS 535
Query: 523 VINKKLVVSFHPEMEETATRIDD-SSIEVVNSCVSHSHGHVNASGVNFSSDDYSGYDFHS 581
+INKKLV S H E+E T TRIDD +SIEVVNS VSHSHGHVN + VNFSSDDYSGYDF S
Sbjct: 536 IINKKLVTSLHGEVEGTTTRIDDDASIEVVNSRVSHSHGHVNTNRVNFSSDDYSGYDFQS 595
Query: 582 VDRESPVLAADPSLSSSKSQEMQKFHSSSHSTSEDVNSPEVLIAPGEVTKSVHQPIEAXX 641
VDR SPV+A+DPSL+SSK QEMQ FHSSS S SED N PEV+ APGE KS+ QP +
Sbjct: 596 VDRGSPVMASDPSLNSSKLQEMQSFHSSSQSISEDENIPEVMTAPGEAAKSI-QPTKTSV 654
Query: 642 XXXXXXXXXQENVDCSSNIYHAVNRFGKGNRSSRLDQEKAKIEKNTSRQNSLKQVVLASE 701
QE +D SS+ HAVNR GKGN+S R + EK K+EKNTSRQNSLK+VVLASE
Sbjct: 655 SPPAGSPL-QEYLDYSSSNNHAVNRLGKGNQSGRSEPEKVKLEKNTSRQNSLKEVVLASE 713
Query: 702 MDVHDYSNIGVSQVSRDASQEHDH---NKGGESFFANIIKKGFWDFSQSNKIDDPEKCNV 758
MDVHDYSN G+SQ DASQEHDH NKGGESFFANI KKG SQ++K+DD EKC V
Sbjct: 714 MDVHDYSNSGISQDYCDASQEHDHAGSNKGGESFFANIFKKGSRGSSQADKVDDREKCIV 773
Query: 759 TVNGRPISDHAIKKAEKLAGPIQPGNYWYDFRAGFWGVMGEPCLGIIPSHIEEFNYPMPD 818
TVNG+P+SD +KKAEK+AGPIQPGNYWYD RAGFWGV+G PCLGIIP IEEFN+P+PD
Sbjct: 774 TVNGQPLSDRVVKKAEKIAGPIQPGNYWYDSRAGFWGVIGGPCLGIIPPFIEEFNHPIPD 833
Query: 819 KCAAGNTGVFVNGWRKQRKDL 839
KCA GNTGV VNG +KDL
Sbjct: 834 KCAGGNTGVIVNGRELHQKDL 854
>Medtr7g117150.1 | extra-large G-like protein | HC |
chr7:48385575-48389728 | 20130731
Length = 891
Score = 889 bits (2296), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/858 (58%), Positives = 583/858 (67%), Gaps = 45/858 (5%)
Query: 1 MEDSGKLRLVGCPNCQNLLPELADYSVYKCGGCGAVLRAGLNGYGNGSLWEISDEXXXXX 60
M DS KLRLV CP C+NLLPELADYSVY+CGGCGAVLRA GY +GSL SDE
Sbjct: 1 MTDSSKLRLVRCPKCENLLPELADYSVYQCGGCGAVLRAKHKGYVSGSL---SDEGKVVG 57
Query: 61 XXXXXXXXXXXXVVDLSDNSDIDVXXXXXXXXXXXXXHVRILNHFEDGDEEGVLENGFDV 120
+VD SD S+++ DE+G EN DV
Sbjct: 58 EGSGKLEKG---LVDFSDTSNVESKSGPSRCDNERGSDKTNEIIPNQSDEKGFFENDIDV 114
Query: 121 NRNQD-RWGKSLGKEQQEHNSRM---GGSKFXXXXX-----XXXXXXXFWRKPSADMEGV 171
NRN D K++ ++Q+E +++ GSKF F RK DME V
Sbjct: 115 NRNNDDEVDKAMERQQEEPKAQIDQENGSKFSGRVSNLQNGEKTYMEGFRRKQRVDMESV 174
Query: 172 RFSNLNYPDEXXXXXXXXXXXXXXEQWRDYKDMDGVSKVQHLEQDRADLLRKLEELSMHL 231
RF + NYPDE E WR+ K+ DG ++VQHLEQDRA+LLRKL+EL L
Sbjct: 175 RFPSSNYPDEGPSNGYSGFSNSYKELWRNDKERDGANRVQHLEQDRAELLRKLDELKHQL 234
Query: 232 NKSSEMVNKPKEKVLPDGKVVPPGP--YNGPDAWFRDGPSGLNRTSRQFIDPNKHMANSP 289
+KSSE+VN PKEK LPD +++PP P + G D WF +GPSGLNRTSRQF P+KHMA P
Sbjct: 235 SKSSEVVNNPKEKFLPDERMIPPDPHPFGGSDPWFPNGPSGLNRTSRQFYGPDKHMAGPP 294
Query: 290 DFNYYHDPYAYNTNGHERAMFDFHPSIPNPVFIPGYGVPFMSPMMRGPHPLPHQFRQQPI 349
N++HDPY Y GHE AM +FHPS+ NP YG PF S ++R PHQF QQP+
Sbjct: 295 HVNFHHDPYPY-IGGHETAMPNFHPSMQNPN---QYGDPFASQLLRRG---PHQFSQQPL 347
Query: 350 HPYFPGHYAD-GPDSYGPYAHR--AMPHPHSCSCFHCYENKRRGSVPAPPAGVINSRFAR 406
HPYFPG Y D PDSY YAH AM H SCSCFHCY+NKRRGSVP PP
Sbjct: 348 HPYFPGRYVDPNPDSYELYAHNNNAMLHQPSCSCFHCYDNKRRGSVPMPPPSF------- 400
Query: 407 GTNDP-MVYHHEIPGAVGPQIHNSRTSIPAVGFQEKQLHTRRPGDFNSEMGGFVRNSPRK 465
NDP M+YHHEIPG G +HNS+ SIP +E QLHTR P DFNSEMGGF RN RK
Sbjct: 401 -PNDPSMLYHHEIPGGYGSHVHNSKASIPPARLRENQLHTRWPSDFNSEMGGFTRNRHRK 459
Query: 466 VMPASR-RPCHPIAGGSPFITCYNCFELLQLPKKALVMGKNHQQKVKCGACSTEINFSVI 524
VM AS R CHP+AGGSPFITC NCFELLQLPKKALV+ +NHQQKV+CGACS+EI+ S+I
Sbjct: 460 VMVASSSRRCHPVAGGSPFITCNNCFELLQLPKKALVLARNHQQKVRCGACSSEISVSLI 519
Query: 525 NKKLVVSFHPEMEETATRIDDSSIEVVNSCVSHSHGHVNASGVNFSSDDYSGYDFHSVDR 584
NKKLV+S H EM+ +R+DDSS EV++S VSH+ G N +G NFSSDDYSGYDF SVD+
Sbjct: 520 NKKLVIS-HSEMKGAPSRVDDSSNEVLSSRVSHTRGLANRNGANFSSDDYSGYDFLSVDK 578
Query: 585 ESPVLAADPSLSSSKSQEMQKFHSSSHSTSEDVNSPEVLIAPGEVTKSVHQPIEAXXXXX 644
E P+ A +L+S+KSQEMQ FHSSS STSED NS E +IAP E KS+H+P
Sbjct: 579 E-PLSAV--ALNSNKSQEMQSFHSSSPSTSEDENSSEAMIAPREALKSIHRPTTDSLSPP 635
Query: 645 XXXXXXQENVDCSSNIYHAVNRFGKGNRSSRLDQEKAKIEKNTSRQNSLKQVVLASEMDV 704
QE VD SN AVNRFGKGNRSSR +QEKAK+EK SRQNSLK+ +A+EMDV
Sbjct: 636 SGSSPLQEYVD-HSNSNRAVNRFGKGNRSSRSEQEKAKLEKIASRQNSLKETAVATEMDV 694
Query: 705 HDYSNIGVSQVSRDASQEHDH---NKGGESFFANIIKKGFWDFSQSNKIDDPEKCNVTVN 761
HDYSN GVSQ SRDAS+EHDH NKGGESFFANIIKK F DFS+SN+ DD K NVTVN
Sbjct: 695 HDYSNTGVSQDSRDASREHDHPRSNKGGESFFANIIKKSFRDFSRSNQNDDCGKINVTVN 754
Query: 762 GRPISDHAIKKAEKLAGPIQPGNYWYDFRAGFWGVMGEPCLGIIPSHIEEFNYPMPDKCA 821
G+P+SD +KK EKLAGPIQPGNYWYDFRAGFWGV+G PCLGIIP IEEFN+ +P+KC+
Sbjct: 755 GKPLSDRVVKKTEKLAGPIQPGNYWYDFRAGFWGVIGGPCLGIIPPFIEEFNHCLPEKCS 814
Query: 822 AGNTGVFVNGWRKQRKDL 839
GNTGVFVNG +KDL
Sbjct: 815 GGNTGVFVNGRELHQKDL 832
>Medtr5g068060.1 | DUF3133 family protein | HC |
chr5:28782503-28777647 | 20130731
Length = 960
Score = 66.6 bits (161), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 62/115 (53%), Gaps = 7/115 (6%)
Query: 470 SRRPCHPIAGGSPFITCYNCFELLQLPKKALVMGKNHQQKVKCGACSTEINFSVINKKLV 529
++R P+AG +PF+TC+ C LLQLP L+ + K+KCGAC + FS+ NK +
Sbjct: 745 TKRHYRPVAGAAPFVTCHKCLNLLQLPADFLLF-RRVCHKLKCGACQKVLKFSLQNKSHI 803
Query: 530 VSFHPEMEETATRIDDSSIEVVNSCVSHSHGHVNASGVNFSSDDYSGYDFHSVDR 584
+S+ P + D + +N + S HV A V++ SDDY HSV +
Sbjct: 804 ISYTPNAVGPPSSDLDMKNKPINGINTQSEPHV-ADRVSY-SDDYG----HSVSK 852
>Medtr5g068060.2 | DUF3133 family protein | HC |
chr5:28782470-28777647 | 20130731
Length = 960
Score = 66.6 bits (161), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 62/115 (53%), Gaps = 7/115 (6%)
Query: 470 SRRPCHPIAGGSPFITCYNCFELLQLPKKALVMGKNHQQKVKCGACSTEINFSVINKKLV 529
++R P+AG +PF+TC+ C LLQLP L+ + K+KCGAC + FS+ NK +
Sbjct: 745 TKRHYRPVAGAAPFVTCHKCLNLLQLPADFLLF-RRVCHKLKCGACQKVLKFSLQNKSHI 803
Query: 530 VSFHPEMEETATRIDDSSIEVVNSCVSHSHGHVNASGVNFSSDDYSGYDFHSVDR 584
+S+ P + D + +N + S HV A V++ SDDY HSV +
Sbjct: 804 ISYTPNAVGPPSSDLDMKNKPINGINTQSEPHV-ADRVSY-SDDYG----HSVSK 852
>Medtr5g068060.4 | DUF3133 family protein | HC |
chr5:28782503-28777647 | 20130731
Length = 960
Score = 66.6 bits (161), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 62/115 (53%), Gaps = 7/115 (6%)
Query: 470 SRRPCHPIAGGSPFITCYNCFELLQLPKKALVMGKNHQQKVKCGACSTEINFSVINKKLV 529
++R P+AG +PF+TC+ C LLQLP L+ + K+KCGAC + FS+ NK +
Sbjct: 745 TKRHYRPVAGAAPFVTCHKCLNLLQLPADFLLF-RRVCHKLKCGACQKVLKFSLQNKSHI 803
Query: 530 VSFHPEMEETATRIDDSSIEVVNSCVSHSHGHVNASGVNFSSDDYSGYDFHSVDR 584
+S+ P + D + +N + S HV A V++ SDDY HSV +
Sbjct: 804 ISYTPNAVGPPSSDLDMKNKPINGINTQSEPHV-ADRVSY-SDDYG----HSVSK 852
>Medtr5g068060.3 | DUF3133 family protein | HC |
chr5:28782492-28777647 | 20130731
Length = 960
Score = 66.6 bits (161), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 62/115 (53%), Gaps = 7/115 (6%)
Query: 470 SRRPCHPIAGGSPFITCYNCFELLQLPKKALVMGKNHQQKVKCGACSTEINFSVINKKLV 529
++R P+AG +PF+TC+ C LLQLP L+ + K+KCGAC + FS+ NK +
Sbjct: 745 TKRHYRPVAGAAPFVTCHKCLNLLQLPADFLLF-RRVCHKLKCGACQKVLKFSLQNKSHI 803
Query: 530 VSFHPEMEETATRIDDSSIEVVNSCVSHSHGHVNASGVNFSSDDYSGYDFHSVDR 584
+S+ P + D + +N + S HV A V++ SDDY HSV +
Sbjct: 804 ISYTPNAVGPPSSDLDMKNKPINGINTQSEPHV-ADRVSY-SDDYG----HSVSK 852
>Medtr3g093780.1 | DUF3133 family protein | HC |
chr3:42847107-42851695 | 20130731
Length = 871
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 63/148 (42%), Gaps = 17/148 (11%)
Query: 432 SIPAVGFQEKQLHTRRPG----------------DFNSEMGGFVRNSPRKVMPASRRPCH 475
S P V FQ + L+ P +F VR R ++R
Sbjct: 602 SSPRVHFQHEDLYRSYPAQNCCPSSPQCFSETNSEFQRHRASVVRKYLRDKHNLAKRHHK 661
Query: 476 PIAGGSPFITCYNCFELLQLPKKALVMGKNHQQKVKCGACSTEINFSVINKKLVVSFHPE 535
P+AGG+PF+TC+ C LLQLP L+ K K+KCG CS + FS+ N VV F
Sbjct: 662 PVAGGAPFVTCHKCSNLLQLPADFLLY-KRVCHKLKCGKCSEVLKFSLKNGSHVVPFSSN 720
Query: 536 MEETATRIDDSSIEVVNSCVSHSHGHVN 563
+R EV++ S HVN
Sbjct: 721 TIGLPSRELHRRSEVISGSNIPSVSHVN 748
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 26/34 (76%)
Query: 6 KLRLVGCPNCQNLLPELADYSVYKCGGCGAVLRA 39
K+R+V CP C+ LLPE YSVYKCGGCG L+A
Sbjct: 8 KIRIVKCPKCRQLLPEPQGYSVYKCGGCGTDLQA 41
>Medtr5g018510.2 | extra-large GTP-binding protein | HC |
chr5:6910402-6904444 | 20130731
Length = 908
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 758 VTVNGRPISDHAIKKAEKLAGP---IQPGNYWYDFRAGFWGVMGEPCLGIIPSHIEEFNY 814
+ VNG+P+S + + + P ++PGNYWYD +GFWG G+ II +H+
Sbjct: 332 ICVNGKPLSYEELVTLQNCSNPPKKLKPGNYWYDKVSGFWGKEGQKPSSIISAHL-NVGS 390
Query: 815 PMPDKCAAGNTGVFVNGWRKQRKDL 839
P+ + GNT VFVNG + +L
Sbjct: 391 PIQPDASNGNTQVFVNGREITKVEL 415
>Medtr5g018510.1 | extra-large GTP-binding protein | HC |
chr5:6910566-6904338 | 20130731
Length = 907
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 758 VTVNGRPISDHAIKKAEKLAGP---IQPGNYWYDFRAGFWGVMGEPCLGIIPSHIEEFNY 814
+ VNG+P+S + + + P ++PGNYWYD +GFWG G+ II +H+
Sbjct: 332 ICVNGKPLSYEELVTLQNCSNPPKKLKPGNYWYDKVSGFWGKEGQKPSSIISAHL-NVGS 390
Query: 815 PMPDKCAAGNTGVFVNGWRKQRKDL 839
P+ + GNT VFVNG + +L
Sbjct: 391 PIQPDASNGNTQVFVNGREITKVEL 415
>Medtr8g079010.1 | extra-large GTP-binding protein | HC |
chr8:33696030-33701682 | 20130731
Length = 786
Score = 56.6 bits (135), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 758 VTVNGRPISDHAIKKAEKLAGP---IQPGNYWYDFRAGFWGVMGEPCLGIIPSHIEEFNY 814
V VNG+ +S + + + P ++PGNYWYD +GFWG G+ II H+
Sbjct: 210 VCVNGKSLSFEELVTLQNCSNPPKKLKPGNYWYDKVSGFWGKEGQKPCSIITPHL-NVGG 268
Query: 815 PMPDKCAAGNTGVFVNGWRKQRKDL 839
P+ + GNT VF+NG + +L
Sbjct: 269 PITQDASNGNTQVFINGREITKVEL 293