Miyakogusa Predicted Gene

Lj3g3v2389770.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2389770.1 Non Characterized Hit- tr|A8MR59|A8MR59_ARATH
Uncharacterized protein OS=Arabidopsis thaliana
GN=At2,72.13,2e-18,DUF2996,Protein of unknown function DUF2996;
seg,NULL,CUFF.43957.1
         (213 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g028100.1 | DUF2996 family protein | HC | chr8:10435872-10...   246   8e-66

>Medtr8g028100.1 | DUF2996 family protein | HC |
           chr8:10435872-10433190 | 20130731
          Length = 212

 Score =  246 bits (629), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 135/213 (63%), Positives = 142/213 (66%), Gaps = 1/213 (0%)

Query: 1   MQMAISLRGGALGDPSFRLCSLNSTSSLHXXXXXXXXXXXXXXXXXXLIACKIKTASRSK 60
           MQMA+ LRGGALGD SFRLCSL STSS                    LIA + K  SR+K
Sbjct: 1   MQMALLLRGGALGDSSFRLCSLTSTSSSLHVFQNVVIPNSTSSPILPLIASRFKAVSRNK 60

Query: 61  IICSAVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPQMMEEDVIPSLKEI 120
           I CSAVQ                                     LPQMMEEDVIPSLK I
Sbjct: 61  ITCSAVQESSTSTSATAETKEEVKEEAPKAAAVKKTPAKAPVKPLPQMMEEDVIPSLKAI 120

Query: 121 FEAQEDLSDIELVFQDNKLEGSFLKKGNPYLFWAFFPTGNLTGPKGFSISSYNSGASTVE 180
            EAQ+DLSDIELVFQDNKLEGSFLKKGNPY FWAFFPTG LTGPKGFS+SSYNSGASTVE
Sbjct: 121 LEAQQDLSDIELVFQDNKLEGSFLKKGNPYSFWAFFPTG-LTGPKGFSLSSYNSGASTVE 179

Query: 181 PFLVDEKKITAKHIVFWVEKRLAAQGIIPVWKD 213
           PFLVDEKK+ +K IVFWVEKRLAAQGIIPVWKD
Sbjct: 180 PFLVDEKKVNSKLIVFWVEKRLAAQGIIPVWKD 212