Miyakogusa Predicted Gene

Lj3g3v2385410.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2385410.1 tr|B9P7R2|B9P7R2_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_793382 PE=4
SV=1,39.67,0.000000001,Chaperone J-domain,Heat shock protein DnaJ,
N-terminal; DNAJ_2,Heat shock protein DnaJ, N-terminal; ,CUFF.43944.1
         (165 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g094275.1 | chaperone DnaJ domain protein | HC | chr4:3759...   147   5e-36
Medtr2g008540.1 | chaperone DnaJ domain protein | HC | chr2:1530...    92   2e-19
Medtr2g008520.1 | chaperone DnaJ domain protein | HC | chr2:1516...    92   2e-19
Medtr8g081620.1 | chaperone DnaJ domain protein | HC | chr8:3522...    51   4e-07

>Medtr4g094275.1 | chaperone DnaJ domain protein | HC |
           chr4:37592734-37593635 | 20130731
          Length = 179

 Score =  147 bits (370), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 95/166 (57%), Positives = 116/166 (69%), Gaps = 23/166 (13%)

Query: 19  FPHSSKQQRTFLVNFA-ISCRGATKLKEETTHG-NLYKVLSLKPGSA-MDEIKRAY---- 71
           F H SKQ R   V+FA ISCR ATKL EET +G N YK+LS+ P SA M++IKRAY    
Sbjct: 18  FHHLSKQLRPSHVHFATISCR-ATKLVEETKNGSNFYKMLSVNPKSATMEDIKRAYRSMA 76

Query: 72  -------SHDPSMKEESTKMFVQLNEAYKTLSNPLLREQYDSELGFR---SEMNINVSDE 121
                   HDPSMKEESTK+FV+LN AY+TLSNP+LREQYDSELG R      N  V++E
Sbjct: 77  LQYHPDVCHDPSMKEESTKIFVRLNAAYETLSNPMLREQYDSELGLRNNMMNNNNIVNEE 136

Query: 122 GLRSMWQEQVVHDMNMKTKSRRRMGQKGGSW--SSRMKTQNMENKN 165
             RS WQEQVV    +K +S RRM Q+G SW  +SRM+TQ+M+++N
Sbjct: 137 IWRSRWQEQVV---ELKKRSNRRMEQRGRSWGSTSRMRTQSMKDRN 179


>Medtr2g008540.1 | chaperone DnaJ domain protein | HC |
           chr2:1530763-1530220 | 20130731
          Length = 173

 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/140 (45%), Positives = 79/140 (56%), Gaps = 31/140 (22%)

Query: 19  FPHSSKQQRTFLVNFAISCRGATKLK---EETTHGNLYKVLSLKPGSA-MDEIKRAY--- 71
            P SS+Q R   + F++SCR    +    E    GNLYK+L L P SA MD+IKRAY   
Sbjct: 23  LPLSSRQPR---MQFSVSCRATKNVPIHNELNDDGNLYKILCLSPKSATMDDIKRAYRTM 79

Query: 72  --------SHDPSMKEESTKMFVQLNEAYKTLSNPLLREQYDSELGFRSEMNINVSDEGL 123
                    HD   KEESTKMFVQLN AY+TLSNP L+E+YD EL             GL
Sbjct: 80  ALQYHPDVCHDRLKKEESTKMFVQLNAAYETLSNPKLKEEYDFELSL-----------GL 128

Query: 124 -RSMWQEQVVHDMNMKTKSR 142
            RS   EQ+V ++N ++ +R
Sbjct: 129 RRSRLMEQMV-ELNRRSHTR 147


>Medtr2g008520.1 | chaperone DnaJ domain protein | HC |
           chr2:1516532-1515990 | 20130731
          Length = 173

 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/140 (45%), Positives = 79/140 (56%), Gaps = 31/140 (22%)

Query: 19  FPHSSKQQRTFLVNFAISCRGATKLK---EETTHGNLYKVLSLKPGSA-MDEIKRAY--- 71
            P SS+Q R   + F++SCR    +    E    GNLYK+L L P SA MD+IKRAY   
Sbjct: 23  LPLSSRQPR---MQFSVSCRATKNVPIHNELNDDGNLYKILCLSPKSATMDDIKRAYRTM 79

Query: 72  --------SHDPSMKEESTKMFVQLNEAYKTLSNPLLREQYDSELGFRSEMNINVSDEGL 123
                    HD   KEESTKMFVQLN AY+TLSNP L+E+YD EL             GL
Sbjct: 80  ALQYHPDVCHDRLKKEESTKMFVQLNAAYETLSNPKLKEEYDFELSL-----------GL 128

Query: 124 -RSMWQEQVVHDMNMKTKSR 142
            RS   EQ+V ++N ++ +R
Sbjct: 129 RRSRLMEQMV-ELNRRSHTR 147


>Medtr8g081620.1 | chaperone DnaJ domain protein | HC |
           chr8:35221726-35218003 | 20130731
          Length = 193

 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 23/131 (17%)

Query: 51  NLYKVLSLKPGSAMDEIKRAYSH----------DPSMKEESTKMFVQLNEAYKTLSNPLL 100
           + Y +L +    ++ +IK AY             P   EE TK F+Q+ EAY+TLS+P  
Sbjct: 60  SFYDLLGIPESGSLMDIKSAYKQLARKYHPDVSPPDRVEEYTKRFIQVQEAYETLSDPSR 119

Query: 101 REQYDSE------LGFRSEMNINVSDE------GLRSMWQEQVVHDMNMKTKSRRRMGQK 148
           R  YD +      L F +    N SD+        +S WQ Q +  +  ++ S+   G +
Sbjct: 120 RIMYDRDMARGIHLAFNARKCYNHSDQVSEQKGEWKSRWQSQ-LDGLKRRSDSKVMDGAE 178

Query: 149 GGSWSSRMKTQ 159
             SW++R++ Q
Sbjct: 179 NTSWAARIRQQ 189